BAC Information

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BAC

Clone NameB6Ng01-199E02
Chromosome14 (Build37)9 (Build37)
Map Location 95,480,761 - 95,481,66643,445,726 - 43,445,777
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043356, LOC100043783
Downstream geneLOC677613, LOC100043784, LOC382931, 4921530L21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199E02.bB6Ng01-199E02.g
ACCGA020636GA020637
length1,018552
definitionB6Ng01-199E02.b B6Ng01-199E02.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(95,480,761 - 95,481,666)(43,445,726 - 43,445,777)
sequence
gaattcttttgggtaaaagtttatttttcaattacaatccctggtttgca
ttacttttttctttaacactaacttcagaggagcagaaccctcatttctc
tttttctaagtcactttttcttgttttattaactatatctttgcagtcat
ttttatgaaattatttcaagtttaacctcaatatattttttttactcatc
tcccagaaatgtgaaattgcctgcctcaactcctctcttcttcttctatt
tcctttcctcttcctatcttttgctttcttccccttccctatctttgcct
tcctttctttcccttccttctctgcccttccgttatattttgttttgttt
tgttttgctttttctttacgacctaaattgtttttatcttttatttttat
tctttaatcttttttttttatagtccagactttattcctttcctggttta
cctctaactattccacatcacacatctacttccctgtgtccaacaggatg
tccctatcccccctaacctcatccctccagacctccccactccctggggc
cccaagtctctcaaaggatagttgcatcttctctgactgaagccagacct
ggcattcctctgctgtatgtgtcgggggcctcatatcagctggtatatcc
ttcctggttggtagcttagtgtctgagagatctcgggggtacaggttaat
tgagactgctggccttcctatagggttaccctcctccttagcttcttcca
atttcccccaattcaaccacaggggtcaccagcttctgtccattagtttg
gtgcaaatatctgcatctgactctttcaactgcttgatgcagtaatgata
gctccctttttttgagcacaccatagcctcagtaatagtgtcagttcttg
ggaccttcccttgagctggatcccactttgggcctgtcgctggacctctt
ttccttaggctcctctccatttccatccctgcagtctttcagacaggaaa
attgtggctcagagtttt

cttattttatttaaataatattaggaagaaagttttaagagattgtttta
gttttttttttcacttttgttttttgtttgtttgtcttttgttttgtttt
gcttttgacagaaagatataataaatatatagataaaataaataggtaga
atgaagaatagactgtgcccactcctcataattaagtgaaggctgaataa
tgagaataaaggaaaaataggattgagataaatttttgttcaagaaaaaa
atattcaaagtcagacccaagaatgaagtcacatgtgtatgctatgataa
catgaggccatatgaaattgttttggatttaaaatgagtttatgctttca
aacactgtttgttctcagcatccttctgtaactccccttaagcttggaat
tttatccatgaggtgattttctaaacaatgtttggctaataccgcataga
aagctagagaaaagaaagtggtgactcaggggttctgcctcatccattta
agagagagagacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_95480761_95481666
seq2: B6Ng01-199E02.b_43_948

seq1  GAATTCTTTTGGGTAAAAGTTTATTTTTCAATTACAATCCCTGGTTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGGTAAAAGTTTATTTTTCAATTACAATCCCTGGTTTGCA  50

seq1  TTACTTTTTTCTTTAACACTAACTTCAGAGGAGCAGAACCCTCATTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTTTCTTTAACACTAACTTCAGAGGAGCAGAACCCTCATTTCTC  100

seq1  TTTTTCTAAGTCACTTTTTCTTGTTTTATTAACTATATCTTTGCAGTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTAAGTCACTTTTTCTTGTTTTATTAACTATATCTTTGCAGTCAT  150

seq1  TTTTATGAAATTATTTCAAGTTTAACCTCAATATATTTTTTTTACTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGAAATTATTTCAAGTTTAACCTCAATATATTTTTTTTACTCATC  200

seq1  TCCCAGAAATGTGAAATTGCCTGCCTCAACTCCTCTCTTCTTCTTCTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAATGTGAAATTGCCTGCCTCAACTCCTCTCTTCTTCTTCTATT  250

seq1  TCCTTTCCTCTTCCTATCTTTTGCTTTCTTCCCCTTCCCTATCTTTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCCTCTTCCTATCTTTTGCTTTCTTCCCCTTCCCTATCTTTGCCT  300

seq1  TCCTTTCTTTCCCTTCCTTCTCTGCCCTTCCGTTATATTTTGTTTTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCTTTCCCTTCCTTCTCTGCCCTTCCGTTATATTTTGTTTTGTTT  350

seq1  TGTTTTGCTTTTTCTTTACGACCTAAATTGTTTTTATCTTTTATTTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCTTTTTCTTTACGACCTAAATTGTTTTTATCTTTTATTTTTAT  400

seq1  TCTTTAATCTTTTTTTTTTATAGTCCAGACTTTATTCCTTTCCTGGTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATCTTTTTTTTTTATAGTCCAGACTTTATTCCTTTCCTGGTTTA  450

seq1  CCTCTAACTATTCCACATCACACATCTACTTCCCTGTGTCCAACAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAACTATTCCACATCACACATCTACTTCCCTGTGTCCAACAGGATG  500

seq1  TCCCTATCCCCCCTAACCTCATCCCTCCAGACCTCCCCACTCCCTGGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATCCCCCCTAACCTCATCCCTCCAGACCTCCCCACTCCCTGGGGC  550

seq1  CCCAAGTCTCTCAAAGGATAGTTGCATCTTCTCTGACTGAAGCCAGACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTCTCTCAAAGGATAGTTGCATCTTCTCTGACTGAAGCCAGACCT  600

seq1  GGCATTCCTCTGCTGTATGTGTCGGGGGCCTCATATCAGCTGGTATATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCCTCTGCTGTATGTGTCGGGGGCCTCATATCAGCTGGTATATCC  650

seq1  TTCCTGGTTGGTAGCTTAGTGTCTGAGAGATCTCGGGGGTACAGGTTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGTTGGTAGCTTAGTGTCTGAGAGATCTCGGGGGTACAGGTTAAT  700

seq1  TGAGACTGCTGGCCTTCCTATAGGGTTACCCTCCTCCTTAGCTTCTTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGCTGGCCTTCCTATAGGGTTACCCTCCTCCTTAGCTTCTTCCA  750

seq1  ATTTCCCCCAATTCAACCACAGGGGTCACCAGCTTCTGTCCATTAGTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCCCCAATTCAACCACAGGGGTCACCAGCTTCTGTCCATTAGTTTG  800

seq1  GTGCAAATATCTGCATCTGACTCTTTCAACTGCTTGATGCAGTAATGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAATATCTGCATCTGACTCTTTCAACTGCTTGATGCAGTAATGATA  850

seq1  GCTCCCTTTTTTTGAGCACACCATAGCCTCAGTAATAGTGTCAGTTCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTTTTTTTGAGCACACCATAGCCTCAGTAATAGTGTCAGTTCTTG  900

seq1  GGACCT  906
      ||||||
seq2  GGACCT  906


seq1: chr9_43445726_43445777
seq2: B6Ng01-199E02.g_569_620 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACTGTCTCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACTGTCTCTCTCT  50

seq1  CT  52
      ||
seq2  CT  52


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