BAC Information

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BAC

Clone NameB6Ng01-202C08
Chromosome14 (Build37)
Map Location 105,831,328 - 106,013,278
singlet/doubletdoublet
Overlap genenone
Upstream genePou4f1, 2610206B13Rik, D130009I18Rik, LOC435420, Rbm26, LOC621103, LOC100043466, Ndfip2
Downstream geneLOC620376, LOC100043469, Spry2, EG621364, LOC212084, Trim52, LOC100043807, LOC100043476, LOC100043809, LOC668736, EG668738, EG668739, LOC621487, EG668743, LOC100043811, LOC621499, LOC100043814, EG668742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202C08.bB6Ng01-202C08.g
ACCGA022722GA022723
length1,1241,134
definitionB6Ng01-202C08.b B6Ng01-202C08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,012,152 - 106,013,278)(105,831,328 - 105,832,467)
sequence
gaattcattaacagacttcacatctcacctctgtaagttctgtttgagtc
cttataaatataaagacctcctctgtctacaaagagtgtgtgttttcctg
taattaatggaacttatgtactgtgcttgctacagatgtctcagcactgt
ctaaccccttcatttctgctttctaaatgtttagttatccattgtacgtt
cctacttctaggcctgcctaggatactattgaatgtttcagtttattatc
ttcttgcaaagagggttgaactttattttatttgacaattaaattacaca
tgaactaattagtgtggtgtgctatttcaattagaacagattttaaaaag
aaaaaaatacaaaaacaaaacaacaacaacaaaaccccaactcattgtca
gagacaggttcacaagaggaaagtataacagatttatttggtcaaatttt
tgcatattatgaggatttccagaaatgaaagttcaaagacctttggaaaa
ccgttctgttgcttaggcttgatgaagcatgaaaagtcaggcagaaatgt
gacaattcgagacaaaatgcaccatgtgagagtaatagcttgcagaagga
caatcactgaggcctgccttcagtgtggcactttgtggttactttgtcat
gctgtgatcaaagactgtgacaaaggcaactcactggagaaggggcttct
ctggatttgcagtcccattaggaaacagtgtgtcctagtgaagaagggca
tagtgaaaggggcaggaagctcactggtcacttcccatcctcactcagaa
agaggaaagcaagcagcaagtggagaccactcaagtgttcgtccccagtg
ggcccacttcctccattaacgcttcacctcctaaaaattctacaaccttc
ccaaagggcaccgtcagctggggacaaacatgcaaacataagagaggatg
gaggacacttttccattccagccacaagcatcccttccttctaggtgcag
ggcagactttgcgtggacaggctcatgacttactatcaaggtcagatggt
tttctttcaccactcctaccagaggtggtgggggggagctaaatagtatt
tctggttttgtggcttgcgttggg
gaattcaataggattagatagatagctgacagggatcgaagagtttccaa
gggtaacccgcagtaatgttgtgttgtagttagtaccacctcactggctt
acttcactttaaatctaagtaacaaacaagctttgattgagcaactgttt
gaggtttcaacttatgatgggcagaaacatagttttctataaaactgagc
attgattatgcgaattaattataacatcctcatcctgggagatctgtgtg
gccctcttacggatgcaccaggcttgtgcatgagacccgtttgctgtgtt
ggaggagcaggtgatgtatgatttccaaaggcagttattgaaatgaacac
ttactttgagtgtctcataaaacagtgtttgagcccaggtggaaagtact
gtcaagtctttcctcagccgctccttcttccttgggtctgtttgatactc
tcccctttgatgacattgcccctcagagaatctagctttcattaccttct
ttctccttgcagagtctccttcttacctccgctcccttcaattctctctt
ccttgtcatttctgagttctgccactgaagggaaaagcaccaacctgtca
ccaggccatgagggtatctgcagcttttgcacaacaggcaggcaccggca
gcaaggcctttcgttcttggatacacactcctctccctgccactatagac
gtagatcaccccccaccccctgcagctgcagccctgcaacagctcattca
ctacacaggggccggctgtggggctagggtagctccaggcactggagata
atctcaggcagctacagtgactggtgaagatcaaaggttttgtgcctgcc
tgaggtcaggataacacttgctttgcaagcctgggagccctaaccttatg
tcagcagatgggagaacatggctttctctttcaaaagttttagcaaaaga
tagtaaataaaattcaaatcattctgaggctgtttctgtatcaaatgact
ttgatttctgatcatttttttgtgttgtctcaaaggtaatgagctcaatc
cgtagaaagccactttttctgtagaaggtagatctcttgggagacgaaaa
taacctaactcctacaggttcatgccatagcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_106012152_106013278
seq2: B6Ng01-202C08.b_51_1174 (reverse)

seq1  CCCAACGCAAGCCACAAAACCCAGAAATACTATTTTAAGCTTCCCCCCAC  50
      ||||||||||||||||||| |||||||||||||||  |||| ||||||||
seq2  CCCAACGCAAGCCACAAAA-CCAGAAATACTATTT--AGCTCCCCCCCAC  47

seq1  CA-CTCTGGTAGAAGGTGGTTGGAAAG-AAACCATCTGACC-TGATAGTA  97
      || ||||||||| | |||||  ||||| ||||||||||||| ||||||||
seq2  CACCTCTGGTAGGA-GTGGT--GAAAGAAAACCATCTGACCTTGATAGTA  94

seq1  AGTCATGAGCCCTGTTCCACGCAAAGTCTGCCCTGCACCTAGAAGGAAGG  147
      ||||||||| |||| |||||||||||||||||||||||||||||||||||
seq2  AGTCATGAG-CCTG-TCCACGCAAAGTCTGCCCTGCACCTAGAAGGAAGG  142

seq1  GATGCTTGTGGCTGGAATGGAAAAGTGTCCTCCATCCTCTCTTATGTTTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTGTGGCTGGAATGGAAAAGTGTCCTCCATCCTCTCTTATGTTTG  192

seq1  CATGTTTGTCCCCAGCTGACGGTGCCCTTTGGGAAGGTTGTAGAATTTTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGTCCCCAGCTGACGGTGCCCTTTGGGAAGGTTGTAGAATTTTT  242

seq1  AGGAGGTGAAGCGTTAATGGAGGAAGTGGG-CCACTGGGGACGAACACTT  296
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGAGGTGAAGCGTTAATGGAGGAAGTGGGCCCACTGGGGACGAACACTT  292

seq1  GAGTGGTCTCCACTTGCTGCTTGCTTTCCTCTTTCTGAGTGAGGATGGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGTCTCCACTTGCTGCTTGCTTTCCTCTTTCTGAGTGAGGATGGGA  342

seq1  AGTGACCAGTGAGCTTCCTGCCCCTTTCACTATG-CCTTCTTCACTAGGA  395
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGTGACCAGTGAGCTTCCTGCCCCTTTCACTATGCCCTTCTTCACTAGGA  392

seq1  CACACTGTTTCCTAATGGGACTGCAAATCCAGAGAAGCCCCTTCTCCAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTTTCCTAATGGGACTGCAAATCCAGAGAAGCCCCTTCTCCAGT  442

seq1  GAGTTGCCTTTGTCACAGTCTTTGATCACAGCATGACAAAGTAACCACAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCCTTTGTCACAGTCTTTGATCACAGCATGACAAAGTAACCACAA  492

seq1  AGTGCCACACTGAAGGCAGGCCTCAGTGATTGTCCTTCTGCAAGCTATTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACACTGAAGGCAGGCCTCAGTGATTGTCCTTCTGCAAGCTATTA  542

seq1  CTCTCACATGGTGCATTTTGTCTCGAATTGTCACATTTCTGCCTGACTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACATGGTGCATTTTGTCTCGAATTGTCACATTTCTGCCTGACTTT  592

seq1  TCATGCTTCATCAAGCCTAAGCAACAGAACGGTTTTCCAAAGGTCTTTGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTTCATCAAGCCTAAGCAACAGAACGGTTTTCCAAAGGTCTTTGA  642

seq1  ACTTTCATTTCTGGAAATCCTCATAATATGCAAAAATTTGACCAAATAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCATTTCTGGAAATCCTCATAATATGCAAAAATTTGACCAAATAAA  692

seq1  TCTGTTATACTTTCCTCTTGTGAACCTGTCTCTGACAATGAGTTGGGGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTATACTTTCCTCTTGTGAACCTGTCTCTGACAATGAGTTGGGGTT  742

seq1  TTGTTGTTGTTGTTTTGTTTTTGTATTTTTTTCTTTTTAAAATCTGTTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGTTGTTTTGTTTTTGTATTTTTTTCTTTTTAAAATCTGTTCT  792

seq1  AATTGAAATAGCACACCACACTAATTAGTTCATGTGTAATTTAATTGTCA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAAATAGCACACCACACTAATTAGTTCATGTGTAATTTAATTGTCA  842

seq1  AATAAAATAAAGTTCAACCCTCTTTGCAAGAAGATAATAAACTGAAACAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATAAAGTTCAACCCTCTTTGCAAGAAGATAATAAACTGAAACAT  892

seq1  TCAATAGTATCCTAGGCAGGCCTAGAAGTAGGAACGTACAATGGATAACT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGTATCCTAGGCAGGCCTAGAAGTAGGAACGTACAATGGATAACT  942

seq1  AAACATTTAGAAAGCAGAAATGAAGGGGTTAGACAGTGCTGAGACATCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTAGAAAGCAGAAATGAAGGGGTTAGACAGTGCTGAGACATCTG  992

seq1  TAGCAAGCACAGTACATAAGTTCCATTAATTACAGGAAAACACACACTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAGCACAGTACATAAGTTCCATTAATTACAGGAAAACACACACTCT  1042

seq1  TTGTAGACAGAGGAGGTCTTTATATTTATAAGGACTCAAACAGAACTTAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGACAGAGGAGGTCTTTATATTTATAAGGACTCAAACAGAACTTAC  1092

seq1  AGAGGTGAGATGTGAAGTCTGTTAATGAATTC  1127
      ||||||||||||||||||||||||||||||||
seq2  AGAGGTGAGATGTGAAGTCTGTTAATGAATTC  1124

seq1: chr14_105831328_105832467
seq2: B6Ng01-202C08.g_66_1199

seq1  GAATTCAATAGGATTAGATAGATAGCTGACAGGGATCGAAGAGTTTCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAGGATTAGATAGATAGCTGACAGGGATCGAAGAGTTTCCAA  50

seq1  GGGTAACCCGCAGTAATGTTGTGTTGTAGTTAGTACCACCTCACTGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAACCCGCAGTAATGTTGTGTTGTAGTTAGTACCACCTCACTGGCTT  100

seq1  ACTTCACTTTAAATCTAAGTAACAAACAAGCTTTGATTGAGCAACTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACTTTAAATCTAAGTAACAAACAAGCTTTGATTGAGCAACTGTTT  150

seq1  GAGGTTTCAACTTATGATGGGCAGAAACATAGTTTTCTATAAAACTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCAACTTATGATGGGCAGAAACATAGTTTTCTATAAAACTGAGC  200

seq1  ATTGATTATGCGAATTAATTATAACATCCTCATCCTGGGAGATCTGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTATGCGAATTAATTATAACATCCTCATCCTGGGAGATCTGTGTG  250

seq1  GCCCTCTTACGGATGCACCAGGCTTGTGCATGAGACCCGTTTGCTGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTACGGATGCACCAGGCTTGTGCATGAGACCCGTTTGCTGTGTT  300

seq1  GGAGGAGCAGGTGATGTATGATTTCCAAAGGCAGTTATTGAAATGAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGCAGGTGATGTATGATTTCCAAAGGCAGTTATTGAAATGAACAC  350

seq1  TTACTTTGAGTGTCTCATAAAACAGTGTTTGAGCCCAGGTGGAAAGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGAGTGTCTCATAAAACAGTGTTTGAGCCCAGGTGGAAAGTACT  400

seq1  GTCAAGTCTTTCCTCAGCCGCTCCTTCTTCCTTGGGTCTGTTTGATACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGTCTTTCCTCAGCCGCTCCTTCTTCCTTGGGTCTGTTTGATACTC  450

seq1  TCCCCTTTGATGACATTGCCCCTCAGAGAATCTAGCTTTCATTACCTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTGATGACATTGCCCCTCAGAGAATCTAGCTTTCATTACCTTCT  500

seq1  TTCTCCTTGCAGAGTCTCCTTCTTACCTCCGCTCCCTTCAATTCTCTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTTGCAGAGTCTCCTTCTTACCTCCGCTCCCTTCAATTCTCTCTT  550

seq1  CCTTGTCATTTCTGAGTTCTGCCACTGAAGGGAAAAGCACCAACCTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCATTTCTGAGTTCTGCCACTGAAGGGAAAAGCACCAACCTGTCA  600

seq1  CCAGGCCATGAGGGTATCTGCAGCTTTTGCACAACAGGCAGGCACCGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCATGAGGGTATCTGCAGCTTTTGCACAACAGGCAGGCACCGGCA  650

seq1  GCAAGGCCTTTCGTTCTTGGATACACACTCCTCTCCCTGCCACTATAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCCTTTCGTTCTTGGATACACACTCCTCTCCCTGCCACTATAGAC  700

seq1  GTAGATCACCCCCCACCCCCTGCAGCTGCAGCCCTGCAACAGCTCATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCACCCCCCACCCCCTGCAGCTGCAGCCCTGCAACAGCTCATTCA  750

seq1  CTACACAGGGGCCGGCTGTGGGGCTAGGGTAGCTCCAGGCACTGGAGATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGGGGCCGGCTGTGGGGCTAGGGTAGCTCCAGGCACTGGAGATA  800

seq1  ATCTCAGGCAGCTACAGTGACTGGTGAAGATCAAAGGTTTTGTGCCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGGCAGCTACAGTGACTGGTGAAGATCAAAGGTTTTGTGCCTGCC  850

seq1  TGAGGTCAGGATAACACTTGCTTTGCAAGCCTGGGAGCCCTAACCTTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCAGGATAACACTTGCTTTGCAAGCCTGGGAGCCCTAACCTTATG  900

seq1  TCAGCAGATGGGAGAACATGGCTTTCTCTTTCAAAAAGTTTTAGCAAAAG  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCAGCAGATGGGAGAACATGGCTTTCTCTTTC-AAAAGTTTTAGCAAAAG  949

seq1  ATAGTAAATAAAATTCAAATCATTCTGAGGCTGTTTCTGTATCAAATGAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAATAAAATTCAAATCATTCTGAGGCTGTTTCTGTATCAAATGAC  999

seq1  TTTGATTTTCTGATCATTTTTTTGTTGTTGTTCTC-AAGGTAATGGAGGC  1049
      ||||| |||||||||||||||||| ||||| |||| |||||||||   ||
seq2  TTTGA-TTTCTGATCATTTTTTTG-TGTTG-TCTCAAAGGTAATG--AGC  1044

seq1  TCAAATCCGTAGAAAG-CAC-TTTTCTGTAGAAAGTAGATCTCT--GGAG  1095
      || ||||||||||||| ||| |||||||||||| ||||||||||  ||||
seq2  TC-AATCCGTAGAAAGCCACTTTTTCTGTAGAAGGTAGATCTCTTGGGAG  1093

seq1  ACAGAAAATAAACCAAACTCCTAACCAGTTTCATGCATAAGCCCC  1140
      || |||||| |||| ||||||||  ||| |||||||   ||||||
seq2  AC-GAAAAT-AACCTAACTCCTA--CAGGTTCATGCCATAGCCCC  1134