BAC Information

Click to search

BAC

Clone NameB6Ng01-203K05
Chromosome14 (Build37)
Map Location 22,315,591 - 22,469,108
singlet/doubletdoublet
Overlap geneMyst4
Upstream geneZmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl, Ap3m1, Adk
Downstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075, EG435392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203K05.bB6Ng01-203K05.g
ACCGA023799GA023800
length1451,172
definitionB6Ng01-203K05.b B6Ng01-203K05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,468,964 - 22,469,108)(22,315,591 - 22,316,776)
sequence
gaattcaagaggaaagatcctgtattggacaaagcaaagggcaggaagaa
cagaaagccatcttgtggttggcacacacacccccccaccccccactgtg
gtgtgtatgtatgtgtgtgttagagagaggaagagggagaaagtg
gaattcctcacagcctcggtcctggataagaaagttcaaggtctttatgt
ctgctgcttccttacccactttcccccaaatcagtgtgagtgtacctgga
actttttttttgttttttgagacagggtttctctgtgtagccctggctgt
catggaactcactttgtagaccaggctggcctcttcttatctgacttgtc
ttagagcaagtaaacaagccccaaagatcaaaactcctgtagttcccttt
ggctccttccccacctactctgccctttttttgttttgttgttgttaaag
ctcaaggacacatgggtcacacctcggaatcattccagtcctaattctgg
ctaagaaaatcatggaattatttctgttgagggggaagaattcagcctag
gctaacagttctcaaattcaaaaaactgagaatttcaatacaagtcttga
gctaacagttgtagatctggcaacccattccagagctactgaatcagaag
gtgggttgggccaaggatgctatctgggaagcatcccagatcattccgat
tccagtgatctgtggactgcactaaacagcacaaatagctgtcaatagtt
ctggcagaggctagctgttttccggtggtggtgaacaggtgagataagat
gctggtttatgatggtgcagaatgtgtgctatgcttggttttcaattctc
gctattcctaggttaacttaattgagctatttcactcagcagagacttga
gataccacagataagaaagaggtttaagagggagcagtgagtatctatct
ggctgcgtctctgttatcctctcagtcctacttatctgaagaggcagatt
atcaaaggacaagtaaccctccagggaatagcagtgggaaaactgttccc
ctttcttgccacacccgtttggataatttgttaggaaagacattacacta
tatttctgctttccgagtttctacatcacgaagatttagacaatgtcaat
ctattttttgctgtctccctgcctctcaggtggctggggcttgaccatga
gcattagcagttcctttaagagtctgaatactgtgatgctctgggaattc
ttgtgcacagttgagccaaggtccctggatcatcttagaccgtgaccagc
tcttatgtcaggccttcttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22468964_22469108
seq2: B6Ng01-203K05.b_42_186 (reverse)

seq1  CACTTTCTCCCTCTTCCTCTCTCTAACACACACATACATACACACCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTCCCTCTTCCTCTCTCTAACACACACATACATACACACCACAG  50

seq1  TGGGGGGTGGGGGGGTGTGTGTGCCAACCACAAGATGGCTTTCTGTTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGGTGGGGGGGTGTGTGTGCCAACCACAAGATGGCTTTCTGTTCTT  100

seq1  CCTGCCCTTTGCTTTGTCCAATACAGGATCTTTCCTCTTGAATTC  145
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCCTTTGCTTTGTCCAATACAGGATCTTTCCTCTTGAATTC  145

seq1: chr14_22315591_22316776
seq2: B6Ng01-203K05.g_66_1237

seq1  GAATTCCTCACAGCCTCGGTCCTGGATAAGAAAGTTCAAGGTCTTTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCACAGCCTCGGTCCTGGATAAGAAAGTTCAAGGTCTTTATGT  50

seq1  CTGCTGCTTCCTTACCCACTTTCCCCCAAATCAGTGTGAGTGTACCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTTCCTTACCCACTTTCCCCCAAATCAGTGTGAGTGTACCTGGA  100

seq1  ACTTTTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTTTTGTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGT  150

seq1  CATGGAACTCACTTTGTAGACCAGGCTGGCCTCTTCTTATCTGACTTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAACTCACTTTGTAGACCAGGCTGGCCTCTTCTTATCTGACTTGTC  200

seq1  TTAGAGCAAGTAAACAAGCCCCAAAGATCAAAACTCCTGTAGTTCCCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGCAAGTAAACAAGCCCCAAAGATCAAAACTCCTGTAGTTCCCTTT  250

seq1  GGCTCCTTCCCCACCTACTCTGCCCTTTTTTTGTTTTGTTGTTGTTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTTCCCCACCTACTCTGCCCTTTTTTTGTTTTGTTGTTGTTAAAG  300

seq1  CTCAAGGACACATGGGTCACACCTCGGAATCATTCCAGTCCTAATTCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGACACATGGGTCACACCTCGGAATCATTCCAGTCCTAATTCTGG  350

seq1  CTAAGAAAATCATGGAATTATTTCTGTTGAGGGGGAAGAATTCAGCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAAATCATGGAATTATTTCTGTTGAGGGGGAAGAATTCAGCCTAG  400

seq1  GCTAACAGTTCTCAAATTCAAAAAACTGAGAATTTCAATACAAGTCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGTTCTCAAATTCAAAAAACTGAGAATTTCAATACAAGTCTTGA  450

seq1  GCTAACAGTTGTAGATCTGGCAACCCATTCCAGAGCTACTGAATCAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACAGTTGTAGATCTGGCAACCCATTCCAGAGCTACTGAATCAGAAG  500

seq1  GTGGGTTGGGCCAAGGATGCTATCTGGGAAGCATCCCAGATCATTCCGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTTGGGCCAAGGATGCTATCTGGGAAGCATCCCAGATCATTCCGAT  550

seq1  TCCAGTGATCTGTGGACTGCACTAAACAGCACAAATAGCTGTCAATAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGATCTGTGGACTGCACTAAACAGCACAAATAGCTGTCAATAGTT  600

seq1  CTGGCAGAGGCTAGCTGTTTTCCGGTGGTGGTGAACAGGTGAGATAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGAGGCTAGCTGTTTTCCGGTGGTGGTGAACAGGTGAGATAAGAT  650

seq1  GCTGGTTTATGATGGTGCAGAATGTGTGCTATGCTTGGTTTTCAATTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTATGATGGTGCAGAATGTGTGCTATGCTTGGTTTTCAATTCTC  700

seq1  GCTATTCCTAGGTTAACTTAATTGAGCTATTTCACTCAGCAGAGACTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTCCTAGGTTAACTTAATTGAGCTATTTCACTCAGCAGAGACTTGA  750

seq1  GATACCACAGATAAGAAAGAGGTTTAAGAGGGAGCAGTGAGTATCTATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCACAGATAAGAAAGAGGTTTAAGAGGGAGCAGTGAGTATCTATCT  800

seq1  GGCTGCGTCTCTGTTATCCTCTCAGTCCTACTTATCTGAAGAGGCAGATT  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGCTGCGTCTCTGTTATCCTCTCAGTCCTACTTATCTGAAGAGGCAGA-T  849

seq1  TATCAAAGGACAAGTAACCCTCCAGGGGAATAGCAGTGGGAAAACTGTTC  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATCAAAGGACAAGTAACCCTCCA-GGGAATAGCAGTGGGAAAACTGTTC  898

seq1  CCCTTTCTTGCCACACCCG-TTGGATAATTTTGTTAGGAAAAGACATTAC  949
      ||||||||||||||||||| |||||||| ||||||||| |||||||||||
seq2  CCCTTTCTTGCCACACCCGTTTGGATAA-TTTGTTAGG-AAAGACATTAC  946

seq1  ACTATATTTCTGCTTTCCGAGTTTTCTACATCAACAAAGATTTAGACAAA  999
      ||||||||||||||||||||| |||||||||| || ||||||||||| ||
seq2  ACTATATTTCTGCTTTCCGAG-TTTCTACATC-ACGAAGATTTAGAC-AA  993

seq1  TGTCAATCTATTTTTTTGCTGTCTCCCTTGCTCTCAGGGTGGCTGGGGCT  1049
      |||||||||| |||||||||||||||||  |||||| |||||||||||||
seq2  TGTCAATCTA-TTTTTTGCTGTCTCCCTGCCTCTCA-GGTGGCTGGGGCT  1041

seq1  TGAACCATGAGCATTAAGCAAGTTCTTTAAAGAGTCTGATTACTGTGATG  1099
      || |||||||||||| ||| ||||| || |||||||||| ||||||||||
seq2  TG-ACCATGAGCATT-AGC-AGTTCCTTTAAGAGTCTGAATACTGTGATG  1088

seq1  CTCTGGAAATTCTTGTGCACAG-TGAGCCCAAGGGCCTGGGTTTCATCCT  1148
      |||||| ||||||||||||||| |||||| | |  |||||   |||| ||
seq2  CTCTGGGAATTCTTGTGCACAGTTGAGCCAAGGTCCCTGG--ATCAT-CT  1135

seq1  TAGCACTGTGA-CAGCTCTAAGTGTCAGGCCTTCCTTTT  1186
      ||| || |||| ||||||| | |||||||||||| ||||
seq2  TAG-ACCGTGACCAGCTCTTA-TGTCAGGCCTTCTTTTT  1172