BAC Information

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BAC

Clone NameB6Ng01-198N08
Chromosome14 (Build37)
Map Location 20,063,834 - 20,064,678
singlet/doubletsinglet
Overlap genenone
Upstream geneNr1d2, LOC632287, Rpl15, Nkiras1, Ube2e1, LOC627717, LOC238963, Ube2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344
Downstream geneLOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534, Gng2, 1810063B07Rik, Kcnk5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-198N08.bB6Ng01-198N08.g
ACCGA020329GA020330
length675850
definitionB6Ng01-198N08.b B6Ng01-198N08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccaactgaggaatttagctgagaagcacctaaagaaatgttcag
atcccttccagtcagtgccagcaccaggtcaccttgggcctggatgcggc
agacacccccaaggtccccttaggaccacgggtgagtggaagacaacttc
tgttccaatctaattgtgtggggtgtgagacagcattagggaagcaggaa
agccggcctgaccagggtcacaaatcccttccagtaggcaccagcaccag
gtcaccttgggtgtggagatggcagacactcccaacgtccctagaggaca
gcttctgaggcagatcatcagggaaccttccctgccagaggagaggtgtc
tgccccgcgcagaagagctttgccggagcacctgggggtgccatatttgt
cccctgatcagtctgagactagtctgcgcaggtgagagtggggattacag
aagctaacagcttctgggacaggctgaagcgacacaggttctgggaaagg
ccctgtttcaggccttcatcttctgccaggcggcaggtccgaacgccaga
tatctgtgcaccttccctgtaagaggagagcttgcctgcagagagtgctc
tgaccactgaaactcagaggagagagttagtctcccagggtctgctgata
taggctaacacaatcatgagaggaa
gaattccattcacacagtcctgcgggaggctggacccatcctcagcgagc
atgcacagctcccactgtttgcaacagatatgtgcatttctcagggatga
caacaactacagagaaagccagctggggaggggggctcattccgggggcc
tttgaggcagattatttcttttccttttgtctgtatctcttagaaaaagt
aagatgaggcagcgctggaaaaaagttcaaattgatccacggtctcactc
agggttgcgcatcaaattcaaaacacactttggggcatgcaggacaagat
ccagctttcccaaaggctaatgacaatggaggaaaaggtctgtgaagatt
ctgtcatcatttcaacaagatttgaattgatgtggagacaaactgctttt
gttttaaatggttaaaaacattttccctggagacacaggttgaataataa
gggttctcagtggtgcccgtaaatgaacaagttctgctctggctgtcagt
gagcttaacgggcacaggttgtcactcgcatgttcttggcctttattctg
tgaatctacaccatcccacaaccaacagaaggtcctcctaatgtctcttc
tttcaacagcctttaactgggggcaaggcttttatcatttcctgagtgcg
ctgagataccaagtcagcttgagctcatttagctctcgtggagtacggag
tcaatgaagtcaaagccattgactcagcctttatcccaatctctctaccc
ccatcctcctatgtgttaaactaaatgcatccccattggaacatatccca
actggcactgtaaatccgtagttattagaacaaagggtagttaggatgct

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20063834_20064678
seq2: B6Ng01-198N08.g_66_914

seq1  GAATTCCATTCACACAGTCCTGCGGGAGGCTGGACCCATCCTCAGCGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCACACAGTCCTGCGGGAGGCTGGACCCATCCTCAGCGAGC  50

seq1  ATGCACAGCTCCCACTGTTTGCAACAGATATGTGCATTTCTCAGGGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAGCTCCCACTGTTTGCAACAGATATGTGCATTTCTCAGGGATGA  100

seq1  CAACAACTACAGAGAAAGCCAGCTGGGGAGGGGGGCTCATTCCGGGGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTACAGAGAAAGCCAGCTGGGGAGGGGGGCTCATTCCGGGGGCC  150

seq1  TTTGAGGCAGATTATTTCTTTTCCTTTTGTCTGTATCTCTTAGAAAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCAGATTATTTCTTTTCCTTTTGTCTGTATCTCTTAGAAAAAGT  200

seq1  AAGATGAGGCAGCGCTGGAAAAAAGTTCAAATTGATCCACGGTCTCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAGGCAGCGCTGGAAAAAAGTTCAAATTGATCCACGGTCTCACTC  250

seq1  AGGGTTGCGCATCAAATTCAAAACACACTTTGGGGCATGCAGGACAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGCGCATCAAATTCAAAACACACTTTGGGGCATGCAGGACAAGAT  300

seq1  CCAGCTTTCCCAAAGGCTAATGACAATGGAGGAAAAGGTCTGTGAAGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTTCCCAAAGGCTAATGACAATGGAGGAAAAGGTCTGTGAAGATT  350

seq1  CTGTCATCATTTCAACAAGATTTGAATTGATGTGGAGACAAACTGCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATCATTTCAACAAGATTTGAATTGATGTGGAGACAAACTGCTTTT  400

seq1  GTTTTAAATGGTTAAAAACATTTTCCCTGGAGACACAGGTTGAATAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAATGGTTAAAAACATTTTCCCTGGAGACACAGGTTGAATAATAA  450

seq1  GGGTTCTCAGTGGTGCCCGTAAATGAACAAGTTCTGCTCTGGCTGTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTCAGTGGTGCCCGTAAATGAACAAGTTCTGCTCTGGCTGTCAGT  500

seq1  GAGCTTAACGGGCACAGGTTGTCACTCGCATGTTCTTGGCCTTTATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTAACGGGCACAGGTTGTCACTCGCATGTTCTTGGCCTTTATTCTG  550

seq1  TGAATCTACACCATCCCACAACCAACAGAAGGTCCTCCTAATGTCTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTACACCATCCCACAACCAACAGAAGGTCCTCCTAATGTCTCTTC  600

seq1  TTTCAACAGCCTTTAACTGGGGGCAAGGCTTTTATCA-TTCCTGAGTGCG  649
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTTCAACAGCCTTTAACTGGGGGCAAGGCTTTTATCATTTCCTGAGTGCG  650

seq1  CTGAGATACCAAGTCAGC-TGAGCTCATTTAGCTC-CGTGGAGTACGGAG  697
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  CTGAGATACCAAGTCAGCTTGAGCTCATTTAGCTCTCGTGGAGTACGGAG  700

seq1  TCAATGAAGTCAAAGCCATTGACTCAGCCTTTAT-CCAATCTCTCTACCC  746
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAATGAAGTCAAAGCCATTGACTCAGCCTTTATCCCAATCTCTCTACCC  750

seq1  CCATCCTCCTATGTGTT-AACTAAATGCATCCCCATT-GAACATATCCCA  794
      ||||||||||||||||| ||||||||||||||||||| ||||||||||||
seq2  CCATCCTCCTATGTGTTAAACTAAATGCATCCCCATTGGAACATATCCCA  800

seq1  ACTGGCACTGTAAATCCGTTAGTTATTAGAACAAAGGGGTAGGTAGGATG  844
      |||||||||||||||||| |||||||||||||||| |||||| |||||||
seq2  ACTGGCACTGTAAATCCG-TAGTTATTAGAACAAA-GGGTAGTTAGGATG  848

seq1  C  845
      |
seq2  C  849