BAC Information

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BAC

Clone NameB6Ng01-203P21
Chromosome14 (Build37)
Map Location 12,976,360 - 12,977,437
singlet/doubletsinglet
Overlap genePtprg
Upstream geneFhit, LOC667030, EG382843, LOC100042427, LOC667059, LOC100041996, LOC100042441
Downstream gene3830406C13Rik, EG667072, Fezf2, Cadps, EG432822, LOC100042022, LOC100042026
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203P21.bB6Ng01-203P21.g
ACCGA024058GA024059
length1,0801,169
definitionB6Ng01-203P21.b B6Ng01-203P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctaaattcccacagagatggagtgaagattttactctgaata
gaagatgggggcagaggtttgccgaacagggagtgaattggattctgaga
aggagacaggcagaagggcctgctttgacagcacattccatttcctaaga
atttctagaggcttttctttccttttgaggcatacaaaattcatttatta
tttctgccacatgtcaggagcgctgactcaggacagcgcccatctctacc
ttttggtgaccacaaggcattttccagctgtgtctctcagtccacactgt
cgtcacagccccgtgggtggtattcattgttttttttctaagagaaattc
atgaagcctgtagctcagtgacatgaccttaactctctgttcccgtgagg
aagctgttcccagttgtagcaaccagtgttgccatggtcacatgctaata
ccagtatagggaggggattatggtcgctatacaaggaaaatcctcttgat
agttgagtttagattggcccagggtacacatgtctgcaagaagatcaggg
atctcttagaaagatcccctggagaccagtggaagcgtccgctgcttgtt
tctccagaagcagcctgctctgtagctatgttctgtttcctcagtgttaa
tgtctgttgaagtgaagcatcaaggaatggtgacctggatgtgggcaatg
gtgtccgatgacagttagcaagcgataatctaggaagggccagacagtgg
gtattttgggctttcaggccatgtggcctgtcataacttcttaaccttgt
cagtaattgagtgaaagtatatagagcacacgcgtgagcgtgcacacaca
cacacacacacacaccaccaccaccaccaacatttatgcctatgtgccag
taaaactgtatttctactagttgttagccgtcctggtctatcatgcaggc
tctagcttgctgacccttgctgctgctaaggttcactgttcctgtgagca
gagttgaagtgccctgtgttacacagccctgttacatggcctatgccctg
tttgacaccagccaattgaagtagcaaaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atgaggagctagagaagtaccaggagctaaagggatcttcaacctatagt
gaacaacatatgactaccagtacccctgagctctgactctagctgcatat
gtatcaaaggatgctagtcgtcaatcactgaagagagtccaatgaactcg
ccgaactgagtcctgttacaggcaatcgtcaaggcctaaggaggcgcaac
tgtggcgtgctatagcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_12976360_12977437
seq2: B6Ng01-203P21.b_45_1124

seq1  GAATTCTCCTAAATTCCCACAGAGATGGAGTGAAGATTTTACTCTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAAATTCCCACAGAGATGGAGTGAAGATTTTACTCTGAATA  50

seq1  GAAGATGGGGGCAGAGGTTTGCCGAACAGGGAGTGAATTGGATTCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGGGGGCAGAGGTTTGCCGAACAGGGAGTGAATTGGATTCTGAGA  100

seq1  AGGAGACAGGCAGAAGGGCCTGCTTTGACAGCACATTCCATTTCCTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGACAGGCAGAAGGGCCTGCTTTGACAGCACATTCCATTTCCTAAGA  150

seq1  ATTTCTAGAGGCTTTTCTTTCCTTTTGAGGCATACAAAATTCATTTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGAGGCTTTTCTTTCCTTTTGAGGCATACAAAATTCATTTATTA  200

seq1  TTTCTGCCACATGTCAGGAGCGCTGACTCAGGACAGCGCCCATCTCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCACATGTCAGGAGCGCTGACTCAGGACAGCGCCCATCTCTACC  250

seq1  TTTTGGTGACCACAAGGCATTTTCCAGCTGTGTCTCTCAGTCCACACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGACCACAAGGCATTTTCCAGCTGTGTCTCTCAGTCCACACTGT  300

seq1  CGTCACAGCCCCGTGGGTGGTATTCATTGTTTTTTTTCTAAGAGAAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCACAGCCCCGTGGGTGGTATTCATTGTTTTTTTTCTAAGAGAAATTC  350

seq1  ATGAAGCCTGTAGCTCAGTGACATGACCTTAACTCTCTGTTCCCGTGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCTGTAGCTCAGTGACATGACCTTAACTCTCTGTTCCCGTGAGG  400

seq1  AAGCTGTTCCCAGTTGTAGCAACCAGTGTTGCCATGGTCACATGCTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTCCCAGTTGTAGCAACCAGTGTTGCCATGGTCACATGCTAATA  450

seq1  CCAGTATAGGGAGGGGATTATGGTCGCTATACAAGGAAAATCCTCTTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTATAGGGAGGGGATTATGGTCGCTATACAAGGAAAATCCTCTTGAT  500

seq1  AGTTGAGTTTAGATTGGCCCAGGGTACACATGTCTGCAAGAAGATCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGTTTAGATTGGCCCAGGGTACACATGTCTGCAAGAAGATCAGGG  550

seq1  ATCTCTTAGAAAGATCCCCTGGAGACCAGTGGAAGCGTCCGCTGCTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTAGAAAGATCCCCTGGAGACCAGTGGAAGCGTCCGCTGCTTGTT  600

seq1  TCTCCAGAAGCAGCCTGCTCTGTAGCTATGTTCTGTTTCCTCAGTGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGAAGCAGCCTGCTCTGTAGCTATGTTCTGTTTCCTCAGTGTTAA  650

seq1  TGTCTGTTGAAGTGAAGCATCAAGGAATGGTGACCTGGATGTGGGCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTGAAGTGAAGCATCAAGGAATGGTGACCTGGATGTGGGCAATG  700

seq1  GTGTCCGATGACAGTTAGCAAGCGATAATCTAGGAAGGGCCAGACAGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCGATGACAGTTAGCAAGCGATAATCTAGGAAGGGCCAGACAGTGG  750

seq1  GTATTTTGGGCTTTCAGGCCATGTGGCCTGTCATAACTTCTTAACCTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGGGCTTTCAGGCCATGTGGCCTGTCATAACTTCTTAACCTTGT  800

seq1  CAGTAATTGAGTGAAAGTATATAGAGCACACGCGTGAGCGTGCACACACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATTGAGTGAAAGTATATAGAGCACACGCGTGAGCGTGCACACACA  850

seq1  CACACACACACACACCACCACCACCACCAACATTTATGCCTATGTGCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACCACCACCACCACCAACATTTATGCCTATGTGCCAG  900

seq1  TAAAACTGTATTTCTACTAGTTGTTAGCCGTCCTGGTCTATCATGCAGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGTATTTCTACTAGTTGTTAGCCGTCCTGGTCTATCATGCAGGC  950

seq1  TCTAGCTTGCTGACCCTTGCTGCTGCT-AGGTTCACTGTTCCTGTGAGCA  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTAGCTTGCTGACCCTTGCTGCTGCTAAGGTTCACTGTTCCTGTGAGCA  1000

seq1  GAGTTTGAGTGGCCTGTGTTACACAGCCTTGTTACATGG-CTATG-CCTG  1047
      |||||  |||| |||||||||||||||| |||||||||| ||||| ||||
seq2  GAGTTGAAGTGCCCTGTGTTACACAGCCCTGTTACATGGCCTATGCCCTG  1050

seq1  -TTGACA-CAGCATATTTGAAAGTAGCAGAAGA  1078
       |||||| ||||  |||   |||||||| ||||
seq2  TTTGACACCAGCCAATT--GAAGTAGCA-AAGA  1080