BAC Information

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BAC

Clone NameB6Ng01-205P10
Chromosome14 (Build37)
Map Location 80,475,808 - 80,590,297
singlet/doubletdoublet
Overlap genenone
Upstream gene1300010F03Rik, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560, Sugt1, Lect1, Pcdh8, EG629734, Olfm4
Downstream geneLOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205P10.bB6Ng01-205P10.g
ACCGA025504GA025505
length1,150964
definitionB6Ng01-205P10.b B6Ng01-205P10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,589,147 - 80,590,297)(80,475,808 - 80,476,748)
sequence
gaattctctaagagcctcaaagacaacaaccacaatgtgcttcttaaaac
aggtactgctcaagttgtcttaaaaatcaagtaagattcaaaagcctcca
aatcttcagttttctatacggagggattaaacagatgttcgtggtgccaa
tgaacatgtaaaacgtagaaagaactatcattaacttaatcttggaagca
tttagcttgtgctgttggcacaaaagaacaacacaggttgctgaacacct
ggacacagaaggataaaaactagaggatcagagacaagaaggacaagttt
taaagtaatcaacatttagttagtattattatcatttaaacatcagcatc
tgctgaagcccatgtgccacaagctaaccccaccatagattattattatt
attattatattacaccaactcccagtgatgtatctttacagccaagattg
atacattcactgaaacagtgaagtgttttagttggttgattgattggctg
ggtttgtttatttgcttatttgtatgcaataaataacaactaacaaagag
acatacaattgcttaaaatataaaaaaaaataagagactacagcttgtat
ttaaccctaatgggacacttcttctttccagggctcagagatcatcaaga
aagaggacccaagagaaagattttaagacccagaagtggtggatgactac
agtaaaccagggttttttcagaaagaaggcaggttcacatatgaactcac
agcagttgtggcagcactcgcaagatccatacaagctcagaccagacaaa
tccagaatggaaggagaaaatggggcatagaatctgaacccaaggtgcag
aactattggtaactaataactgctaagagacagagagttagttttcttta
aaggaggtgagttctagtaaggttaatcgtgcttcctgttgataggcatg
cacctaagaattctaggcagcataagtttggactcgataaggttaaaaaa
catgaggacacagagtaagtgagtacagaagaatatgatcaaaaccaaag
tctgaactctccaagaatgataaaaaaaaaattaaaatcttcactccaca
aaacatactacctgggagggtgaatgactttaaaggtgggactattggag

gaattctgtacaataagggttacttccttcaggctatagttaatcttgat
cttgtttataacttttctcttcccaatggatttataaaatccttcccatt
gccacattgcagttcagaaagacagattagaagaaaaaaatgtcacctcc
aagtgagtacacccagccactgtcaccagagtacactttagaggcaacta
aatcgcctcagaaataagcttgatgacttaaaggtaaactcagagctgag
ttggctgagatactgaaaattctctgatctttggttgaaagccctcatat
aaagaagcatccttggcagagcacagtggcgtcagatgtttgtaaaacca
agaaggccatcagcaaatcgtgcagcccccaggcaaaggggaaaagcaaa
tttgcacagtctccgtggaaagacatttacaagtttcacccattcagaga
taagaaggcatcttagttttgcattccattgatgtgattagacaccatga
cttaaagccatttggggaggaaagggtttatttcagattacagctcgtag
gtcagaccccgccatggatgggaactcaggcaggaacctgaaagcaagaa
ctgaagcagaggacttggagagccctacttactgcttgctccttgtggtt
tgctggacctctttctttctttctttctttttttttttttaaagatttat
ttatttatttattatatgtaagtacactgtagctgtcttcagacactcca
gaagagggcatcagatctttgttacggatggttgtgagccaccatgtggt
tgctggggttttgaactccggaccttttggaagagcagtcggggtgctct
ttatccactgagccatttcaccagccttggacctggtttcttatataaac
ccagaagtgggcacctgttcccggtgaacgtgggccctctacccttcaat
caataaattaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_80589147_80590297
seq2: B6Ng01-205P10.b_44_1193 (reverse)

seq1  CTCCAATTAGTCCCCACCCTTTAAAAGTCCTATCA-CCTCCCA-GTAGTG  48
      |||||| |||| ||||||  || |||||| | ||| ||||||| ||||| 
seq2  CTCCAA-TAGT-CCCACC--TTTAAAGTCAT-TCACCCTCCCAGGTAGT-  44

seq1  ATG-TTTGTGGAGTGAGATTTTTAAATTTTTTTTTATCAATTCTTTGAGA  97
      ||| ||||||||||||   |||||| |||||||||||| |||||| ||| 
seq2  ATGTTTTGTGGAGTGAAGATTTTAATTTTTTTTTTATC-ATTCTTGGAG-  92

seq1  AGTTCAGACTTTGTGTTTTGATCATA-TCTTCTGTACTCACTTAACTCTG  146
      ||||||||||||| |||||||||||| |||||||||||||||| ||||||
seq2  AGTTCAGACTTTG-GTTTTGATCATATTCTTCTGTACTCACTT-ACTCTG  140

seq1  TGTCCTCATTGTTTTTAACC-TATCGAGTCC-AACTTATGCTGCCTAGAA  194
      |||||||||  ||||||||| |||||||||| |||||||||||||||| |
seq2  TGTCCTCATGTTTTTTAACCTTATCGAGTCCAAACTTATGCTGCCTAG-A  189

seq1  ATTCTTA-GTGCATGCCTATCAACAGG-AGCACGATTAACC-TACTAGAA  241
      ||||||| ||||||||||||||||||| ||||||||||||| ||||||||
seq2  ATTCTTAGGTGCATGCCTATCAACAGGAAGCACGATTAACCTTACTAGAA  239

seq1  CTCACCTCC-TTAAAGAAAACTAACTCTCTGTCTCTTAGCAGTTATTAGT  290
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTCCTTTAAAGAAAACTAACTCTCTGTCTCTTAGCAGTTATTAGT  289

seq1  TACCAATAGTTCTGCACCTTGGGTTCAGATTCTATGCCCCATTTTCTCCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATAGTTCTGCACCTTGGGTTCAGATTCTATGCCCCATTTTCTCCT  339

seq1  TCCATTCTGGATTTGTCTGGTCTGAGCTTGTATGGATCTTGCGAGTGCTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTGGATTTGTCTGGTCTGAGCTTGTATGGATCTTGCGAGTGCTG  389

seq1  CCACAACTGCTGTGAGTTCATATGTGAACCTGCCTTCTTTCTGAAAAAAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTGCTGTGAGTTCATATGTGAACCTGCCTTCTTTCTGAAAAAAC  439

seq1  CCTGGTTTACTGTAGTCATCCACCACTTCTGGGTCTTAAAATCTTTCTCT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTACTGTAGTCATCCACCACTTCTGGGTCTTAAAATCTTTCTCT  489

seq1  TGGGTCCTCTTTCTTGATGATCTCTGAGCCCTGGAAAGAAGAAGTGTCCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTCTTTCTTGATGATCTCTGAGCCCTGGAAAGAAGAAGTGTCCC  539

seq1  ATTAGGGTTAAATACAAGCTGTAGTCTCTTATTTTTTTTTATATTTTAAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGTTAAATACAAGCTGTAGTCTCTTATTTTTTTTTATATTTTAAG  589

seq1  CAATTGTATGTCTCTTTGTTAGTTGTTATTTATTGCATACAAATAAGCAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTATGTCTCTTTGTTAGTTGTTATTTATTGCATACAAATAAGCAA  639

seq1  ATAAACAAACCCAGCCAATCAATCAACCAACTAAAACACTTCACTGTTTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAAACCCAGCCAATCAATCAACCAACTAAAACACTTCACTGTTTC  689

seq1  AGTGAATGTATCAATCTTGGCTGTAAAGATACATCACTGGGAGTTGGTGT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATGTATCAATCTTGGCTGTAAAGATACATCACTGGGAGTTGGTGT  739

seq1  AATATAATAATAATAATAATAATCTATGGTGGGGTTAGCTTGTGGCACAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATAATAATAATAATAATCTATGGTGGGGTTAGCTTGTGGCACAT  789

seq1  GGGCTTCAGCAGATGCTGATGTTTAAATGATAATAATACTAACTAAATGT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAGCAGATGCTGATGTTTAAATGATAATAATACTAACTAAATGT  839

seq1  TGATTACTTTAAAACTTGTCCTTCTTGTCTCTGATCCTCTAGTTTTTATC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACTTTAAAACTTGTCCTTCTTGTCTCTGATCCTCTAGTTTTTATC  889

seq1  CTTCTGTGTCCAGGTGTTCAGCAACCTGTGTTGTTCTTTTGTGCCAACAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGTCCAGGTGTTCAGCAACCTGTGTTGTTCTTTTGTGCCAACAG  939

seq1  CACAAGCTAAATGCTTCCAAGATTAAGTTAATGATAGTTCTTTCTACGTT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCTAAATGCTTCCAAGATTAAGTTAATGATAGTTCTTTCTACGTT  989

seq1  TTACATGTTCATTGGCACCACGAACATCTGTTTAATCCCTCCGTATAGAA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGTTCATTGGCACCACGAACATCTGTTTAATCCCTCCGTATAGAA  1039

seq1  AACTGAAGATTTGGAGGCTTTTGAATCTTACTTGATTTTTAAGACAACTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGATTTGGAGGCTTTTGAATCTTACTTGATTTTTAAGACAACTT  1089

seq1  GAGCAGTACCTGTTTTAAGAAGCACATTGTGGTTGTTGTCTTTGAGGCTC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTACCTGTTTTAAGAAGCACATTGTGGTTGTTGTCTTTGAGGCTC  1139

seq1  TTAGAGAATTC  1151
      |||||||||||
seq2  TTAGAGAATTC  1150

seq1: chr14_80475808_80476748
seq2: B6Ng01-205P10.g_66_1017

seq1  GAATTCTGTACAATAAGGGTTACTTCCTTCAGGCTATAGTTAATCTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTACAATAAGGGTTACTTCCTTCAGGCTATAGTTAATCTTGAT  50

seq1  CTTGTTTATAACTTTTCTCTTCCCAATGGATTTATAAAATCCTTCCCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTATAACTTTTCTCTTCCCAATGGATTTATAAAATCCTTCCCATT  100

seq1  GCCACATTGCAGTTCAGAAAGACAGATTAGAAGAAAAAAATGTCACCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACATTGCAGTTCAGAAAGACAGATTAGAAGAAAAAAATGTCACCTCC  150

seq1  AAGTGAGTACACCCAGCCACTGTCACCAGAGTACACTTTAGAGGCAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTACACCCAGCCACTGTCACCAGAGTACACTTTAGAGGCAACTA  200

seq1  AATCGCCTCAGAAATAAGCTTGATGACTTAAAGGTAAACTCAGAGCTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGCCTCAGAAATAAGCTTGATGACTTAAAGGTAAACTCAGAGCTGAG  250

seq1  TTGGCTGAGATACTGAAAATTCTCTGATCTTTGGTTGAAAGCCCTCATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGAGATACTGAAAATTCTCTGATCTTTGGTTGAAAGCCCTCATAT  300

seq1  AAAGAAGCATCCTTGGCAGAGCACAGTGGCGTCAGATGTTTGTAAAACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCATCCTTGGCAGAGCACAGTGGCGTCAGATGTTTGTAAAACCA  350

seq1  AGAAGGCCATCAGCAAATCGTGCAGCCCCCAGGCAAAGGGGAAAAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCCATCAGCAAATCGTGCAGCCCCCAGGCAAAGGGGAAAAGCAAA  400

seq1  TTTGCACAGTCTCCGTGGAAAGACATTTACAAGTTTCACCCATTCAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCACAGTCTCCGTGGAAAGACATTTACAAGTTTCACCCATTCAGAGA  450

seq1  TAAGAAGGCATCTTAGTTTTGCATTCCATTGATGTGATTAGACACCATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGCATCTTAGTTTTGCATTCCATTGATGTGATTAGACACCATGA  500

seq1  CTTAAAGCCATTTGGGGAGGAAAGGGTTTATTTCAGATTACAGCTCGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGCCATTTGGGGAGGAAAGGGTTTATTTCAGATTACAGCTCGTAG  550

seq1  GTCAGACCCCGCCATGGATGGGAACTCAGGCAGGAACCTGAAAGCAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACCCCGCCATGGATGGGAACTCAGGCAGGAACCTGAAAGCAAGAA  600

seq1  CTGAAGCAGAGGACTTGGAGAGCCCTACTTACTGCTTGCTCCTTGTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCAGAGGACTTGGAGAGCCCTACTTACTGCTTGCTCCTTGTGGTT  650

seq1  TGCTGGACCTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAAGATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGACCTCTTTCTTTCTTTCTTTCTTTTTTTTTTTTTAAAGATTTAT  700

seq1  TTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCA  750

seq1  GAAGAGGGCATCAGATC-TTGTTACGGATGGTTGTGAGCCACCATGTGGT  799
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAAGAGGGCATCAGATCTTTGTTACGGATGGTTGTGAGCCACCATGTGGT  800

seq1  TGCTGGGG-TTTGAACTCCGGACC-TTTGGAAGAGCAGTC-GGGTGCTC-  845
      |||||||| ||||||||||||||| ||||||||||||||| |||||||| 
seq2  TGCTGGGGTTTTGAACTCCGGACCTTTTGGAAGAGCAGTCGGGGTGCTCT  850

seq1  TTACCCACTGAGCCATCTCACCAGCCCTGGACCT-GTTTCTTATAT-AAC  893
      ||| |||||||||||| ||||||||| ||||||| ||||||||||| |||
seq2  TTATCCACTGAGCCATTTCACCAGCCTTGGACCTGGTTTCTTATATAAAC  900

seq1  CCAGAGGT-GGCA-CTGCTCCCGGTGAACG-GGGCCCT-TACACATCAAT  939
      ||||| || |||| ||| |||||||||||| ||||||| ||| | |||||
seq2  CCAGAAGTGGGCACCTGTTCCCGGTGAACGTGGGCCCTCTACCCTTCAAT  950

seq1  CA  941
      ||
seq2  CA  952