BAC Information

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BAC

Clone NameB6Ng01-207N03
Chromosome14 (Build37)
Map Location 99,593,251 - 99,689,758
singlet/doubletdoublet
Overlap geneD14Ertd581e, LOC100043395
Upstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3
Downstream geneLOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207N03.bB6Ng01-207N03.g
ACCGA026866GA026867
length1,009708
definitionB6Ng01-207N03.b B6Ng01-207N03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,689,206 - 99,689,758)(99,593,251 - 99,593,958)
sequence
gaattcaccttctccagggtggtggcagcagttaagggtgaactgcagca
tccttcctcctcccctcctcttcctctccttcctcctcttcctctttctc
tccttcctcctcttcctcttcttcctcctcttccacctcctcctcaactt
cttcctcctctccctcctcccctcctcctcctcttcttcctcctctttct
ctttccttcctcctcctcttccacctcctcctcatcttcttcctcctctc
cctcctccccctcctcctcctcttcttcctcctctttctctttccttcct
cctcctcttccaccgcctcctcatcttcttcctcctccccctccaccccc
tccttctcctcttcttcctcctcttccacctcttcctcatcttcttcctc
ctctccctcctcccctcctcctcctcttcttcctcctccttctctttcct
tcctcctcctcttccacttcctcctcatcttcttcctcctctccctcctc
cccctcctcctcatcttctccctcctcttctgctttctcctctccttttt
ccttttggttttctcttcacaaggtttctctgtgtagccgaggccatcct
agaactcttctgtagaccaagctggcctggacctcaaagatccaccttcc
ttagcctcctgggtgctgggattaaaggctcaagccaccatggccctgta
ggcactttcttttcctgccccactttgtcataaaatttttcatgggtgct
acagtagcagcataggcagaaaaacccagctggagtatcttattataggg
acagaaaatggactaacacagcacaccaaatgtagcagacacaaattaca
aaggcaccatgctgagaccctcttaggattgatggattccagtaacaggg
gaaagaagctgatttacagaatccccatatagattagagtattacttata
atagaaaatgacatcatactctgaaaactcctgacagaaaatactttaca
ggatcagaa
gaattcatttataagaagaaagttgtttagaggttctctaaactggagtg
gagggttaagaggcatttaataaagaatggaaaaagacaaaggatggctg
ttcttgggggtggtagaaatggtctcaagttctgaggttctgagagctgc
acaactctacactttaacttggtgtttattgtgctacttgcatattatta
tatattttagtacataattttttagagaattgttgtcaataaatgaagac
tacttcgttgtcatctgtaatgtcaactacttggcagataccatgccaga
ccaatgaatattagatataggcatactgttgagatcactctataaacatt
tatgaaaacttgtatgttttactttgaatgaacagtccgcaggcattaat
gtgttagatgatatttagcagagtcttacatgaattcttcattttgttct
gtacagttatttggttgaaaaaaattttttttgttttgttttttttgttt
ttcgagacagggtttctctgtttaacaatggctgtcctggaactcactct
gtagaccaggctggcctcgaactcagaaatccacctgcctctgcctccca
agtgctgggattaaaggcatacgccactgctgcccggctatttggtgaaa
attttaaaaacaaacaaacaaacaaaaaaaaaacctcttgttggactctg
ccatagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99689206_99689758
seq2: B6Ng01-207N03.b_46_598 (reverse)

seq1  AGGAAAAAGGAGAGGAGAAAGCAGAAGAGGAGGGAGAAGATGAGGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGGAGAGGAGAAAGCAGAAGAGGAGGGAGAAGATGAGGAGGAG  50

seq1  GGGGAGGAGGGAGAGGAGGAAGAAGATGAGGAGGAAGTGGAAGAGGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGAGGGAGAGGAGGAAGAAGATGAGGAGGAAGTGGAAGAGGAGGA  100

seq1  GGAAGGAAAGAGAAGGAGGAGGAAGAAGAGGAGGAGGAGGGGAGGAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAAGAGAAGGAGGAGGAAGAAGAGGAGGAGGAGGGGAGGAGGGA  150

seq1  GAGGAGGAAGAAGATGAGGAAGAGGTGGAAGAGGAGGAAGAAGAGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGAAGAAGATGAGGAAGAGGTGGAAGAGGAGGAAGAAGAGGAGAA  200

seq1  GGAGGGGGAGGAGGGGGAGGAGGAAGAAGATGAGGAGGCGGTGGAAGAGG  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGGTGGAGGGGGAGGAGGAAGAAGATGAGGAGGCGGTGGAAGAGG  250

seq1  AGGAGGAAGGAAAGAGAAAGAGGAGGAAGAAGAGGAGGAGGAGGGGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAGGAAAGAGAAAGAGGAGGAAGAAGAGGAGGAGGAGGGGGAGG  300

seq1  AGGGAGAGGAGGAAGAAGATGAGGAGGAGGTGGAAGAGGAGGAGGAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGGAGGAAGAAGATGAGGAGGAGGTGGAAGAGGAGGAGGAAGGA  350

seq1  AAGAGAAAGAGGAGGAAGAAGAGGAGGAGGAGGGGAGGAGGGAGAGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAGAGGAGGAAGAAGAGGAGGAGGAGGGGAGGAGGGAGAGGAGG  400

seq1  AAGAAGTTGAGGAGGAGGTGGAAGAGGAGGAAGAAGAGGAAGAGGAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTGAGGAGGAGGTGGAAGAGGAGGAAGAAGAGGAAGAGGAGGAA  450

seq1  GGAGAGAAAGAGGAAGAGGAGGAAGGAGAGGAAGAGGAGGGGAGGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAAAGAGGAAGAGGAGGAAGGAGAGGAAGAGGAGGGGAGGAGGAA  500

seq1  GGATGCTGCAGTTCACCCTTAACTGCTGCCACCACCCTGGAGAAGGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGCAGTTCACCCTTAACTGCTGCCACCACCCTGGAGAAGGTGAA  550

seq1  TTC  553
      |||
seq2  TTC  553

seq1: chr14_99593251_99593958
seq2: B6Ng01-207N03.g_65_772

seq1  GAATTCATTTATAAGAAGAAAGTTGTTTAGAGGTTCTCTAAACTGGAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATAAGAAGAAAGTTGTTTAGAGGTTCTCTAAACTGGAGTG  50

seq1  GAGGGTTAAGAGGCATTTAATAAAGAATGGAAAAAGACAAAGGATGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTAAGAGGCATTTAATAAAGAATGGAAAAAGACAAAGGATGGCTG  100

seq1  TTCTTGGGGGTGGTAGAAATGGTCTCAAGTTCTGAGGTTCTGAGAGCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGGGGTGGTAGAAATGGTCTCAAGTTCTGAGGTTCTGAGAGCTGC  150

seq1  ACAACTCTACACTTTAACTTGGTGTTTATTGTGCTACTTGCATATTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTACACTTTAACTTGGTGTTTATTGTGCTACTTGCATATTATTA  200

seq1  TATATTTTAGTACATAATTTTTTAGAGAATTGTTGTCAATAAATGAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTAGTACATAATTTTTTAGAGAATTGTTGTCAATAAATGAAGAC  250

seq1  TACTTCGTTGTCATCTGTAATGTCAACTACTTGGCAGATACCATGCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCGTTGTCATCTGTAATGTCAACTACTTGGCAGATACCATGCCAGA  300

seq1  CCAATGAATATTAGATATAGGCATACTGTTGAGATCACTCTATAAACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAATATTAGATATAGGCATACTGTTGAGATCACTCTATAAACATT  350

seq1  TATGAAAACTTGTATGTTTTACTTTGAATGAACAGTCCGCAGGCATTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAACTTGTATGTTTTACTTTGAATGAACAGTCCGCAGGCATTAAT  400

seq1  GTGTTAGATGATATTTAGCAGAGTCTTACATGAATTCTTCATTTTGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGATGATATTTAGCAGAGTCTTACATGAATTCTTCATTTTGTTCT  450

seq1  GTACAGTTATTTGGTTGAAAAAAATTTTTTTTGTTTTGTTTTTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTTATTTGGTTGAAAAAAATTTTTTTTGTTTTGTTTTTTTTGTTT  500

seq1  TTCGAGACAGGGTTTCTCTGTTTAACAATGGCTGTCCTGGAACTCACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGACAGGGTTTCTCTGTTTAACAATGGCTGTCCTGGAACTCACTCT  550

seq1  GTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCA  600

seq1  AGTGCTGGGATTAAAGGCATACGCCACTGCTGCCCGGCTATTTGGTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGGATTAAAGGCATACGCCACTGCTGCCCGGCTATTTGGTGAAA  650

seq1  ATTTTAAAAACAAACAAACAAACAAAAAAAAAACCTCTTGTTGGACTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAACAAACAAACAAACAAAAAAAAAACCTCTTGTTGGACTCTG  700

seq1  CCATAGTG  708
      ||||||||
seq2  CCATAGTG  708