BAC Information

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BAC

Clone NameB6Ng01-206F10
Chromosome14 (Build37)
Map Location 71,476,583 - 71,609,722
singlet/doubletdoublet
Overlap genenone
Upstream geneEgr3, Bin3, 2610301G19Rik, 9930012K11Rik, Pdlim2, Sorbs3, Ppp3cc, LOC100043115, Slc39a14, EG668450, Piwil2, Polr3d, Phyhip, Bmp1, Sftpc, Lgi3, Reep4, Hr, Nudt18, Rai16, Epb4.9, Fgf17, Npm2, Xpo7, LOC668443, Dok2, Gfra2
Downstream geneLOC100043132, LOC100043136, LOC668477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206F10.bB6Ng01-206F10.g
ACCGA025781GA025782
length9821,106
definitionB6Ng01-206F10.b B6Ng01-206F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,476,583 - 71,477,346)(71,608,609 - 71,609,722)
sequence
gaattcagagagttcattatacatcctgaatgtggtgtttttgtttaagc
ttttatcattgctataattttcttctgatatttagcatgtcttaacaatt
ccattaaaaagtcacaaggttcatctacactttggtttttttttattcaa
ttattttttcatagctaattggctttaagaaaattttgtctaactaaggt
catacaggggttctactagaaattttgtttttttacattcttacatttgt
gcccaaaaaacatttaatctccaggttgctgctttagcttctgccctgac
ttccctcagtgatggagagtgacctgagaactgtaatggaaaaataaacc
ttccccctcagggtgttgttggtcacagttatcacaatgatagactgcaa
actaagacaaggacctcagaggctgttagaaagtgctgcttccttagttt
tggggagactttgtgtagaagggatagtttttttcccttaaataatagta
aaagataccagccaaccattaagagtctagaatttgttggaagaaattcg
tttaatggttactgacgtcatcaagttcatcattgagctccaacagtttt
cagatttcaaggatgatattcatctcctgtaagtcgcccaattctctgac
ataaagcattttaccacgctctcttatcattttaacacctgtaaaattca
cagcagtggagtctctcactatcattcttagtattgataccttgccattc
tctctccttttctgatcagcctggattggaatcaatcaattttattgatc
ttcctcaccgaactatctttcagcttcattgatctttctgtttctttccc
atcccctgttgtattgattttactctggtccttattgctttcttttcttt
ctctttgactttagtcagctgatctttttctggtgttctaaggaagaaac
tcaggcccccagcttctattcttgtaaaagaa
gaattccacacaccttaacccaccatctccagacttccgctcttggctta
gactgtcctcccatgacccaaggaagtagagagtgaaagggaagctaagc
tacagagtaatgtacattgattagtgcaagcactaacccttgcttgtctt
ccatggatcctgttaagcatgagacacagaaaggagaatgtgaccctgtt
ctgctgtcgggactcagtctagggaggcagagatagtttagggggaaaaa
tcatgttttctttgtagaaccatcactgtggtccagagaagggatggagg
ggcttagttggttttgtcctgttattgtgacttaacttttttgtacagaa
gaaggaagggttttgtgtactgaaagggaaataatttggtgaggcagtag
tgttggacagaggggatggagttgacaagcccccattcttcctctgattt
catggaccatggccctcctcctactgaaaactagcctttctctagccttt
ctcccatcctcaacccccgtgagtggtgtggttcagcatatttctgtgtg
aactaattgttattttctggtatgtccagattttattaagtcttccggtc
agtgaaaatcggagtgagagtcgcaagcatgtggcatgaagtggcttttt
gcttacaccaagcagaaaaggatagtgctacacaaggaaaaagagaggaa
gagagacagagacacagagaccatcacacagagaaatagaactaacttcc
tcatttaatcaagtctaaacacagattatatgaggttgaaaaacagttac
ctttgttctggcaccggtgtcgcactcttgtctagggctataaaacccta
cgtgattttatcttttcataaacttttattgaatctgatgttcaagaggc
catggaggatcatcccatttaacctccccctctaatcctactcttaaacc
ccagcactaatgtgatgggagattaaaggcaataaatatgacaatgaggt
tgatctgcaggttgataggaatagagttggatagggatttggcaggggga
ccagcctgattgctgacagcatgagcctattggggaccttgtcatggtag
caaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_71476583_71477346
seq2: B6Ng01-206F10.b_44_807

seq1  GAATTCAGAGAGTTCATTATACATCCTGAATGTGGTGTTTTTGTTTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAGTTCATTATACATCCTGAATGTGGTGTTTTTGTTTAAGC  50

seq1  TTTTATCATTGCTATAATTTTCTTCTGATATTTAGCATGTCTTAACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCATTGCTATAATTTTCTTCTGATATTTAGCATGTCTTAACAATT  100

seq1  CCATTAAAAAGTCACAAGGTTCATCTACACTTTGGTTTTTTTTTATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAAAAGTCACAAGGTTCATCTACACTTTGGTTTTTTTTTATTCAA  150

seq1  TTATTTTTTCATAGCTAATTGGCTTTAAGAAAATTTTGTCTAACTAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTTCATAGCTAATTGGCTTTAAGAAAATTTTGTCTAACTAAGGT  200

seq1  CATACAGGGGTTCTACTAGAAATTTTGTTTTTTTACATTCTTACATTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGGGTTCTACTAGAAATTTTGTTTTTTTACATTCTTACATTTGT  250

seq1  GCCCAAAAAACATTTAATCTCCAGGTTGCTGCTTTAGCTTCTGCCCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAAAAACATTTAATCTCCAGGTTGCTGCTTTAGCTTCTGCCCTGAC  300

seq1  TTCCCTCAGTGATGGAGAGTGACCTGAGAACTGTAATGGAAAAATAAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAGTGATGGAGAGTGACCTGAGAACTGTAATGGAAAAATAAACC  350

seq1  TTCCCCCTCAGGGTGTTGTTGGTCACAGTTATCACAATGATAGACTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCAGGGTGTTGTTGGTCACAGTTATCACAATGATAGACTGCAA  400

seq1  ACTAAGACAAGGACCTCAGAGGCTGTTAGAAAGTGCTGCTTCCTTAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGACAAGGACCTCAGAGGCTGTTAGAAAGTGCTGCTTCCTTAGTTT  450

seq1  TGGGGAGACTTTGTGTAGAAGGGATAGTTTTTTTCCCTTAAATAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGACTTTGTGTAGAAGGGATAGTTTTTTTCCCTTAAATAATAGTA  500

seq1  AAAGATACCAGCCAACCATTAAGAGTCTAGAATTTGTTGGAAGAAATTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACCAGCCAACCATTAAGAGTCTAGAATTTGTTGGAAGAAATTCG  550

seq1  TTTAATGGTTACTGACGTCATCAAGTTCATCATTGAGCTCCAACAGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGGTTACTGACGTCATCAAGTTCATCATTGAGCTCCAACAGTTTT  600

seq1  CAGATTTCAAGGATGATATTCATCTCCTGTAAGTCGCCCAATTCTCTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCAAGGATGATATTCATCTCCTGTAAGTCGCCCAATTCTCTGAC  650

seq1  ATAAAGCATTTTACCACGCTCTCTTATCATTTTAACACCTGTAAAATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCATTTTACCACGCTCTCTTATCATTTTAACACCTGTAAAATTCA  700

seq1  CAGCAGTGGAGTCTCTCACTATCATTCTTAGTATTGATACCTTGCCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTGGAGTCTCTCACTATCATTCTTAGTATTGATACCTTGCCATTC  750

seq1  TCTCTCCTTTTCTG  764
      ||||||||||||||
seq2  TCTCTCCTTTTCTG  764

seq1: chr14_71608609_71609722
seq2: B6Ng01-206F10.g_68_1173 (reverse)

seq1  AATTTGCTACCATGACAAAGGTCCCCAATA-GCTCATGCTGTCCAGC-AT  48
      |||||||||||||||| ||||||||||||| ||||||||||| |||| ||
seq2  AATTTGCTACCATGAC-AAGGTCCCCAATAGGCTCATGCTGT-CAGCAAT  48

seq1  CAGGGCTTGGTTCTCCCTGCCAAATCCCTATCCAACTCTATTTCCTTTAT  98
      || ||||  | || |||||||||||||||||||||||||||| |   |||
seq2  CA-GGCT--GGTCCCCCTGCCAAATCCCTATCCAACTCTATTCC---TAT  92

seq1  CAACCTGCAGATCAACCCTCATTTGTCATATTTATTGCCTTTTAATCTCC  148
      ||||||||||||||| ||||| ||||||||||||||||| ||||||||||
seq2  CAACCTGCAGATCAA-CCTCA-TTGTCATATTTATTGCC-TTTAATCTCC  139

seq1  CATCCATTTAGTGCTGGGGTTTAAGAGTAGGATTAGAGGGGGGAGTTTAA  198
      ||||   |||||||||||||||||||||||||||||||||||  ||| ||
seq2  CATCACATTAGTGCTGGGGTTTAAGAGTAGGATTAGAGGGGGAGGTTAAA  189

seq1  TTGGATGATCCTCCATGGCCTCTTGAACATCAGATTCAATAAAAGTTTAT  248
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGATCCTCCATGGCCTCTTGAACATCAGATTCAATAAAAGTTTAT  239

seq1  GAAAAGATAAAATCACGTAGGGTTTTATAGCCCTAGACAAGAGTGCGACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATAAAATCACGTAGGGTTTTATAGCCCTAGACAAGAGTGCGACA  289

seq1  CCGGTGCCAGAAC-AAGGTAACTGTTTTTCAACCTCATATAATCTGTGTT  347
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCGGTGCCAGAACAAAGGTAACTGTTTTTCAACCTCATATAATCTGTGTT  339

seq1  TAGACTTGATTAAATGAGGAAGTTAGTTCTATTTCTCTGTGTGATGGTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTTGATTAAATGAGGAAGTTAGTTCTATTTCTCTGTGTGATGGTCT  389

seq1  CTGTGTCTCTGTCTCTCTTCCTCTCTTTTTCCTTGTGTAGCACTATCCTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTCTGTCTCTCTTCCTCTCTTTTTCCTTGTGTAGCACTATCCTT  439

seq1  TTCTGCTTGGTGTAAGCAAAAAGCCACTTCATGCCACATGCTTGCGACTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTGGTGTAAGCAAAAAGCCACTTCATGCCACATGCTTGCGACTC  489

seq1  TCACTCCGATTTTCACTGACCGGAAGACTTAATAAAATCTGGACATACCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCGATTTTCACTGACCGGAAGACTTAATAAAATCTGGACATACCA  539

seq1  GAAAATAACAATTAGTTCACACAGAAATATGCTGAACCACACCACTCACG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAACAATTAGTTCACACAGAAATATGCTGAACCACACCACTCACG  589

seq1  GGGGTTGAGGATGGGAGAAAGGCTAGAGAAAGGCTAGTTTTCAGTAGGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTGAGGATGGGAGAAAGGCTAGAGAAAGGCTAGTTTTCAGTAGGAG  639

seq1  GAGGGCCATGGTCCATGAAATCAGAGGAAGAATGGGGGCTTGTCAACTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCATGGTCCATGAAATCAGAGGAAGAATGGGGGCTTGTCAACTCC  689

seq1  ATCCCCTCTGTCCAACACTACTGCCTCACCAAATTATTTCCCTTTCAGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTCTGTCCAACACTACTGCCTCACCAAATTATTTCCCTTTCAGTA  739

seq1  CACAAAACCCTTCCTTCTTCTGTACAAAAAAGTTAAGTCACAATAACAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAACCCTTCCTTCTTCTGTACAAAAAAGTTAAGTCACAATAACAGG  789

seq1  ACAAAACCAACTAAGCCCCTCCATCCCTTCTCTGGACCACAGTGATGGTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACCAACTAAGCCCCTCCATCCCTTCTCTGGACCACAGTGATGGTT  839

seq1  CTACAAAGAAAACATGATTTTTCCCCCTAAACTATCTCTGCCTCCCTAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGAAAACATGATTTTTCCCCCTAAACTATCTCTGCCTCCCTAGA  889

seq1  CTGAGTCCCGACAGCAGAACAGGGTCACATTCTCCTTTCTGTGTCTCATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCCCGACAGCAGAACAGGGTCACATTCTCCTTTCTGTGTCTCATG  939

seq1  CTTAACAGGATCCATGGAAGACAAGCAAGGGTTAGTGCTTGCACTAATCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAGGATCCATGGAAGACAAGCAAGGGTTAGTGCTTGCACTAATCA  989

seq1  ATGTACATTACTCTGTAGCTTAGCTTCCCTTTCACTCTCTACTTCCTTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACATTACTCTGTAGCTTAGCTTCCCTTTCACTCTCTACTTCCTTGG  1039

seq1  GTCATGGGAGGACAGTCTAAGCCAAGAGCGGAAGTCTGGAGATGGTGGGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGGAGGACAGTCTAAGCCAAGAGCGGAAGTCTGGAGATGGTGGGT  1089

seq1  TAAGGTGTGTGGAATTC  1114
      |||||||||||||||||
seq2  TAAGGTGTGTGGAATTC  1106