BAC Information

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BAC

Clone NameB6Ng01-205O18
Chromosome14 (Build37)
Map Location 20,714,273 - 20,830,961
singlet/doubletdoublet
Overlap geneGng2
Upstream geneUbe2e2, LOC627741, LOC100042299, LOC675069, LOC100042322, LOC632470, EG632477, EG632498, EG667341, LOC667344, LOC619996, EG434616, LOC675165, 1700110I01Rik, EG664814, LOC100039452, LOC100038983, LOC100039441, EG432825, LOC673583, EG664855, Nid2, 2700060E02Rik, LOC100039534
Downstream gene1810063B07Rik, Kcnk5, LOC100039106, Kcnk16, Nudt13, Ecd, AA536717, Dnajc9, Mrps16, Ttc18, Anxa7, Zmynd17, Ppp3cb, Usp54, Myoz1, Synpo2l, Sec24c, Fut11, Chchd1, 2310021P13Rik, Ndst2, Camk2g, Plau, EG620119, Vcl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205O18.bB6Ng01-205O18.g
ACCGA025472GA025473
length9501,136
definitionB6Ng01-205O18.b B6Ng01-205O18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,714,273 - 20,714,821)(20,829,835 - 20,830,961)
sequence
gaattcttcatggctggagaaggtgagctgaatcattctcagaccactgc
cttcagtttctgataaaccatatctcccatttcccctaaggaaatacaag
cagtcattaatagtctcccaaccaaaaaaagcccaggaccagatgggttt
agtatagagttctatcagaccttcaaagaagacctaattccaattctcct
caaactattccacaaaatagaaacagaaggttctctacccaattcattct
atgaagccacaattactctgatacctaaaccacacaaagttccaacaaag
aaagagaacttcagaccaatttcccttatgaatatcgatgcataaaactc
aataaaatcctcgcaaaccaaatccaagaacacatcaaaacgatcaacca
tcatgaccaagttggcttcatcccagggatgcagggatcatttaatatac
ggaaatccatcaacgtaatccactatataaacaaactcaaagacaaaaac
cacatgatcatctcgttagatgctgagaaagcatttgacaaaatccaaca
ccccttcatgatagaagtcttggaaagatgaggaattcaaggcccatacc
taaacataataaaagcaatatacagcaaaccagtagccaacattaaagta
aatggagagaaactcgaagcaatcccactaaaatcagggactagacaagg
ctgcccactttctccctacctattcaacatagtacttgaagtcctagcca
gagcaattcaacaacaaaaggagatcaaggggatacaaattggaaaggaa
gaagtcaaaatttcactatttgcagatgatatgatagtatatataagtga
ccctaaaaaattccacaagagaactctctaaacctgataaacagcttcag
tgcagtagctggatataaaattaaactcaaaaaatcagtgggcctttctt

gaattcagtaagagaagtaggtttcagctcactttgttaaagcttggcag
tcactaaatgggaagagagaaaggcatgctagtcctggtgatctttggga
gcaaacgtgctggcaggactcatagctgctgacaggcatccacaaatgac
aactaactctcttctgagcctcggaaaggccaaagaaagaaaagctggct
actgtgctggatggtcacctgtacgtatgttcaaatattccaggaatgtg
gcaggattttggaattgtgggggaacttacaatgctgaccatatgtctag
agcatcagtgttaacaaagaaattaaaaaaaaatgggtctgggtggtagt
ggtgcactcctttcgtcccagcacgtgggaggcaggggcaggaggatctc
tatgagttcaaggccagcctggattatttggaactacagagcaagctcca
ggacagccagggctacacagagaaaccctgtcttgaaaaacaaaaccaga
caaaacgggaacacccagcagaacaaaagttaacggaggaaatccttgtt
tgtctgtgatgaaaagcagagcacagagctgtgtgtactctgctccgaat
ccccggctcctatctagggctatgtacgggagagagaggccagcagcagg
gcagaagcaagagatcatgtatgtttagtaaggcaggcttcatccaaggg
tagtgggaagacattgtcaagaagaaaacattggctatagcccagcttta
cctagcatgcatgaaacatcgggtttttatcaccagtattttagtgttta
tgctgctatgaagagtcaccatgaccatgacactctttagaaaataaggc
atttatttgggggcttgcttacagtttcagagatttagtccattcccatc
atggcaggaaccctggtgacttgcaagtgaacatggctgcaggagaagta
gcttgagaagtttctatacccagattctgaagaacagaaaaggagaagag
cactggggcctgcctgggtcctaaaatcctcgagttccacctccagtgac
cacacttcttccaacaggccacaccctctaatcaatctcaatagtgcatt
cctggatgaacgacattccaaatcatggagtccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_20714273_20714821
seq2: B6Ng01-205O18.b_52_600

seq1  GAATTCTTCATGGCTGGAGAAGGTGAGCTGAATCATTCTCAGACCACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATGGCTGGAGAAGGTGAGCTGAATCATTCTCAGACCACTGC  50

seq1  CTTCAGTTTCTGATAAACCATATCTCCCATTTCCCCTAAGGAAATACAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTTCTGATAAACCATATCTCCCATTTCCCCTAAGGAAATACAAG  100

seq1  CAGTCATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGATGGGTTT  150

seq1  AGTATAGAGTTCTATCAGACCTTCAAAGAAGACCTAATTCCAATTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGAGTTCTATCAGACCTTCAAAGAAGACCTAATTCCAATTCTCCT  200

seq1  CAAACTATTCCACAAAATAGAAACAGAAGGTTCTCTACCCAATTCATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTATTCCACAAAATAGAAACAGAAGGTTCTCTACCCAATTCATTCT  250

seq1  ATGAAGCCACAATTACTCTGATACCTAAACCACACAAAGTTCCAACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCACAATTACTCTGATACCTAAACCACACAAAGTTCCAACAAAG  300

seq1  AAAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCATAAAACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAACTTCAGACCAATTTCCCTTATGAATATCGATGCATAAAACTC  350

seq1  AATAAAATCCTCGCAAACCAAATCCAAGAACACATCAAAACGATCAACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATCCTCGCAAACCAAATCCAAGAACACATCAAAACGATCAACCA  400

seq1  TCATGACCAAGTTGGCTTCATCCCAGGGATGCAGGGATCATTTAATATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACCAAGTTGGCTTCATCCCAGGGATGCAGGGATCATTTAATATAC  450

seq1  GGAAATCCATCAACGTAATCCACTATATAAACAAACTCAAAGACAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCCATCAACGTAATCCACTATATAAACAAACTCAAAGACAAAAAC  500

seq1  CACATGATCATCTCGTTAGATGCTGAGAAAGCATTTGACAAAATCCAAC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATCATCTCGTTAGATGCTGAGAAAGCATTTGACAAAATCCAAC  549

seq1: chr14_20829835_20830961
seq2: B6Ng01-205O18.g_70_1205 (reverse)

seq1  CATGGACTCGTAGATTT-GAATGTTTGGTCACCAGGGAATGGCACTATTT  49
      |||||||||   ||||| ||||| | | ||| |  ||||| |||||| ||
seq2  CATGGACTCCATGATTTGGAATG-TCGTTCATCCAGGAAT-GCACTA-TT  47

seq1  GAGA-TGATTAGGGGGTGTGGCCTTGTTGGAGGAAGTGT-GTCACTGGAG  97
      |||| ||||||| |||||||||| ||||||| ||||||| ||||||||||
seq2  GAGATTGATTAGAGGGTGTGGCC-TGTTGGAAGAAGTGTGGTCACTGGAG  96

seq1  GTGAACTTCGAGATTTTAAGGACCCAAGCCAGGCCCAGTG--CCTCTCTC  145
      ||| |  |||||  ||| |||||||| ||  | |||||||  | ||||  
seq2  GTGGAACTCGAGGATTTTAGGACCCAGGCAGGCCCCAGTGCTCTTCTCCT  146

seq1  TTTCTG-TCTTCAG-ATCTGGGTATAGAA--CTCTC-AGCTACTTCTCCT  190
      |||||| ||||||| ||||||||||||||   |||| |||||||||||||
seq2  TTTCTGTTCTTCAGAATCTGGGTATAGAAACTTCTCAAGCTACTTCTCCT  196

seq1  GCAGCCATGTTCACTTGCAAGTCACCAGGGTTCCTGCCATGATGGAAATG  240
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCAGCCATGTTCACTTGCAAGTCACCAGGGTTCCTGCCATGATGGGAATG  246

seq1  GACTAAATCTCTGAAACTGTAAGCAAG-CCCCAAATAAATGCCTTATTTT  289
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GACTAAATCTCTGAAACTGTAAGCAAGCCCCCAAATAAATGCCTTATTTT  296

seq1  CT-AAGAGTTGTCATGGTCATGGTGACTCTTCATAGCAGCAT-AACACTA  337
      || ||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  CTAAAGAG-TGTCATGGTCATGGTGACTCTTCATAGCAGCATAAACACTA  345

seq1  AAATACTGGTGATAAAAACCCGATGTTTCATGCATGCTAGGT-AAGCTGG  386
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAATACTGGTGATAAAAACCCGATGTTTCATGCATGCTAGGTAAAGCTGG  395

seq1  GCTATAGCCAATGTTTTCTTCTTGACAATGTCTTCCCACTACCCTTGGAT  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAGCCAATGTTTTCTTCTTGACAATGTCTTCCCACTACCCTTGGAT  445

seq1  GAAGCCTGCCTTACTAAACATACATGATCTCTTGCTTCTGCCCTGCTGCT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTGCCTTACTAAACATACATGATCTCTTGCTTCTGCCCTGCTGCT  495

seq1  GGCCTCTCTCTCCCGTACATAGCCCTAGATAGGAGCCGGGGATTCGGAGC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTCTCTCCCGTACATAGCCCTAGATAGGAGCCGGGGATTCGGAGC  545

seq1  AGAGTACACACAGCTCTGTGCTCTGCTTTTCATCACAGACAAACAAGGAT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACACACAGCTCTGTGCTCTGCTTTTCATCACAGACAAACAAGGAT  595

seq1  TTCCTCCGTTAACTTTTGTTCTGCTGGGTGTTCCCGTTTTGTCTGGTTTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCGTTAACTTTTGTTCTGCTGGGTGTTCCCGTTTTGTCTGGTTTT  645

seq1  GTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAGCTTG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAGCTTG  695

seq1  CTCTGTAGTTCCAAATAATCCAGGCTGGCCTTGAACTCATAGAGATCCTC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTAGTTCCAAATAATCCAGGCTGGCCTTGAACTCATAGAGATCCTC  745

seq1  CTGCCCCTGCCTCCCACGTGCTGGGACGAAAGGAGTGCACCACTACCACC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCTGCCTCCCACGTGCTGGGACGAAAGGAGTGCACCACTACCACC  795

seq1  CAGACCCATTTTTTTTTAATTTCTTTGTTAACACTGATGCTCTAGACATA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCATTTTTTTTTAATTTCTTTGTTAACACTGATGCTCTAGACATA  845

seq1  TGGTCAGCATTGTAAGTTCCCCCACAATTCCAAAATCCTGCCACATTCCT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGCATTGTAAGTTCCCCCACAATTCCAAAATCCTGCCACATTCCT  895

seq1  GGAATATTTGAACATACGTACAGGTGACCATCCAGCACAGTAGCCAGCTT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATTTGAACATACGTACAGGTGACCATCCAGCACAGTAGCCAGCTT  945

seq1  TTCTTTCTTTGGCCTTTCCGAGGCTCAGAAGAGAGTTAGTTGTCATTTGT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTGGCCTTTCCGAGGCTCAGAAGAGAGTTAGTTGTCATTTGT  995

seq1  GGATGCCTGTCAGCAGCTATGAGTCCTGCCAGCACGTTTGCTCCCAAAGA  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCTGTCAGCAGCTATGAGTCCTGCCAGCACGTTTGCTCCCAAAGA  1045

seq1  TCACCAGGACTAGCATGCCTTTCTCTCTTCCCATTTAGTGACTGCCAAGC  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAGGACTAGCATGCCTTTCTCTCTTCCCATTTAGTGACTGCCAAGC  1095

seq1  TTTAACAAAGTGAGCTGAAACCTACTTCTCTTACTGAATTC  1127
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAAAGTGAGCTGAAACCTACTTCTCTTACTGAATTC  1136