BAC Information

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BAC

Clone NameB6Ng01-205F23
Chromosome14 (Build37)
Map Location 21,808,839 - 22,020,896
singlet/doubletdoublet
Overlap geneVcl, Ap3m1, Adk
Upstream gene1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119
Downstream geneMyst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, 1700112E06Rik, EG665075
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205F23.bB6Ng01-205F23.g
ACCGA025071GA025072
length1,1211,107
definitionB6Ng01-205F23.b B6Ng01-205F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,019,779 - 22,020,896)(21,808,839 - 21,809,964)
sequence
gaattctcaaagcaacttttaagaaaatgcagcaaaacaaatacaaatag
aagcacagaactgttatttatgaggaggagcttatgagtggcaatgcaca
atgaatgggatacccacacctattagaacacttgaacagtacactaccaa
gtacatcatcattgggaacagaaatgtaaaactaaaatctaaatgtgtag
gaaacctaagtcattacgtcacccatacatccatcacagtgcatcaagga
aaataacttcaattctgcataatgccatagcgacatacgataagtatgag
tcacactgtatttacatatttactctgaatatgtgacattgtgttggcta
atttttatgtcagcattaccaggttagaggcatttgggaagagggaatct
caactgagaaaatgcaccccctctccctggtctgtaggcaagcctgtggt
acattttctagactggagacttatgtaggagggcactgccacctctggga
tgttggccctaggtgcgatctgaagcagattaagcaggtcagaaaaacaa
gacagtgagcagaagcactccttcatggcctcttcagttccctcttggac
atcctgccgcagcttccttcaatgaaagactgaaatctgagttgtgctgc
aataaaccatttcctccaaagttgtctgtggttgtggtctgtaacatagc
agtagaacctctaatctatacagaaataaagataattagatatagaatga
actgaatactacagtcactaagaagttgtttatggaagtgcttcctgaaa
ttgatgtttgctgtacatgcgtctttgtttgagataatgcagctctgcct
ggcctggacctcaatttggggccctcagattttttttttaactatttctg
agccaatatttaaatgttgtgcataattgtactattcaatatctagggga
aacaagcaatagtattggttaagtaagcctactctgcatgactctgacag
cgttttagcattcaaatattagattagcaatgaacatgctattataaata
attttatgacagtgtaaaagtagaacggacttgaaagcaaggtctctgat
ggcagcaacgagtcctctgtt
gaattccaaatctttcttttctgaagtgtaaacagtaaagtagtcagatc
tggggtctgtctgttgccaccagattcccatcctgttcaatgcagttttc
agtacctccgtccctacccataagtaattaactttgtcttcccgtacttg
tttcatgcttccccattggtgcagtactcttctggaaagtgaaggttcct
ctagaaaagtgggggaagaaagtaagtggaacaaattcttgataaaaata
cgtcttctgaataagttcagatttcgacgaggcaatgcatagctgcatag
tgtacctgttaaacctacattcaactctcaggttcacacatttaatatta
attttacgtacttcatttctgttgaaaggaaaaactatcccttaaatcaa
gagtcatttagagtgatcattaaagtgaagccagcattttttcctgggac
aatgttatgaatcaatacaactcttactttactctgcaaatttagaactc
tgtacttagtcttttaaaaaattatttatattacgtatattttgatacat
gttgggagatgagagacaaataaaagcattttatcgctcacggttttttt
gagccttacagaggtagcttttcatgctgagccatcagatactgtgactc
atgattggttcttgtggtgagtctcctgctggggtctaggctggtgatgg
gcagtgactgactaggatgccttccacatgagattattgctcttttcaac
aagaaggaaatactgttagattttgctgtcctgtgacatcctcactgcag
accattaggatttaagggttgaatttaattttgattactttaaaaaagat
caggttgtatgtaagcttagaacatgttttgagtattctcaggtttgttt
tagccctcaaataaataagacatttatctataggagtttgggctaagtag
ttaactcagcattgtgatgtttgtttacctctcaagagggatcgcaatgc
taaggaatgtgtttccatctgatctagtatcttagctggtccactgtcag
gtctgctcataactgggtagtcattaaatgcgaagctttatcaggggagg
agaaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_22019779_22020896
seq2: B6Ng01-205F23.b_46_1166 (reverse)

seq1  AACAGAGGGCTCGTTGCTGCTTCTCAGAGA-CTTGCTTTC-AGTTCG-TC  47
      |||||||| |||||||||||   ||||||| ||||||||| ||| || ||
seq2  AACAGAGGACTCGTTGCTGC-CATCAGAGACCTTGCTTTCAAGTCCGTTC  49

seq1  TACTTTTACACTGTCATAAA--TATTTAT-ATAGCATGTTCATTGCTAAT  94
      ||||||||||||||||||||  ||||||| ||||||||||||||||||||
seq2  TACTTTTACACTGTCATAAAATTATTTATAATAGCATGTTCATTGCTAAT  99

seq1  CTAATATTTGAATGCTTAAAACGGCTGTCAGAGTCATGCAGAGTAGGCTT  144
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  CTAATATTTGAATGC-TAAAAC-GCTGTCAGAGTCATGCAGAGTAGGCTT  147

seq1  ACTTAACCAATACTATTGCTTG-TTCCCCTAGATATTGAATAGTACAATT  193
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACTTAACCAATACTATTGCTTGTTTCCCCTAGATATTGAATAGTACAATT  197

seq1  ATGCACAACATTTAAATATTGGCTCAGAAATAGTTTAAAAAAAAAATCTG  243
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATGCACAACATTTAAATATTGGCTCAGAAATAG-TTAAAAAAAAAATCTG  246

seq1  AGGGCCCCAAATTGAGGTCCAGGCCAGGCAGAGCTGCATTATCTCAAACA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCCCAAATTGAGGTCCAGGCCAGGCAGAGCTGCATTATCTCAAACA  296

seq1  AAGACGCATGTACAGCAAACATCAATTTCAGGAAGCACTTCCATAAACAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACGCATGTACAGCAAACATCAATTTCAGGAAGCACTTCCATAAACAA  346

seq1  CTTCTTAGTGACTGTAGTATTCAGTTCATTCTATATCTAATTATCTTTAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGTGACTGTAGTATTCAGTTCATTCTATATCTAATTATCTTTAT  396

seq1  TTCTGTATAGATTAGAGGTTCTACTGCTATGTTACAGACCACAACCACAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATAGATTAGAGGTTCTACTGCTATGTTACAGACCACAACCACAG  446

seq1  ACAACTTTGGAGGAAATGGTTTATTGCAGCACAACTCAGATTTCAGTCTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTGGAGGAAATGGTTTATTGCAGCACAACTCAGATTTCAGTCTT  496

seq1  TCATTGAAGGAAGCTGCGGCAGGATGTCCAAGAGGGAACTGAAGAGGCCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAGGAAGCTGCGGCAGGATGTCCAAGAGGGAACTGAAGAGGCCA  546

seq1  TGAAGGAGTGCTTCTGCTCACTGTCTTGTTTTTCTGACCTGCTTAATCTG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAGTGCTTCTGCTCACTGTCTTGTTTTTCTGACCTGCTTAATCTG  596

seq1  CTTCAGATCGCACCTAGGGCCAACATCCCAGAGGTGGCAGTGCCCTCCTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGATCGCACCTAGGGCCAACATCCCAGAGGTGGCAGTGCCCTCCTA  646

seq1  CATAAGTCTCCAGTCTAGAAAATGTACCACAGGCTTGCCTACAGACCAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTCTCCAGTCTAGAAAATGTACCACAGGCTTGCCTACAGACCAGG  696

seq1  GAGAGGGGGTGCATTTTCTCAGTTGAGATTCCCTCTTCCCAAATGCCTCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGGGTGCATTTTCTCAGTTGAGATTCCCTCTTCCCAAATGCCTCT  746

seq1  AACCTGGTAATGCTGACATAAAAATTAGCCAACACAATGTCACATATTCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTAATGCTGACATAAAAATTAGCCAACACAATGTCACATATTCA  796

seq1  GAGTAAATATGTAAATACAGTGTGACTCATACTTATCGTATGTCGCTATG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAATATGTAAATACAGTGTGACTCATACTTATCGTATGTCGCTATG  846

seq1  GCATTATGCAGAATTGAAGTTATTTTCCTTGATGCACTGTGATGGATGTA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATGCAGAATTGAAGTTATTTTCCTTGATGCACTGTGATGGATGTA  896

seq1  TGGGTGACGTAATGACTTAGGTTTCCTACACATTTAGATTTTAGTTTTAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGACGTAATGACTTAGGTTTCCTACACATTTAGATTTTAGTTTTAC  946

seq1  ATTTCTGTTCCCAATGATGATGTACTTGGTAGTGTACTGTTCAAGTGTTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGTTCCCAATGATGATGTACTTGGTAGTGTACTGTTCAAGTGTTC  996

seq1  TAATAGGTGTGGGTATCCCATTCATTGTGCATTGCCACTCATAAGCTCCT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGTGTGGGTATCCCATTCATTGTGCATTGCCACTCATAAGCTCCT  1046

seq1  CCTCATAAATAACAGTTCTGTGCTTCTATTTGTATTTGTTTTGCTGCATT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATAAATAACAGTTCTGTGCTTCTATTTGTATTTGTTTTGCTGCATT  1096

seq1  TTCTTAAAAGTTGCTTTGAGAATTC  1118
      |||||||||||||||||||||||||
seq2  TTCTTAAAAGTTGCTTTGAGAATTC  1121

seq1: chr14_21808839_21809964
seq2: B6Ng01-205F23.g_68_1174

seq1  GAATTCCAAATCTTTCTTTTCTGAAGTGTAAACAGTAAAGTAGTCAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATCTTTCTTTTCTGAAGTGTAAACAGTAAAGTAGTCAGATC  50

seq1  TGGGGTCTGTCTGTTGCCACCAGATTCCCATCCTGTTCAATGCAGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTCTGTCTGTTGCCACCAGATTCCCATCCTGTTCAATGCAGTTTTC  100

seq1  AGTACCTCCGTCCCTACCCATAAGTAATTAACTTTGTCTTCCCGTACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCTCCGTCCCTACCCATAAGTAATTAACTTTGTCTTCCCGTACTTG  150

seq1  TTTCATGCTTCCCCATTGGTGCAGTACTCTTCTGGAAAGTGAAGGTTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGCTTCCCCATTGGTGCAGTACTCTTCTGGAAAGTGAAGGTTCCT  200

seq1  CTAGAAAAGTGGGGGAAGAAAGTAAGTGGAACAAATTCTTGATAAAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAGTGGGGGAAGAAAGTAAGTGGAACAAATTCTTGATAAAAATA  250

seq1  CGTCTTCTGAATAAGTTCAGATTTCGACGAGGCAATGCATAGCTGCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCTGAATAAGTTCAGATTTCGACGAGGCAATGCATAGCTGCATAG  300

seq1  TGTACCTGTTAAACCTACATTCAACTCTCAGGTTCACACATTTAATATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTGTTAAACCTACATTCAACTCTCAGGTTCACACATTTAATATTA  350

seq1  ATTTTACGTACTTCATTTCTGTTGAAAGGAAAAACTATCCCTTAAATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACGTACTTCATTTCTGTTGAAAGGAAAAACTATCCCTTAAATCAA  400

seq1  GAGTCATTTAGAGTGATCATTAAAGTGAAGCCAGCATTTTTTCCTGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTTAGAGTGATCATTAAAGTGAAGCCAGCATTTTTTCCTGGGAC  450

seq1  AATGTTATGAATCAATACAACTCTTACTTTACTCTGCAAATTTAGAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATGAATCAATACAACTCTTACTTTACTCTGCAAATTTAGAACTC  500

seq1  TGTACTTAGTCTTTTAAAAAATTATTTATATTACGTATATTTTGATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTAGTCTTTTAAAAAATTATTTATATTACGTATATTTTGATACAT  550

seq1  GTTGGGAGATGAGAGACAAATAAAAGCATTTTATCGCTCACGGTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGAGATGAGAGACAAATAAAAGCATTTTATCGCTCACGGTTTTTTT  600

seq1  GAGCCTTACAGAGGTAGCTTTTCATGCTGAGCCATCAGATACTGTGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTACAGAGGTAGCTTTTCATGCTGAGCCATCAGATACTGTGACTC  650

seq1  ATGATTGGTTCTTGTGGTGAGTCTCCTGCTGGGGTCTAGGCTGGTGATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGGTTCTTGTGGTGAGTCTCCTGCTGGGGTCTAGGCTGGTGATGG  700

seq1  GCAGTGACTGACTAGGATGCCTTCCACATGAGATTATTGCTCTTTTCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGACTGACTAGGATGCCTTCCACATGAGATTATTGCTCTTTTCAAC  750

seq1  AAGAAGGAAATACTGTTAGATTTTGCTGTCCTGTGACATCCTCACTGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGAAATACTGTTAGATTTTGCTGTCCTGTGACATCCTCACTGCAG  800

seq1  ACCATTAGGATTTAAGGGTTGAATTTAATTTTGATTACTTTAAAAAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTAGGATTTAAGGGTTGAATTTAATTTTGATTACTTTAAAAAAGAT  850

seq1  CAGGTTGTATGTAAGCTTAGAACATGTTTTTGAGTATTCTCAGGTTTTGT  900
      |||||||||||||||||||||||||| ||||||||||||||||| |||||
seq2  CAGGTTGTATGTAAGCTTAGAACATG-TTTTGAGTATTCTCAGG-TTTGT  898

seq1  TTTAGCCCTC-AATAAATAAGACATTTATCTATAGGAGTTT-GGCTAAGT  948
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  TTTAGCCCTCAAATAAATAAGACATTTATCTATAGGAGTTTGGGCTAAGT  948

seq1  AGTTAACTCAGGCATTTGTGATGTTTTGTTTACCTCTCAAGGAGGGAATC  998
      |||||||||| ||| |||||||| |||||||||||||||| ||||||   
seq2  AGTTAACTCA-GCA-TTGTGATG-TTTGTTTACCTCTCAA-GAGGGA--T  992

seq1  CGCAAATGCTAAAGGAATTGGTGTTTCCCATCTGATCTAGGTTATCTTTA  1048
      ||| |||||| |||||||  |||||| |||||||||||||  |||| |||
seq2  CGC-AATGCT-AAGGAAT--GTGTTT-CCATCTGATCTAG--TATC-TTA  1034

seq1  GCTGGTCCACCTGTCAGTTCTGCTCATAAATGGTGTAGGTATTTAGAATT  1098
      ||||||||| ||||||| ||||||||||| ||| ||||  |||   || |
seq2  GCTGGTCCA-CTGTCAGGTCTGCTCATAACTGG-GTAGTCATT---AAAT  1079

seq1  GTGAAGCTTTTATCA-GGGAGGAGAAACC  1126
      | ||||| ||||||| |||||||||||||
seq2  GCGAAGC-TTTATCAGGGGAGGAGAAACC  1107