BAC Information

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BAC

Clone NameB6Ng01-203P13
Chromosome14 (Build37)
Map Location 119,703,667 - 119,704,719
singlet/doubletsinglet
Overlap geneHs6st3
Upstream geneLOC435422, Abcc4, Cldn10, Dzip1, Dnajc3a, LOC100043828, Ugcgl2, LOC619601
Downstream geneEG621324, LOC100043830, Oxgr1, Gabarapl2-ps, LOC100043831, Mbnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203P13.bB6Ng01-203P13.g
ACCGA024042GA024043
length1,0631,008
definitionB6Ng01-203P13.b B6Ng01-203P13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgcttgcttcttccctgcctgccataagggatgagcttattt
gaaatggaggggaacgagttagctgtcaggaagaacttttgaggtgtaga
ttgggatgcattatggaggacatttacagaatgtatttgaagagatggtg
aggttgcttggcttcctagtctgatcagaggcggtcctgtggaatcagac
acgattgaagtgattttcgcacctagttttcagattacatcattttaagg
cagatacttcaaaaatggtgtcctaatacagacttgattgaaatatttac
cagagactctgcccctgaagcttctctggtttccagaaaattcagcgttt
gtttcctttttgatgtgtgaggaagaaacatgaatgtaccctttcaagta
aatgtaaggagtgtttttttagagactggaaaacagatgatggaaattgt
cttctgatccccagagaagggaccacacagaacttcggctttctcttcgg
gagggaaagcatttacattggagaagatttataactttatggcccagata
gtgacagcctcaaaaccttatttctgtgggactctgggtaatggtaatag
atttgcttggtgactgctaaaaacaaactcaggtgacaagggacagacta
gtcacagttttgtgaggatgcatccggccttgatgagtattagggggact
gttttgtacttgtttttgtgactccagggctgagtgagtgacaacttgag
tagccaatcagacatttacagggttttttttcctgattatataaagtctt
tccacaccaagtctttcctctgtgctgtaccctagaactcagtcactggt
ccttgtccctcctctttggtagtagtatgtctctttagtaggttcttgaa
aagaagaaaacacctgccatttgttgcagccttcttcttaccttcccttt
gataactccctctgtattgtgtgtgtcctgcatgtatatgagtggagtgc
aatatacatgtgtgtgtgtgcatgtctgggaatgagcatacattgtgtgc
atgtatgtgaatg
gaattcctgatcttttcaagatttttaacatgaagggatattgaattttg
tcaaatgattttcagcatctaatgaaatgttcatgtggttattttctttg
aatttgtttatttagtgtattacattgatggatttccatatattgaacca
tccctacattcctgggatgaagcctaattgatcatggtgaatgatcgttt
gatgaattcttggattcagttggcaagaattttattgagtatttttgcat
caatattcataagggaaattgttctgaagttttctttctttgttggtcct
ttatgtggtttacatataagtgtaattgtggctccatagaaaaaattggg
tagtgttatttctgtttctattttgtggaaattttgaagaatattggtat
taggtcttctttgaaagtctgatagaattctgcactaaaaccatctggtc
ccgggctttttctggttgggagattttaatgtctgctgctatttctttag
gggttatgggactctttagatgttttaactggtcctgatttaactttggt
acctggtatctgtctagaaaattgtccattttatccagattttccagttg
tgttaagtataggcttttgtagtaggatctgatgatttttttaatttcct
caatttctgttattatatctcccttttcatttctgattttgttaatttgg
gtactgtctctgtgccttctgattagtctggctaaggatttatctatctt
ttttattttctcaagaaccagctcctggtttggttgattttctgtaacgt
ttgttttgttcaattggttgattttctgccctgagtttgattatttctgc
tgcctcctccttgttggggtgtatttgcttcttttttgttctagagcttt
tcagatgtgctgttaaatttcaagtgtatgctttctcccaggttctttta
ggaatcacatcttcatgatgaatggatagaagaaatttaggaaccatata
attaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_119703667_119704719
seq2: B6Ng01-203P13.b_46_1108

seq1  GAATTCTTTGCTTGCTTCTTCCCTGCCTGCCATAAGGGATGAGCTTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTGCTTCTTCCCTGCCTGCCATAAGGGATGAGCTTATTT  50

seq1  GAAATGGAGGGGAACGAGTTAGCTGTCAGGAAGAACTTTTGAGGTGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGAGGGGAACGAGTTAGCTGTCAGGAAGAACTTTTGAGGTGTAGA  100

seq1  TTGGGATGCATTATGGAGGACATTTACAGAATGTATTTGAAGAGATGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATGCATTATGGAGGACATTTACAGAATGTATTTGAAGAGATGGTG  150

seq1  AGGTTGCTTGGCTTCCTAGTCTGATCAGAGGCGGTCCTGTGGAATCAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGCTTGGCTTCCTAGTCTGATCAGAGGCGGTCCTGTGGAATCAGAC  200

seq1  ACGATTGAAGTGATTTTCGCACCTAGTTTTCAGATTACATCATTTTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTGAAGTGATTTTCGCACCTAGTTTTCAGATTACATCATTTTAAGG  250

seq1  CAGATACTTCAAAAATGGTGTCCTAATACAGACTTGATTGAAATATTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTTCAAAAATGGTGTCCTAATACAGACTTGATTGAAATATTTAC  300

seq1  CAGAGACTCTGCCCCTGAAGCTTCTCTGGTTTCCAGAAAATTCAGCGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACTCTGCCCCTGAAGCTTCTCTGGTTTCCAGAAAATTCAGCGTTT  350

seq1  GTTTCCTTTTTGATGTGTGAGGAAGAAACATGAATGTACCCTTTCAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTTTTGATGTGTGAGGAAGAAACATGAATGTACCCTTTCAAGTA  400

seq1  AATGTAAGGAGTGTTTTTTTAGAGACTGGAAAACAGATGATGGAAATTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGGAGTGTTTTTTTAGAGACTGGAAAACAGATGATGGAAATTGT  450

seq1  CTTCTGATCCCCAGAGAAGGGACCACACAGAACTTCGGCTTTCTCTTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATCCCCAGAGAAGGGACCACACAGAACTTCGGCTTTCTCTTCGG  500

seq1  GAGGGAAAGCATTTACATTGGAGAAGATTTATAACTTTATGGCCCAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAGCATTTACATTGGAGAAGATTTATAACTTTATGGCCCAGATA  550

seq1  GTGACAGCCTCAAAACCTTATTTCTGTGGGACTCTGGGTAATGGTAATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCCTCAAAACCTTATTTCTGTGGGACTCTGGGTAATGGTAATAG  600

seq1  ATTTGCTTGGTGACTGCTAAAAACAAACTCAGGTGACAAGGGACAGACTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTGGTGACTGCTAAAAACAAACTCAGGTGACAAGGGACAGACTA  650

seq1  GTCACAGTTTTGTGAGGATGCATCCGGCCTTGATGAGTATTAGGGGGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGTTTTGTGAGGATGCATCCGGCCTTGATGAGTATTAGGGGGACT  700

seq1  GTTTTGTACTTGTTTTTGTGACTCCAGGGCTGAGTGAGTGACAACTTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTACTTGTTTTTGTGACTCCAGGGCTGAGTGAGTGACAACTTGAG  750

seq1  TAGCCAATCAGACATTTACAGGGTTTTTTTTCCTGATTATATAAAGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAATCAGACATTTACAGGGTTTTTTTTCCTGATTATATAAAGTCTT  800

seq1  TCCACACCAAGTCTTTCCTCTGTGCTGTACCCTAGAACTCAGTCACTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACCAAGTCTTTCCTCTGTGCTGTACCCTAGAACTCAGTCACTGGT  850

seq1  CCTTGTCCCTCCTCTTTGGTAGTAGTATGTCTCTTTAGTAGGTTCTTG-A  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCTTGTCCCTCCTCTTTGGTAGTAGTATGTCTCTTTAGTAGGTTCTTGAA  900

seq1  TAGAAG-AAACACCTGCCATT--GTGCAGCC-TCTTC-TAACTTCCC-TT  943
       ||||| ||||||||||||||   ||||||| ||||| || |||||| ||
seq2  AAGAAGAAAACACCTGCCATTTGTTGCAGCCTTCTTCTTACCTTCCCTTT  950

seq1  GATAACTCCCTCTGTA-TGTGTGTGT-CTGCATGTATATGAGT-GAGTGC  990
      |||||||||||||||| ||||||||| |||||||||||||||| ||||||
seq2  GATAACTCCCTCTGTATTGTGTGTGTCCTGCATGTATATGAGTGGAGTGC  1000

seq1  -ATATACATGTGTGTGTGTGCATGTCTGTGAGTGTGCATACATTTGTGTG  1039
       ||||||||||||||||||||||||||| || || ||||||| |||||||
seq2  AATATACATGTGTGTGTGTGCATGTCTGGGAATGAGCATACA-TTGTGTG  1049

seq1  CATGTATGTGAATG  1053
      ||||||||||||||
seq2  CATGTATGTGAATG  1063