BAC Information

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BAC

Clone NameB6Ng01-200F10
Chromosome14 (Build37)
Map Location 81,419,990 - 81,543,435
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfm4, LOC672828
Downstream geneLOC639207
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-200F10.bB6Ng01-200F10.g
ACCGA021428GA021429
length1,172242
definitionB6Ng01-200F10.b B6Ng01-200F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,419,990 - 81,421,154)(81,543,194 - 81,543,435)
sequence
gaattcaccattttatgtaaggcttttaattgtattctgggctttgctta
ccctgtttgagatctctttgaatgatttcagaggcaaagtttgtaagtgg
acattttcacacctttcaaattcttgcaaaagatttccaaagtgccaaca
tttgctaaaatgagctacctatatagttagatatatcttaatttatatta
cataggtgttttatctataaaatataaaagtttaaaaattctgctcaagt
gagcaactcctatgttcatagtgtcctagaagttatccaacataatatat
tgtattttaggaaacatagatactaatatcaaaaagacaaatagaacagg
ttagctatatacaaatattcattgaaatcatgttaatggtattccaaaag
atttttcggtcatgtaaatatcacgacctctagttttccactataaaatg
caaatcactttatttgttgcattattgtatttatataaacatgtaatatg
ataaccaagacacctgtaatatcaaccaataataaggaagagatcaaaca
agtccatactttaaaggtgccttttgtagaactgaaaagtctgtaggctc
cttgggtctctaagtgaccccaccttaaattctctagacactttcctttt
ctttgtttttgtttcattgtttgttttggtgaatttcacctttgtacagc
ctctttttgatgtctttaagcagcagctatagcatctcacttccttaagc
actcagggataagtacgcattggtatctgctacatcatgcaggttccact
ctccctaaacccattcttgcagtggccatagatgccatgtgtttactgat
ttatgtaaaagtaccaatcactgcagctaagctgtggtgattactaactc
tggcttagagcagtcagccccaacaagtgatccagagaaagtgtagctgt
cttagttctggtgaataactaataactttcttattgggtaaaggatccca
aactctgaatattgtcatagttttctggacaataaaaggtttctgagctg
gatcataagcaaattccaaagactctacatttaattcaactcatttttac
tttgactttctataacctttcctaagttatagaaaataacctagcatgcc
atatataattgccagggttttc

gaattctgggtggagggactgggaattgggacaacctatggaatgtaaat
aaataaattaattttaaaaatgggcaataggcaatttaagaagtcaagaa
tcaaaagacattctcaagaagtctttttaaatgtaacggaaacagaagaa
agagcgaaattacaaaatggttcaaagtgtctaaacacaaggttagagaa
agtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_81419990_81421154
seq2: B6Ng01-200F10.b_45_1216

seq1  GAATTCACCATTTTATGTAAGGCTTTTAATTGTATTCTGGGCTTTGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATTTTATGTAAGGCTTTTAATTGTATTCTGGGCTTTGCTTA  50

seq1  CCCTGTTTGAGATCTCTTTGAATGATTTCAGAGGCAAAGTTTGTAAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTTGAGATCTCTTTGAATGATTTCAGAGGCAAAGTTTGTAAGTGG  100

seq1  ACATTTTCACACCTTTCAAATTCTTGCAAAAGATTTCCAAAGTGCCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCACACCTTTCAAATTCTTGCAAAAGATTTCCAAAGTGCCAACA  150

seq1  TTTGCTAAAATGAGCTACCTATATAGTTAGATATATCTTAATTTATATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAAAATGAGCTACCTATATAGTTAGATATATCTTAATTTATATTA  200

seq1  CATAGGTGTTTTATCTATAAAATATAAAAGTTTAAAAATTCTGCTCAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGTGTTTTATCTATAAAATATAAAAGTTTAAAAATTCTGCTCAAGT  250

seq1  GAGCAACTCCTATGTTCATAGTGTCCTAGAAGTTATCCAACATAATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTCCTATGTTCATAGTGTCCTAGAAGTTATCCAACATAATATAT  300

seq1  TGTATTTTAGGAAACATAGATACTAATATCAAAAAGACAAATAGAACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTAGGAAACATAGATACTAATATCAAAAAGACAAATAGAACAGG  350

seq1  TTAGCTATATACAAATATTCATTGAAATCATGTTAATGGTATTCCAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTATATACAAATATTCATTGAAATCATGTTAATGGTATTCCAAAAG  400

seq1  ATTTTTCGGTCATGTAAATATCACGACCTCTAGTTTTCCACTATAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCGGTCATGTAAATATCACGACCTCTAGTTTTCCACTATAAAATG  450

seq1  CAAATCACTTTATTTGTTGCATTATTGTATTTATATAAACATGTAATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACTTTATTTGTTGCATTATTGTATTTATATAAACATGTAATATG  500

seq1  ATAACCAAGACACCTGTAATATCAACCAATAATAAGGAAGAGATCAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAGACACCTGTAATATCAACCAATAATAAGGAAGAGATCAAACA  550

seq1  AGTCCATACTTTAAAGGTGCCTTTTGTAGAACTGAAAAGTCTGTAGGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATACTTTAAAGGTGCCTTTTGTAGAACTGAAAAGTCTGTAGGCTC  600

seq1  CTTGGGTCTCTAAGTGACCCCACCTTAAATTCTCTAGACACTTTCCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTCTCTAAGTGACCCCACCTTAAATTCTCTAGACACTTTCCTTTT  650

seq1  CTTTGTTTTTGTTTCATTGTTTGTTTTGGTGAATTTCACCTTTGTACAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTTGTTTCATTGTTTGTTTTGGTGAATTTCACCTTTGTACAGC  700

seq1  CTCTTTTTGATGTCTTTAAGCAGCAGCTATAGCATCTCACTTCCTTAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTGATGTCTTTAAGCAGCAGCTATAGCATCTCACTTCCTTAAGC  750

seq1  ACTCAGGGATAAGTACGCATTGGTATCTGCTACATCATGCAGGTTCCACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGATAAGTACGCATTGGTATCTGCTACATCATGCAGGTTCCACT  800

seq1  CTCCCTAAACCCATTCTTGCAGTGGCCATAGATGCCATGTGTTTACTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAAACCCATTCTTGCAGTGGCCATAGATGCCATGTGTTTACTGAT  850

seq1  TTATGTAAAAGTACCAATCACTGCAGCTAAGCTGTGGTGATTACTAACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAAAAGTACCAATCACTGCAGCTAAGCTGTGGTGATTACTAACTC  900

seq1  TGGCTTAGAGCAGTCAGCCCCAACAAGTGATCCAGAGAAAGTGTAGCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAGAGCAGTCAGCCCCAACAAGTGATCCAGAGAAAGTGTAGCTGT  950

seq1  CTTAGTTCTGGTGAATAACTAATAAC-TTCTTATT-GGTAAA-GATCCCA  997
      |||||||||||||||||||||||||| |||||||| |||||| |||||||
seq2  CTTAGTTCTGGTGAATAACTAATAACTTTCTTATTGGGTAAAGGATCCCA  1000

seq1  AACTCTGAATATTGTCATAGTTTTCTGGAC-ATAAA--GTTTCTGAGCTG  1044
      |||||||||||||||||||||||||||||| |||||  ||||||||||||
seq2  AACTCTGAATATTGTCATAGTTTTCTGGACAATAAAAGGTTTCTGAGCTG  1050

seq1  GATCATAAGGCAAATTCCAAAGACTCTACCATTAA-TCAACTCATTTTTA  1093
      |||||||| ||||||||||||||||||||  |||| ||||||||||||||
seq2  GATCATAA-GCAAATTCCAAAGACTCTACATTTAATTCAACTCATTTTTA  1099

seq1  CTTTAATTTTCTATAA-CTTTCTAAATTTATTAGAAAAATAACTAGAATG  1142
      |||| | ||||||||| |||||  || ||| |||||||  | |||| |||
seq2  CTTTGACTTTCTATAACCTTTCCTAAGTTA-TAGAAAATAACCTAGCATG  1148

seq1  CATTATATATAATGC--AGGTTTTC  1165
      |  |||||| | |||   |||||||
seq2  CCATATATA-ATTGCCAGGGTTTTC  1172


seq1: chr14_81543194_81543435
seq2: B6Ng01-200F10.g_62_303 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACACTTTCTCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACTTTCTCTAA  50

seq1  CCTTGTGTTTAGACACTTTGAACCATTTTGTAATTTCGCTCTTTCTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGTTTAGACACTTTGAACCATTTTGTAATTTCGCTCTTTCTTCTG  100

seq1  TTTCCGTTACATTTAAAAAGACTTCTTGAGAATGTCTTTTGATTCTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCGTTACATTTAAAAAGACTTCTTGAGAATGTCTTTTGATTCTTGAC  150

seq1  TTCTTAAATTGCCTATTGCCCATTTTTAAAATTAATTTATTTATTTACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAATTGCCTATTGCCCATTTTTAAAATTAATTTATTTATTTACAT  200

seq1  TCCATAGGTTGTCCCAATTCCCAGTCCCTCCACCCAGAATTC  242
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATAGGTTGTCCCAATTCCCAGTCCCTCCACCCAGAATTC  242


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