BAC Information

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BAC

Clone NameB6Ng01-202I13
Chromosome14 (Build37)
Map Location 113,790,300 - 113,791,420
singlet/doubletsinglet
Overlap genenone
Upstream geneEG223186, LOC100043509, Tpm3-rs7
Downstream geneLOC100043510, LOC382947, LOC668791
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202I13.bB6Ng01-202I13.g
ACCGA023003GA023004
length1,1221,184
definitionB6Ng01-202I13.b B6Ng01-202I13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataagtttgtcttaaggggtagaattagacacatatgctgttgt
aatcttatacaaggtgtaacggcttcattaccattagtagcactggtttt
aatattatgacagttgccaaaaacaatgtaatacacagaaactcataaat
gtttcattgcagatatataatacattcaatgtataattagatattgatat
atatgcacatagaatatatagcacacatatatgtaacatatttgtgtgtg
tgtatttatatatgtatctatttatttatcaatatatgtaacacatgtgt
atatatgatttctctccaaactaccatgaattgtaatctataattatact
tttttcagtatgcattactttataggatcaaaaccatgtcctcatgttac
atttacaaaacttgatggggaaaactgggaattctggccagtgttaacta
agcctgtgtaaaggtgaactaaatgttaaatgtcaacaaataaataacaa
aagatgaaaaatctaagtatgtaaatttaagggagagtgaaaaatgggaa
gaaaaacaggaagtttatgtacagaaagagaaatctaaaccacttaacac
tttaaagaaatagtatttttactccatcattttatatatgtataatgttc
acgggtatatataattcctgactcaaacaaaaattcattactggaataat
gtcatctcattttagtaaacatcacaaagtaagtatgctactacatgaac
tacgatagtactgacattttaaataacatcagaaattaatcaggcaattt
aatacaattttatttaaaaggtagtcataactttatacccattttaaaat
gtaaatacattaaaggatgtacagttttattgactctaataagccttcct
cccccccgaaaaataattgaaaaagtaaacctggaaaatgtgtttactag
ttgattttaaatataaatttttactcacttttaaataaaatataaaaatg
ccttactataacatcaaagtgtgttaattatttttggtgattcatcagaa
tttggaattcaaatatttctattttttaaattaaggtatttagctcattt
ccatttccaatgcctataccaa
gaattcctgatttttattttgcacgggctgtgtctgagaatgcactggtc
tatacctcagcaccccatttccagttgtaaaaaagagttctcattctgtc
atgcttgctgtgcaggaaggcgctgtttatagccatgaggtagtttaagt
tgcacttgtcatagcccctcgcctaatgaaaagaagctcatggttttctt
cttacccagaggttcaatacattgtcacttctactccaaagtttttcctt
caaaaaccaaagagatcattttctttttctttggataaactaaaactggg
ttttgaatacttattctctgagaaggatgacaatatagttttaataaagg
tttacacccttagaaatgcataacaatatactgaataggaatatagtaaa
accaatataatttgaaacttgtttatgaactaattgctcaatatttttga
gggaacctactagtataatctaattaatgttggaagcatataatcatgta
tgtatatatgtgtgtgtgtgtgtgtatatatatatatatatatatataca
cacacacacacacacacacacacacacacatacacacacacacacacata
tataaatagagagtgcgctcgcacaaatagagagagatggatatatacac
gcgtgtgaaagtatgtgtgtgtctctatatatatatatagaatattgatg
tatatatctgtgtgtgtgtgtgtgtatatatacaatatagagtcctctct
ctcagagagtgtgtaaaacacagagtgagtgtgtgtctataaaaaaaaaa
aaaactctctctatctctcgagtgaaaacttgcgacaagtgagagatgtg
tatatctgcggagagaagaaaaaagagacgtctttctctcgtgagggtgt
gagagaggtgtgtgtatactcacaccgtcatacagagcgcgcgcgcgcgc
gcgggcagacagagaggagagagatatatctctctaatatatgggagcgt
gtgtagtagaacaatatattcacacacacacgccgcgccacaataaacaa
gatactgctgagtcgttctatctgtctcatatattattatgtctggcggg
cgccagtgagacgactcatctatcgactggagtgacagaggcatcactca
gctatccacgcgtctagcgtcgtggccgcgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_113790300_113791420
seq2: B6Ng01-202I13.b_47_1168 (reverse)

seq1  TTGGTATA-GCATTGGAAATGTAAATGAGCTAAATACCTAATTTAAAAAA  49
      |||||||| |||||||||||| ||||||||||||||||| | || |||||
seq2  TTGGTATAGGCATTGGAAATGGAAATGAGCTAAATACCTTAATTTAAAAA  50

seq1  ATAAGAAATATTTGGATTTCAAATTCTGATGAATCA-CAAAAATAATTAA  98
      || ||||||||||| ||| ||||||||||||||||| |||||||||||||
seq2  AT-AGAAATATTTGAATTCCAAATTCTGATGAATCACCAAAAATAATTAA  99

seq1  CACACTTTGATGTTATAGTAAGGCATTTTTATATTTTTATTTAAAAGTGA  148
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CACACTTTGATGTTATAGTAAGGCATTTTTATA-TTTTATTTAAAAGTGA  148

seq1  GTAAAAATTTATATTTAAAATCAACTAGTAAACACATTTTCCAGGTTTAC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATTTATATTTAAAATCAACTAGTAAACACATTTTCCAGGTTTAC  198

seq1  TTTTTCAATTATTTTTAAAGACATATAATGGCTTATTAGAGTCAATAAAA  248
      ||||||||||||||||   |    |  | |||||||||||||||||||||
seq2  TTTTTCAATTATTTTTCGGGGGGGAGGAAGGCTTATTAGAGTCAATAAAA  248

seq1  CTGTACATCC-TTAATGTATTTACATTTTAAAATGGGTATAAAGTTATGA  297
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATCCTTTAATGTATTTACATTTTAAAATGGGTATAAAGTTATGA  298

seq1  CTACCTTTTAAATAAAATTGTATTAAATTGCCTGATTAATTTCTGATGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTTTAAATAAAATTGTATTAAATTGCCTGATTAATTTCTGATGTT  348

seq1  ATTTAAAATGTCAGTACTATCGTAGTTCATGTAGTAGCATACTTACTTTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATGTCAGTACTATCGTAGTTCATGTAGTAGCATACTTACTTTG  398

seq1  TGATGTTTACTAAAATGAGATGACATTATTCCAGTAATGAATTTTTGTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTACTAAAATGAGATGACATTATTCCAGTAATGAATTTTTGTTT  448

seq1  GAGTCAGGAATTATATATACCCGTGAACATTATACATATATAAAATGATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGAATTATATATACCCGTGAACATTATACATATATAAAATGATG  498

seq1  GAGTAAAAATACTATTTCTTTAAAGTGTTAAGTGGTTTAGATTTCTCTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAAAATACTATTTCTTTAAAGTGTTAAGTGGTTTAGATTTCTCTTT  548

seq1  CTGTACATAAACTTCCTGTTTTTCTTCCCATTTTTCACTCTCCCTTAAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATAAACTTCCTGTTTTTCTTCCCATTTTTCACTCTCCCTTAAAT  598

seq1  TTACATACTTAGATTTTTCATCTTTTGTTATTTATTTGTTGACATTTAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATACTTAGATTTTTCATCTTTTGTTATTTATTTGTTGACATTTAAC  648

seq1  ATTTAGTTCACCTTTACACAGGCTTAGTTAACACTGGCCAGAATTCCCAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTCACCTTTACACAGGCTTAGTTAACACTGGCCAGAATTCCCAG  698

seq1  TTTTCCCCATCAAGTTTTGTAAATGTAACATGAGGACATGGTTTTGATCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCATCAAGTTTTGTAAATGTAACATGAGGACATGGTTTTGATCC  748

seq1  TATAAAGTAATGCATACTGAAAAAAGTATAATTATAGATTACAATTCATG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGTAATGCATACTGAAAAAAGTATAATTATAGATTACAATTCATG  798

seq1  GTAGTTTGGAGAGAAATCATATATACACATGTGTTACATATATTGATAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTGGAGAGAAATCATATATACACATGTGTTACATATATTGATAAA  848

seq1  TAAATAGATACATATATAAATACACACACACAAATATGTTACATATATGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGATACATATATAAATACACACACACAAATATGTTACATATATGT  898

seq1  GTGCTATATATTCTATGTGCATATATATCAATATCTAATTATACATTGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATATATTCTATGTGCATATATATCAATATCTAATTATACATTGAA  948

seq1  TGTATTATATATCTGCAATGAAACATTTATGAGTTTCTGTGTATTACATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATATATCTGCAATGAAACATTTATGAGTTTCTGTGTATTACATT  998

seq1  GTTTTTGGCAACTGTCATAATATTAAAACCAGTGCTACTAATGGTAATGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGGCAACTGTCATAATATTAAAACCAGTGCTACTAATGGTAATGA  1048

seq1  AGCCGTTACACCTTGTATAAGATTACAACAGCATATGTGTCTAATTCTAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGTTACACCTTGTATAAGATTACAACAGCATATGTGTCTAATTCTAC  1098

seq1  CCCTTAAGACAAACTTATGAATTC  1121
      ||||||||||||||||||||||||
seq2  CCCTTAAGACAAACTTATGAATTC  1122