BAC Information

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BAC

Clone NameB6Ng01-203D13
Chromosome14 (Build37)
Map Location 73,260,052 - 73,261,143
singlet/doubletsinglet
Overlap geneLOC100043721
Upstream geneLOC668482, LOC675957, Fndc3a
Downstream geneLOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203D13.bB6Ng01-203D13.g
ACCGA023495GA023496
length1,0351,099
definitionB6Ng01-203D13.b B6Ng01-203D13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttggctctgtatcctattttttaatagggttatttgatt
ttctggagtccatcttcttgagttctttatatatattgaatattagtcct
ctatgtgatttaggattggtaaagatcctttcccaatctgttggtggccc
ttttgtcttattgacagtgccttttgccttacagaatctttgcaatttta
tgaggtcccatttgtcaattattgatcttacagcacaaatcattgctgtt
ctgtttaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtggggttccttaa
tccacttggacttgacaaggcgataagaatagatctatttgtattcttct
acatgataactgccagttgtgccagcaacatttgttgaaaatgctgtctt
ttttccactggatgattttagctcccttgtcaaagatcaagtgaccatag
gtgtgtgggttcatctctgggtcttcaattctattccattggtctacttg
tctatcgctataccagtaccatgcagtttttatcacaattgctctgtagt
aaagctttaggtcaggcatggtgattccaccagtggttcttttatcattg
agaagagtttttgctatcctaggttttttgttattccagatgaatctgct
gattgccctttctaattcgttgaagaattgagttggaattttgataggga
ttgcattgaatctgtagattgcttttggcaagatagccatctttactata
ttgatcttgccaatccatgagcattggagatctttccatcttctgagatc
tttaatttccttcttcagagacttgaagttcttatcatacagatctttca
cttccttagttagagtcacaccaagggtattttatgttatttgtgactat
tgtgaagggtgttgtttccctaatttctttctcagcctgttatccttttt
gtagagaaaggccatgattggaaaaaaaagaaacc
gaattcctatctcaaaaccagaaatggtcgcttaaattgagagttcttcc
tctaaaaattggtttcctatttaaattcttttccccactaccactgatgt
tgaagttatatatatataactagcaaactggacagttttatttccctcat
gaggcatttttaaaaggtcacttaagctggggagtgctggcagacacctt
taatcccagcacttgggaggcagaggcaggtagatctctgagtttgaggc
cagcctggtctatagagtgagttccaggacagccaagactccacagagaa
accctgtcttgaaaaaacaaaaaaacaaatgaaataaataagtaaataaa
gtaaaataaataaaagagcacttgaggagcctgcaaagcacaagggatac
aaagtgtttacggtccctgtaccacctttagacttgcttactaatccttc
agccctgacagataatctgccgtcctaatgaaggtctgtgcttcatcaac
tggaataacttgtgtatcagtcactgttaaggacacagcatatttttcta
cttttcagtaatgttagtgattgttccaaggagcaatcatggaattgtga
tgggcccaacagaagtatggcagtattgctgtattgctcttccaaaccac
ctacttagacaatggactacccaaccgacattgtagcttggtatgactgc
atgattaaattgttcccagtgaaaggtgagcaaattgacataggtaactt
tccccttatttaattgaagggaattgtttctttgggtctcccctttactg
tacaatggaatgcagcatgctagtgagacagctgagccatttggaagtgg
tacaggggctcagccagctgagccatctagaagtggtacagaggcttaga
ggagcagagcaagttgtagagacaaggaccctgaggaatcacatcccaaa
ccaaaatggtcacctttggactatttatagaaagaaaattgggttttggg
ttttaatttaaagccatttttatgcagttcttccttgttagttccaaatg
ttatataatccaatatactaagttagaaaatgcccactgagttagtcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73260052_73261143
seq2: B6Ng01-203D13.g_64_1162

seq1  GAATTCCTATCTCAAAACCAGAAATGGTCGCTTAAATTGAGAGTTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCTCAAAACCAGAAATGGTCGCTTAAATTGAGAGTTCTTCC  50

seq1  TCTAAAAATTGGTTTCCTATTTAAATTCTTTTCCCCACTACCACTGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAATTGGTTTCCTATTTAAATTCTTTTCCCCACTACCACTGATGT  100

seq1  TGAAGTTATATATATATAACTAGCAAACTGGACAGTTTTATTTCCCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTATATATATATAACTAGCAAACTGGACAGTTTTATTTCCCTCAT  150

seq1  GAGGCATTTTTAAAAGGTCACTTAAGCTGGGGAGTGCTGGCAGACACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATTTTTAAAAGGTCACTTAAGCTGGGGAGTGCTGGCAGACACCTT  200

seq1  TAATCCCAGCACTTGGGAGGCAGAGGCAGGTAGATCTCTGAGTTTGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTTGGGAGGCAGAGGCAGGTAGATCTCTGAGTTTGAGGC  250

seq1  CAGCCTGGTCTATAGAGTGAGTTCCAGGACAGCCAAGACTCCACAGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGTCTATAGAGTGAGTTCCAGGACAGCCAAGACTCCACAGAGAA  300

seq1  ACCCTGTCTTGAAAAAACAAAAAAACAAATGAAATAAATAAGTAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTTGAAAAAACAAAAAAACAAATGAAATAAATAAGTAAATAAA  350

seq1  GTAAAATAAATAAAAGAGCACTTGAGGAGCCTGCAAAGCACAAGGGATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATAAATAAAAGAGCACTTGAGGAGCCTGCAAAGCACAAGGGATAC  400

seq1  AAAGTGTTTACGGTCCCTGTACCACCTTTAGACTTGCTTACTAATCCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTTTACGGTCCCTGTACCACCTTTAGACTTGCTTACTAATCCTTC  450

seq1  AGCCCTGACAGATAATCTGCCGTCCTAATGAAGGTCTGTGCTTCATCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGACAGATAATCTGCCGTCCTAATGAAGGTCTGTGCTTCATCAAC  500

seq1  TGGAATAACTTGTGTATCAGTCACTGTTAAGGACACAGCATATTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAACTTGTGTATCAGTCACTGTTAAGGACACAGCATATTTTTCTA  550

seq1  CTTTTCAGTAATGTTAGTGATTGTTCCAAGGAGCAATCATGGAATTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTAATGTTAGTGATTGTTCCAAGGAGCAATCATGGAATTGTGA  600

seq1  TGGGCCCAACAGAAGTATGGCAGTATTGCTGTATTGCTCTTCCAAACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCCAACAGAAGTATGGCAGTATTGCTGTATTGCTCTTCCAAACCAC  650

seq1  CTACTTAGACAATGGACTACCCAACCGACATTGTAGCTTGGTATGACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAGACAATGGACTACCCAACCGACATTGTAGCTTGGTATGACTGC  700

seq1  ATGATTAAATTGTTCCCAGTGAAAGGTGAGCAAATTGACATAGGTAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAATTGTTCCCAGTGAAAGGTGAGCAAATTGACATAGGTAACTT  750

seq1  TCCCCTTATTTAATTGAAGGGAATTGTTTCTTTGGGTCTCCCCTTTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTATTTAATTGAAGGGAATTGTTTCTTTGGGTCTCCCCTTTACTG  800

seq1  TACAATGGAATGCAGCATGCTAGTGAGACAGCTGAGCCATTTGGAAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGGAATGCAGCATGCTAGTGAGACAGCTGAGCCATTTGGAAGTGG  850

seq1  TACAGGGGCTCAGCCAGCTGAGCCATCTAGAAGTGGTACAGAGGCTTAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGGGCTCAGCCAGCTGAGCCATCTAGAAGTGGTACAGAGGCTTAGA  900

seq1  GGAGCAGAGCAAGTTGTAGAGAACAAGGACCCTGAGGAATCACATCCCAA  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGAGCAGAGCAAGTTGTAGAG-ACAAGGACCCTGAGGAATCACATCCCAA  949

seq1  ACCAAAATGGTCACCTTTGGACTA-TTATAGAA--GAAATTGG--TTTTG  995
      |||||||||||||||||||||||| ||||||||   |||||||  ||| |
seq2  ACCAAAATGGTCACCTTTGGACTATTTATAGAAAGAAAATTGGGTTTTGG  999

seq1  GTTTTA--TTTAAGCCATTTTATTGCAGT--CTCCTTGTAGTTTCCAAAA  1041
      ||||||  || ||||||||||  ||||||   |||||||   |||| |||
seq2  GTTTTAATTTAAAGCCATTTTTATGCAGTTCTTCCTTGTTAGTTCC-AAA  1048

seq1  TGTTATATAAT-CAATATACTTAGTTAGAAAATGCCACTTGAGTTAAGTC  1090
      ||||||||||| ||||||||| ||||||||||||||   |||||| ||||
seq2  TGTTATATAATCCAATATACTAAGTTAGAAAATGCCCACTGAGTT-AGTC  1097

seq1  AG  1092
      ||
seq2  AG  1099