BAC Information

Click to search

BAC

Clone NameB6Ng01-199F03
Chromosome14 (Build37)
Map Location 68,899,773 - 68,900,411
singlet/doubletsinglet
Overlap genenone
Upstream geneEbf2, EG628416, LOC100043046, LOC100043056, Cdca2, Kctd9, Gnrh1, Dock5, Nefl, Nefm, LOC100043072
Downstream geneAdam7, Adamdec1, Adam28, LOC641033, LOC100043082, Stc1, EG545808, Nkx2-6, Nkx3-1, Slc25a37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199F03.bB6Ng01-199F03.g
ACCGA020682GA020683
length6391,025
definitionB6Ng01-199F03.b B6Ng01-199F03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaactgctctagtcattcagaatcatttaacctttagttaatat
aactagaaaacaaatagtatttgttggatatcaacactcataattattaa
ctaattttaagatataaaatgataatcactttatagcttgcaaacagaaa
ctgagaacaatgttaaacccaagacttggcttcaaacccaggttttctta
acattgaagtctatgtaaatgcttaccttcccccattcctatacagctcc
ttcatggccacagctgttaaacaaatagggcacaaagccagtgttttgga
gctgagttcttttgaaagacccacaatgtgaggactccccaatgttctga
ctcaggagaggtgacaccccaaatcactcacgataaaaagccttgatgca
aactacaagaggactttttattccaagagtgctctggggcccacagtcat
acgccacgcaggggttgaggactgtggtgctccgagtactgggtaagggg
gtatttaaaggaagaaaccacaactcaagggggtggggagggaattgttg
gaaaataacaaaaataccagttaagagtcatgaggaagtagaaagtcaag
acagttttttatgagcctctaacaatagcacatttgcat
gaattcacagcttgagtaaactgaaggatagggtgttgtgtccagccagc
agatcacagcctgggttctggcctggaaaggcattttggaaacctggaag
agaagaggggctaggcagtgagagaaagaaatgcagctaagacaggcatt
ctgatcaaagctcaattttactgttccgacactcagttatgaaggaaggg
ggagggggcctgattcccgccaaataatctcaggatccagtagcagggtg
agcacgagtatggctccaaacagcaaagtggcacgttccagcagtgggcg
tggcagaacgattgagtgggaagctctacccctgagcaagcaggtttcag
gctgggggaggggagactacatctcctctctgttgttaataaaaataaaa
attaaaaaaaggctatgctcaatagttctgcctgaattcttggggctaaa
gaaaaaacctgtctccgtgggattccctaacttttcttatggtaaatcgt
atctggataagactttcctttctatcctagtaaacaactaacagaaaagc
cctaagcagtaggctctgactttataatgctaattagtgctgaataggta
acttcctagttgaattttaagtagggcgttggaaccctggctaagtttga
ctgaacaaatttgaaatacactttattaagaataacactgagttgatatt
gctccgcattttgggatgacaggcgggaaacagggaggaggggtatgacg
ggctccatagtacaaggccaattgactttttaggggtgagaggctgtgaa
gggcttgcccttccaacagtacggtctccaacctctcttcccccctatta
attaagtttaaaaaggcattgcttaactgagtgatcaaatgatttctcat
ctgtagatgagtggggcttttaaccttggcttgggtggacattgaccaga
tccctccgtgggatgctgtcatgacccccatctggtggctcttggctatc
tttggggaagagagccagatgctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_68899773_68900411
seq2: B6Ng01-199F03.b_47_685

seq1  GAATTCAAACTGCTCTAGTCATTCAGAATCATTTAACCTTTAGTTAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTGCTCTAGTCATTCAGAATCATTTAACCTTTAGTTAATAT  50

seq1  AACTAGAAAACAAATAGTATTTGTTGGATATCAACACTCATAATTATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAAAACAAATAGTATTTGTTGGATATCAACACTCATAATTATTAA  100

seq1  CTAATTTTAAGATATAAAATGATAATCACTTTATAGCTTGCAAACAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTAAGATATAAAATGATAATCACTTTATAGCTTGCAAACAGAAA  150

seq1  CTGAGAACAATGTTAAACCCAAGACTTGGCTTCAAACCCAGGTTTTCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACAATGTTAAACCCAAGACTTGGCTTCAAACCCAGGTTTTCTTA  200

seq1  ACATTGAAGTCTATGTAAATGCTTACCTTCCCCCATTCCTATACAGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAGTCTATGTAAATGCTTACCTTCCCCCATTCCTATACAGCTCC  250

seq1  TTCATGGCCACAGCTGTTAAACAAATAGGGCACAAAGCCAGTGTTTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGCCACAGCTGTTAAACAAATAGGGCACAAAGCCAGTGTTTTGGA  300

seq1  GCTGAGTTCTTTTGAAAGACCCACAATGTGAGGACTCCCCAATGTTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTCTTTTGAAAGACCCACAATGTGAGGACTCCCCAATGTTCTGA  350

seq1  CTCAGGAGAGGTGACACCCCAAATCACTCACGATAAAAAGCCTTGATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGAGGTGACACCCCAAATCACTCACGATAAAAAGCCTTGATGCA  400

seq1  AACTACAAGAGGACTTTTTATTCCAAGAGTGCTCTGGGGCCCACAGTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAAGAGGACTTTTTATTCCAAGAGTGCTCTGGGGCCCACAGTCAT  450

seq1  ACGCCACGCAGGGGTTGAGGACTGTGGTGCTCCGAGTACTGGGTAAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCACGCAGGGGTTGAGGACTGTGGTGCTCCGAGTACTGGGTAAGGGG  500

seq1  GTATTTAAAGGAAGAAACCACAACTCAAGGGGGTGGGGAGGGAATTGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAAGGAAGAAACCACAACTCAAGGGGGTGGGGAGGGAATTGTTG  550

seq1  GAAAATAACAAAAATACCAGTTAAGAGTCATGAGGAAGTAGAAAGTCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAACAAAAATACCAGTTAAGAGTCATGAGGAAGTAGAAAGTCAAG  600

seq1  ACAGTTTTCTATGAGCCTCTAACAATAGCACATTTGCAT  639
      |||||||| ||||||||||||||||||||||||||||||
seq2  ACAGTTTTTTATGAGCCTCTAACAATAGCACATTTGCAT  639