BAC Information

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BAC

Clone NameB6Ng01-207P24
Chromosome14 (Build37)
Map Location 24,216,411 - 24,348,604
singlet/doubletdoublet
Overlap geneKcnma1
Upstream gene1700112E06Rik, EG435392, LOC665068
Downstream geneLOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a, Rps24
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207P24.bB6Ng01-207P24.g
ACCGA026997GA026998
length760387
definitionB6Ng01-207P24.b B6Ng01-207P24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,216,411 - 24,217,163)(24,348,212 - 24,348,604)
sequence
gaattctgtaggggacagtttttttttgtttgtttgttttgttttgtttt
gttttgttttttgttttgttttgttttgttttttttcagccagaaattta
cccacaaaaccatggatttctaactacatttaaaaatcttgcaggaaacc
aggtattcattctaggaaagtctgttgtctcacaggatatgggttccgca
actggacaaatcccccactgctgtatatagtccctggcttcacaaggcag
gcagtcctcattagcctttgtttaagcacaatactcccaagatagggcaa
attcttatggcatgctatgtctccaattgtcagttgatactgtgtggcaa
ggagggtaggagctatgtaccaggattggaaagcaccctactggcttcaa
acctacacattggaggcttacaaaattccaattggctttcctatgtaatg
tgaacagtccaagtacttaggtcctagtgatattctgaaaatggatggaa
actgtaaaaagtgcattgatgagtccccttgttacactcttgctaaactt
tctccacaactgtttttcttgacttgaggaataatttggaagtctgttat
gggatcctccacattgcctgtctattgtccttttaatggctcagcactct
atttaaattggctcctattcctctttctgcctcccgtaaggcaactgatc
cttttgttccaactgggagaatgagtttgggtgtcctgcaccaccctcat
cctttgcatt
cagtccttctgcaagaacaatggttcctaaccattgagccacgtctccag
tccctgtgtaactagtcaaccttcaccttttatcattcagttccttctga
agccaattgccagttctgggctcaggttccccaaatcctgctgtagcccc
cactctttgctccctgctgggcttcagccaagctcacagaactgagcatc
tgcgcagacctcaggaactctgcagcacaagcagaaactattggctcaag
ggccattttgaagacgtctgcagccatttctctgatggtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgcatgtatccgcaatttccaagagg
gcacttcacttgtaaaagaagaaatttccatacctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_24216411_24217163
seq2: B6Ng01-207P24.b_31_790

seq1  GAATTCTGTAGGGGACAGTTTTTTTTTGTTTGTTTGTTTTGTTTTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAGGGGACAGTTTTTTTTTGTTTGTTTGTTTTGTTTTGTTTT  50

seq1  GTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTCAGCCAGAAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTTGTTTTGTTTTGTTTTGTTTTTTTTCAGCCAGAAATTTA  100

seq1  CCCACAAAACCATGGATTTCTAACTACATTTAAAAATCTTGCAGGAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAAAACCATGGATTTCTAACTACATTTAAAAATCTTGCAGGAAACC  150

seq1  AGGTATTCATTCTAGGAAAGTCTGTTGTCTCACAGGATATGGGTTCCGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTCATTCTAGGAAAGTCTGTTGTCTCACAGGATATGGGTTCCGCA  200

seq1  ACTGGACAAATCCCCCACTGCTGTATATAGTCCCTGGCTTCACAAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGACAAATCCCCCACTGCTGTATATAGTCCCTGGCTTCACAAGGCAG  250

seq1  GCAGTCCTCATTAGCCTTTGTTTAAGCACAATACTCCCAAGATAGGGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCTCATTAGCCTTTGTTTAAGCACAATACTCCCAAGATAGGGCAA  300

seq1  ATTCTTATGGCATGCTATGTCTCCAATTGTCAGTTGATACTGTGTGGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATGGCATGCTATGTCTCCAATTGTCAGTTGATACTGTGTGGCAA  350

seq1  GGAGGGTAGGAGCTATGTACCAGGATTGGAAAGCACCCTACTGGCTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGTAGGAGCTATGTACCAGGATTGGAAAGCACCCTACTGGCTTCAA  400

seq1  ACCTACACATTGGAGGCTTACAAAATTCCAATTGGCTTTCCTATGTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACACATTGGAGGCTTACAAAATTCCAATTGGCTTTCCTATGTAATG  450

seq1  TGAACAGTCCAAGTACTTAGGTCCTAGTGATATTCTGAAAATGGATGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGTCCAAGTACTTAGGTCCTAGTGATATTCTGAAAATGGATGGAA  500

seq1  ACTGTAAAAAGTGCATTGATGAGTCCCCTTGTTACACTCTTGCTAAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAAAGTGCATTGATGAGTCCCCTTGTTACACTCTTGCTAAACTT  550

seq1  TCTCCACAACTG-TTTTCTTGACTTGAGGAATAATTTGGAAGTCTGTTAT  599
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTCCACAACTGTTTTTCTTGACTTGAGGAATAATTTGGAAGTCTGTTAT  600

seq1  GGGATCCTCCACATTGCCTGTCTATTGTCC-TTTAATGGCTCAGCACTCT  648
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGATCCTCCACATTGCCTGTCTATTGTCCTTTTAATGGCTCAGCACTCT  650

seq1  ATTTAAATTGGCTCCTATT-CTCTTTCTGCCTCCCGT-AGGCAACTGATC  696
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  ATTTAAATTGGCTCCTATTCCTCTTTCTGCCTCCCGTAAGGCAACTGATC  700

seq1  CTTT--GTCCAACTGGGAGAATGAGTTT-GGTGTCCTGTACCACCCTCAT  743
      ||||   ||||||||||||||||||||| ||||||||| |||||||||||
seq2  CTTTTGTTCCAACTGGGAGAATGAGTTTGGGTGTCCTGCACCACCCTCAT  750

seq1  CCTTTGCATT  753
      ||||||||||
seq2  CCTTTGCATT  760

seq1: chr14_24348212_24348604
seq2: B6Ng01-207P24.g_63_455 (reverse)

seq1  CGAGGTTTGGAAATTTCCTCCGAAACAAGAGAAGTGACCTCTTGGAAACT  50
      |||||| |||||||||| ||    ||||| |||||| ||||||||||| |
seq2  CGAGGTATGGAAATTTCTTCTTTTACAAGTGAAGTGCCCTCTTGGAAATT  50

seq1  GCAGACACATGCACACACACACACACACACACACACACACACACACACAC  100
      || || ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATACATGCACACACACACACACACACACACACACACACACACACAC  100

seq1  CATCAGAGAAATGGCTGCAGACGTCTTCAAAATGGCCCTTGAGCCAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGAAATGGCTGCAGACGTCTTCAAAATGGCCCTTGAGCCAATAG  150

seq1  TTTCTGCTTGTGCTGCAGAGTTCCTGAGGTCTGCGCAGATGCTCAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTGTGCTGCAGAGTTCCTGAGGTCTGCGCAGATGCTCAGTTCT  200

seq1  GTGAGCTTGGCTGAAGCCCAGCAGGGAGCAAAGAGTGGGGGCTACAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTTGGCTGAAGCCCAGCAGGGAGCAAAGAGTGGGGGCTACAGCAG  250

seq1  GATTTGGGGAACCTGAGCCCAGAACTGGCAATTGGCTTCAGAAGGAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGGGAACCTGAGCCCAGAACTGGCAATTGGCTTCAGAAGGAACTG  300

seq1  AATGATAAAAGGTGAAGGTTGACTAGTTACACAGGGACTGGAGACGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAAAAGGTGAAGGTTGACTAGTTACACAGGGACTGGAGACGTGGC  350

seq1  TCAATGGTTAGGAACCATTGTTCTTGCAGAAGGACTGGAATTC  393
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTTAGGAACCATTGTTCTTGCAGAAGGACTGGAATTC  393