BAC Information

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BAC

Clone NameB6Ng01-197J14
Chromosome14 (Build37)
Map Location 92,453,734 - 92,622,255
singlet/doubletdoublet
Overlap geneEG665377
Upstream geneEG639558
Downstream geneLOC638252, Pcdh9, LOC668566
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197J14.bB6Ng01-197J14.g
ACCGA019419GA019420
length918876
definitionB6Ng01-197J14.b B6Ng01-197J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,621,349 - 92,622,255)(92,453,734 - 92,454,562)
sequence
gaattccccacccctaagccctttaccccataaaaaccactagcttttga
gcctcagggtcaaatccactgtctcctgcgtgagatactttctactggag
ctccgtcattaaactacctcatgtgtttacatcaagagggtctcttgtgt
ttctttgggtgcacactgaatcaggaattgagtggggggttccccactgg
tttctttcagtagaagatggtaatgtagcagtagatcatcccaatcgagg
tgtacaatatgtacccatattaactaagttgtgttttcattgccagggca
tatttgggatggagagatttactgcaacaacacacaggaaagcaaaagat
taaaaatgagatttaactggatcttagtacaatatacgacaaacacgtga
cattgaaaggatgtacaacatcaataatcatggggaattaagagggggaa
ggaatatcactaaaaagcatctacaactctagaaagaataactcccatta
aggagacatgagacaatacatgctctgttgtagaaaatgcatactgttgt
tacaaaatgagctttatagggttgatatgaaaaacactatgcagattcct
cagaaaatgaaaagatattgtaaagcaagaatcaatatagtcagtaataa
aagtatcatgtatggaataaaagaaatgacctcagcaactgggcctaacc
ttttacttccctattcactgcaacatcacatggaaggcccccaaatactc
aaaggaattgaaatatcctttctgtgggcagatgtaagcatacatttttg
tcagtgtttgtataacaagtgcacacaatttgttccacattttatttggg
atgttatttaacttttcaatgtgttggtattatcacaatagttttggatt
aaatctgggaagacacta
gaattcctcctcctatcagttttcttttgtgccctgtttcattccccttt
tatctcatacatatacaagaagttgtgtgcatctgctgaaaattctaggg
ttaaaatgaaagaaaacatgatacgtgtctttctaagtttgattttgcta
aatatgatgttccctcgctccacttccttaaatctattgtctagcaaaca
acatcatttcattcatctttatggctgaataaaaacattttgtgaaaatc
aaccagcattgctttatccatttgcccagtaaaagctgcggtagatgacc
tctcgaaggtttgctctttctctctttctttcttttcttattttttattt
tatttttttaactttatttatttatttacttatttgcactccatatttta
ttccctttcccctttcacactccgactgttccacatgccatacctcttcc
ccagctcactgtctctatgtggatatccccattccctgcctcacatgacc
tttaaactccctggggcctccagtctcttgagggtcaggtgtgtcgtctc
tgaatgaacacagacctagctgtcctctactgtatgtgtgttgggggcct
tatatcagctggtgtatgctgcctggttggtggtccagtgtttgagagat
cttaggggtccagatttaattgagactgctggtaactcatacacagtcac
cccttctcctcatcttcttttcagtctttccctaattcaacaacgggggg
ggtcagcagttttctgtctatggtttggatgcaaatatctgcatctgagt
atttcaactgcttgttggtcttctgggggtgtggtcatgctaggtccctt
ttttttgtgagcactcaatagcctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_92621349_92622255
seq2: B6Ng01-197J14.b_49_966 (reverse)

seq1  TAGTGTCTT-CCAGATTT-ATCC-AAACTATTGTGATAATACCAACACAT  47
      ||||||||| |||||||| |||| ||||||||||||||||||||||||||
seq2  TAGTGTCTTCCCAGATTTAATCCAAAACTATTGTGATAATACCAACACAT  50

seq1  TGGAAAGCTGAATAACAT-CCAAAT-AAATGTGGAAC-AATTGTGTGCAC  94
      || |||| | |||||||| |||||| ||||||||||| ||||||||||||
seq2  TGAAAAGTTAAATAACATCCCAAATAAAATGTGGAACAAATTGTGTGCAC  100

seq1  TTGTTATACAAACACTGAC-AAAATGTATGCTTACATCTGCCCACAG-AA  142
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  TTGTTATACAAACACTGACAAAAATGTATGCTTACATCTGCCCACAGAAA  150

seq1  GGATATTTCAATTCC-TTGAGTATTT-GGGGCCTTCCATGTGATGTTGCA  190
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  GGATATTTCAATTCCTTTGAGTATTTGGGGGCCTTCCATGTGATGTTGCA  200

seq1  GTGAATAGGGAAGT-AAAGGTTAGGCCCAGTTGCTGAGGTCATTTCTTTT  239
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTGAATAGGGAAGTAAAAGGTTAGGCCCAGTTGCTGAGGTCATTTCTTTT  250

seq1  ATTCCATACATGATACTTTTATTACTGACTATATTGATTCTTGCTTTACA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATACATGATACTTTTATTACTGACTATATTGATTCTTGCTTTACA  300

seq1  ATATCTTTTCATTTTCTGAGGAATCTGCATAGTGTTTTTCATATCAACCC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTTCATTTTCTGAGGAATCTGCATAGTGTTTTTCATATCAACCC  350

seq1  TATAAAGCTCATTTTGTAACAACAGTATGCATTTTCTACAACAGAGCATG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGCTCATTTTGTAACAACAGTATGCATTTTCTACAACAGAGCATG  400

seq1  TATTGTCTCATGTCTCCTTAATGGGAGTTATTCTTTCTAGAGTTGTAGAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTCATGTCTCCTTAATGGGAGTTATTCTTTCTAGAGTTGTAGAT  450

seq1  GCTTTTTAGTGATATTCCTTCCCCCTCTTAATTCCCCATGATTATTGATG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTAGTGATATTCCTTCCCCCTCTTAATTCCCCATGATTATTGATG  500

seq1  TTGTACATCCTTTCAATGTCACGTGTTTGTCGTATATTGTACTAAGATCC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACATCCTTTCAATGTCACGTGTTTGTCGTATATTGTACTAAGATCC  550

seq1  AGTTAAATCTCATTTTTAATCTTTTGCTTTCCTGTGTGTTGTTGCAGTAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATCTCATTTTTAATCTTTTGCTTTCCTGTGTGTTGTTGCAGTAA  600

seq1  ATCTCTCCATCCCAAATATGCCCTGGCAATGAAAACACAACTTAGTTAAT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCATCCCAAATATGCCCTGGCAATGAAAACACAACTTAGTTAAT  650

seq1  ATGGGTACATATTGTACACCTCGATTGGGATGATCTACTGCTACATTACC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTACATATTGTACACCTCGATTGGGATGATCTACTGCTACATTACC  700

seq1  ATCTTCTACTGAAAGAAACCAGTGGGGAACCCCCCACTCAATTCCTGATT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTACTGAAAGAAACCAGTGGGGAACCCCCCACTCAATTCCTGATT  750

seq1  CAGTGTGCACCCAAAGAAACACAAGAGACCCTCTTGATGTAAACACATGA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGCACCCAAAGAAACACAAGAGACCCTCTTGATGTAAACACATGA  800

seq1  GGTAGTTTAATGACGGAGCTCCAGTAGAAAGTATCTCACGCAGGAGACAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTTAATGACGGAGCTCCAGTAGAAAGTATCTCACGCAGGAGACAG  850

seq1  TGGATTTGACCCTGAGGCTCAAAAGCTAGTGGTTTTTATGGGGTAAAGGG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTGACCCTGAGGCTCAAAAGCTAGTGGTTTTTATGGGGTAAAGGG  900

seq1  CTTAGGGGTGGGGAATTC  907
      ||||||||||||||||||
seq2  CTTAGGGGTGGGGAATTC  918

seq1: chr14_92453734_92454562
seq2: B6Ng01-197J14.g_69_906

seq1  GAATTCCTCCTCCTATCAGTTTTCTTTTGTGCCCTGTTTCATTCCCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTCCTATCAGTTTTCTTTTGTGCCCTGTTTCATTCCCCTTT  50

seq1  TATCTCATACATATACAAGAAGTTGTGTGCATCTGCTGAAAATTCTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCATACATATACAAGAAGTTGTGTGCATCTGCTGAAAATTCTAGGG  100

seq1  TTAAAATGAAAGAAAACATGATACGTGTCTTTCTAAGTTTGATTTTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGAAAGAAAACATGATACGTGTCTTTCTAAGTTTGATTTTGCTA  150

seq1  AATATGATGTTCCCTCGCTCCACTTCCTTAAATCTATTGTCTAGCAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATGTTCCCTCGCTCCACTTCCTTAAATCTATTGTCTAGCAAACA  200

seq1  ACATCATTTCATTCATCTTTATGGCTGAATAAAAACATTTTGTGAAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATTTCATTCATCTTTATGGCTGAATAAAAACATTTTGTGAAAATC  250

seq1  AACCAGCATTGCTTTATCCATTTGCCCAGTAAAAGCTGCGGTAGATGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCATTGCTTTATCCATTTGCCCAGTAAAAGCTGCGGTAGATGACC  300

seq1  TCTCGAAGGTTTGCTCTTTCTCTCTTTCTTTCTTTTCTTATTTTTTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGAAGGTTTGCTCTTTCTCTCTTTCTTTCTTTTCTTATTTTTTATTT  350

seq1  TATTTTTTTAACTTTATTTATTTATTTACTTATTTGCACTCCATATTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAACTTTATTTATTTATTTACTTATTTGCACTCCATATTTTA  400

seq1  TTCCCTTTCCCCTTTCACACTCCGACTGTTCCACATGCCATACCTCTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTCCCCTTTCACACTCCGACTGTTCCACATGCCATACCTCTTCC  450

seq1  CCAGCTCACTGTCTCTATGTGGATATCCCCATTCCCTGCCTCACATGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCACTGTCTCTATGTGGATATCCCCATTCCCTGCCTCACATGACC  500

seq1  TTTAAACTCCCTGGGGCCTCCAGTCTCTTGAGGGTCAGGTGTGTCGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTCCCTGGGGCCTCCAGTCTCTTGAGGGTCAGGTGTGTCGTCTC  550

seq1  TGAATGAACACAGACCTAGCTGTCCTCTACTGTATGTGTGTTGGGGGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAACACAGACCTAGCTGTCCTCTACTGTATGTGTGTTGGGGGCCT  600

seq1  TATATCAGCTGGTGTATGCTGCCTGGTTGGTGGTCCAGTGTTTGAGAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGCTGGTGTATGCTGCCTGGTTGGTGGTCCAGTGTTTGAGAGAT  650

seq1  CTTAGGGGTCCAGA-TTAATTGAGACTGCTGGT-ACTCATACACAGTCA-  697
      |||||||||||||| |||||||||||||||||| ||||||||||||||| 
seq2  CTTAGGGGTCCAGATTTAATTGAGACTGCTGGTAACTCATACACAGTCAC  700

seq1  CCCTTCTCCTCATCTTC-TTTCAGTC-TTCCCTAATTCAACAAC--GGGG  743
      ||||||||||||||||| |||||||| |||||||||||||||||  ||||
seq2  CCCTTCTCCTCATCTTCTTTTCAGTCTTTCCCTAATTCAACAACGGGGGG  750

seq1  GGTCAGCAG-TTTCTGTCTATGGTTTGGATGCAAATATCTGCATCTGAGT  792
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCAGTTTTCTGTCTATGGTTTGGATGCAAATATCTGCATCTGAGT  800

seq1  ATTTCAACTGCTTGTTGGTCTTCT-GGGGTGTGGTCAT  829
      |||||||||||||||||||||||| |||||||||||||
seq2  ATTTCAACTGCTTGTTGGTCTTCTGGGGGTGTGGTCAT  838