BAC Information

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BAC

Clone NameB6Ng01-204L14
Chromosome14 (Build37)
Map Location 111,749,708 - 111,884,562
singlet/doubletdoublet
Overlap genenone
Upstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
Downstream geneSlitrk5, LOC100043501, EG223186
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204L14.bB6Ng01-204L14.g
ACCGA024590GA024591
length1,117341
definitionB6Ng01-204L14.b B6Ng01-204L14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,749,708 - 111,750,812)(111,884,216 - 111,884,562)
sequence
gaattccataaacaagtacaaaccacaaaggcaacagttctctaactctt
ctaaacttctttactcgaacttcatatctccttccagtagagttagagac
actgtaatccctcctcgtcctcaccgagtgggattccaccttgaccctta
agcatggccaagagaatttccacctctaaccttctataggtggatgccct
tattgctgacttctatgcactacacaggcatactgaaaacacaacaaaag
tcacaaacaacaagctaatttcagatgccccatctcactggaaaaaaaga
caaataacaaaaatataagaaactataccctccaaaaatcattaatctca
cttttccaataacttaaatatttgcttttttctgacatgttttatatttt
gtcaccatttaatttccttccactgttttgtgtctttccatcattttcag
ttagaaatagtctcctttctgatgcactgttcatgaattagacaatctcc
aagcaatcactgagaatttgaccggtgagtgttaattaaatgtccacatt
cagaatcgtcaggtaatttttatttattatctgagatactgacattgatt
ttaagaagaggttggatgaattaataagtagctctactgggctagaaatt
aatgctaatatcagatttattcaaataaatattgagagatgttaaattta
tatggaaatagaagttgttttttatttacaatttctaaaatgagaaaaaa
taattacattcaaccaattttattactttaaagattacaatattattatg
caaagctcttaaaattaccaagaaatataactcatgacaatgcactgtgt
aaattttttatatgcatgcataatttactaagagaattcagtctcagata
aaaaatagatgctttttagctaacataaatattacatgattaaccattga
aacaaaacatgcctttatttaatattaaccccatattatctcctttttta
ttagggttctagttattaattgacaacaaagggctttcaaactcttattt
aatactgaaataaaagtatatgaatattgggaaaaaattgaatgaaatag
acctgaatatcatgaga

actttgagaccttttgcccattaaacaagacataatttttaaaacaaaga
ttatttacatagccgacaaattattgttatatttcaaaattatactatac
tgagttgccagatatttttgtcagggaaaaaaaacactgacatctggttg
tttaatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgttctctgaactaa
tttgtctttctgaaaagtgagtaaatttaaattttagaattatcagaata
ccgagtaaaaatgtaggcaacttcagatgatttcttgagtctcttagtgg
aaacgttaagtgttaaatgagggtggtgggtgcttgttcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_111749708_111750812
seq2: B6Ng01-204L14.b_44_1160

seq1  GAATTCCATAAACAAGTACAAACCACAAAGGCAACAGTTCTCTAACTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAACAAGTACAAACCACAAAGGCAACAGTTCTCTAACTCTT  50

seq1  CTAAACTTCTTTACTCGAACTTCATATCTCCTTCCAGTAGAGTTAGAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTCTTTACTCGAACTTCATATCTCCTTCCAGTAGAGTTAGAGAC  100

seq1  ACTGTAATCCCTCCTCGTCCTCACCGAGTGGGATTCCACCTTGACCCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAATCCCTCCTCGTCCTCACCGAGTGGGATTCCACCTTGACCCTTA  150

seq1  AGCATGGCCAAGAGAATTTCCACCTCTAACCTTCTATAGGTGGATGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCCAAGAGAATTTCCACCTCTAACCTTCTATAGGTGGATGCCCT  200

seq1  TATTGCTGACTTCTATGCACTACACAGGCATACTGAAAACACAACAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGACTTCTATGCACTACACAGGCATACTGAAAACACAACAAAAG  250

seq1  TCACAAACAACAAGCTAATTTCAGATGCCCCATCTCACTGGAAAAAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACAACAAGCTAATTTCAGATGCCCCATCTCACTGGAAAAAAAGA  300

seq1  CAAATAACAAAAATATAAGAAACTATACCCTCCAAAAATCATTAATCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACAAAAATATAAGAAACTATACCCTCCAAAAATCATTAATCTCA  350

seq1  CTTTTCCAATAACTTAAATATTTGCTTTTTTCTGACATGTTTTATATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCAATAACTTAAATATTTGCTTTTTTCTGACATGTTTTATATTTT  400

seq1  GTCACCATTTAATTTCCTTCCACTGTTTTGTGTCTTTCCATCATTTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCATTTAATTTCCTTCCACTGTTTTGTGTCTTTCCATCATTTTCAG  450

seq1  TTAGAAATAGTCTCCTTTCTGATGCACTGTTCATGAATTAGACAATCTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAATAGTCTCCTTTCTGATGCACTGTTCATGAATTAGACAATCTCC  500

seq1  AAGCAATCACTGAGAATTTGACCGGTGAGTGTTAATTAAATGTCCACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATCACTGAGAATTTGACCGGTGAGTGTTAATTAAATGTCCACATT  550

seq1  CAGAATCGTCAGGTAATTTTTATTTATTATCTGAGATACTGACATTGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCGTCAGGTAATTTTTATTTATTATCTGAGATACTGACATTGATT  600

seq1  TTAAGAAGAGGTTGGATGAATTAATAAGTAGCTCTACTGGGCTAGAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGAGGTTGGATGAATTAATAAGTAGCTCTACTGGGCTAGAAATT  650

seq1  AATGCTAATATCAGATTTATTCAAATAAATATTGAGAGATGTTAAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAATATCAGATTTATTCAAATAAATATTGAGAGATGTTAAATTTA  700

seq1  TATGGAAATAGAAGTTGTTTTTTATTTACAATTTCTAAAATGAGAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAATAGAAGTTGTTTTTTATTTACAATTTCTAAAATGAGAAAAAA  750

seq1  TAATTACATTCAACCAATTTTATTACTTTAAAGATTACAATATTATTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACATTCAACCAATTTTATTACTTTAAAGATTACAATATTATTATG  800

seq1  CAAAGCTCTTAAAATTACCAAGAAATATAACTCATGACAATGCACTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTCTTAAAATTACCAAGAAATATAACTCATGACAATGCACTGTGT  850

seq1  AAATTTTTTATATGCATGCATAA-TTACTAAGAGAATTCAGTCTCAGAT-  898
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  AAATTTTTTATATGCATGCATAATTTACTAAGAGAATTCAGTCTCAGATA  900

seq1  AAAAATAGATGC-TTTTAGCTAACATAAATATTACATGATT-ACCATTGA  946
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  AAAAATAGATGCTTTTTAGCTAACATAAATATTACATGATTAACCATTGA  950

seq1  AACAAAAACATG-CTTTATTTAATAT--AACCCATATTATCTCTTTTTAT  993
      ||| |||||||| |||||||||||||  | ||||||||||||| |||| |
seq2  AAC-AAAACATGCCTTTATTTAATATTAACCCCATATTATCTCCTTTTTT  999

seq1  A----GGTTCTAG-TATT-ATTGACAACAAAAGGGTTTCAACTTCTTTAT  1037
      |    |||||||| |||| |||||||||||| || ||||||  || ||||
seq2  ATTAGGGTTCTAGTTATTAATTGACAACAAAGGGCTTTCAAACTC-TTAT  1048

seq1  CTTATTTTTGAAATAAAAGTATATGAATAT--GGAAAATATTGAAATGAA  1085
       ||| |  ||||||||||||||||||||||  |||||| |||| ||||||
seq2  -TTAATACTGAAATAAAAGTATATGAATATTGGGAAAAAATTG-AATGAA  1096

seq1  ATAGACCTG-ATATCATGAGA  1105
      ||||||||| |||||||||||
seq2  ATAGACCTGAATATCATGAGA  1117


seq1: chr14_111884216_111884562
seq2: B6Ng01-204L14.g_66_412 (reverse)

seq1  ATGAACAAGCACCCACCTCCCTCATTTAACACTTAACGTTTCCACTAAGA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGAACAAGCACCCACCACCCTCATTTAACACTTAACGTTTCCACTAAGA  50

seq1  GACTCAAGAAATCATCTGAAGTTGCCTACATTTTTACTCGGTATTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGAAATCATCTGAAGTTGCCTACATTTTTACTCGGTATTCTGAT  100

seq1  AATTCTAAAATTTAAATTTACTCACTTTTCAGAAAGACAAATTAGTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAAATTTAAATTTACTCACTTTTCAGAAAGACAAATTAGTTCAG  150

seq1  AGAACACACACACACACACACACACACACACATATATTAAACAACCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACACACACACACACACACACACACACATATATTAAACAACCAGAT  200

seq1  GTCAGTGTTTTTTTTCCCTGACAAAAATATCTGGCAACTCAGTATAGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGTTTTTTTTCCCTGACAAAAATATCTGGCAACTCAGTATAGTAT  250

seq1  AATTTTGAAATATAACAATAATTTGTCGGCTATGTAAATAATCTTTGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAAATATAACAATAATTTGTCGGCTATGTAAATAATCTTTGTTT  300

seq1  TAAAAATTATGTCTTGTTTAATGGGCAAAAGGTCTCAAAGTGAATTC  347
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATTATGTCTTGTTTAATGGGCAAAAGGTCTCAAAGTGAATTC  347


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