BAC Information

Click to search

BAC

Clone NameB6Ng01-209E07
Chromosome14 (Build37)
Map Location 91,544,328 - 91,545,414
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043336
Downstream geneEG639558, EG665377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209E07.bB6Ng01-209E07.g
ACCGA027929GA027930
length1,0821,186
definitionB6Ng01-209E07.b B6Ng01-209E07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgagagtccaatcagcagaccaacaaatcaatgaatgaacaaa
tgagaacaaacacatcacatgaattcataaattaaaaacaagcttgtcct
tcccacctcctctcctgccctcttctgtgagccagtattaaaaccgttgt
cttactattctattatagaacatcttcttttcttcagccttttgcagcac
cacttaaaaaaaaaagacccagccaagatcaataaaaacacccgctggag
cctttctaggtccagaatatggtgctttatcaggaaacttatacattgta
ttaatggtgctgccaagaaactagagcttcaaacctcagttagacaaaaa
atgtcggtgtgtttgtgtacttggaatgtttgtgtatatatcacagccta
taattttctacagcatggcacatgatagaagcaattaattctgcctgatt
atgtaataaaacaacagcaattcaatgaggcatctctttcattgtgtgca
tataaaaaaatcagaaaatatgaaaagaaagttgtagaagttatcagcat
gttttatatatctgtttgtacatgtattatacacatgcaaacacaaacac
acacacacacatatatatgtgtgtgtgtgtatatatacatatatgcatga
gttttcattcagatgtatgtgatatatatatgtatatatatactacagtt
atagaaatgctgaatataattgacattcagaaaaatatttatcagatatt
ataacagacataagtgtttatttgaataaatagagtagactgagtatagg
atacattttaatattttagaggtgtattcacattacattttttaaaaata
ataagcaaaaacttagagttaaggcataaacaattttctgtgtacattaa
taatgttctatcaaaataaagtgtatttgacatgagcatattataaatat
gtacctatatcacttaacagaaatacccaataatagaaacacacctttat
ttagtcatttacaagcaatcacattcacaccacactgtacttcataaaag
tcagtaatttgcttccacattttgaatctggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaacaactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtacacactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccaa
tgaaggacctagagaaagtaccaaagagctaaagggatctgcaccctata
gtgaacaacattatgaactacctagtaccccggagctctgactctagctg
catatgcatcaaagaatgcctagtcgcatcacttgaaagagaggcccatg
acacgcaactttatatgccagtacaggaacgctggtcataatggcaattg
ggtgtgatacgtagcgggtaactgcgtgatactact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_91544328_91545414
seq2: B6Ng01-209E07.b_46_1127 (reverse)

seq1  CCCAGA-TCAAAATGT-GAAGCAAATTACTGACTTTTATGAAGTACAGTT  48
      |||||| ||||||||| |||||||||||||||||||||||||||||||| 
seq2  CCCAGATTCAAAATGTGGAAGCAAATTACTGACTTTTATGAAGTACAGTG  50

seq1  GTGTGTGAATTGTGATTTGCTTGTAAAATGAACTAAATAAAGGTGTGTTT  98
        ||||||| ||||| |||||||| ||||| |||||||||||||||||||
seq2  TGGTGTGAA-TGTGA-TTGCTTGT-AAATG-ACTAAATAAAGGTGTGTTT  96

seq1  CTATTTATTGGGTATTTCTGTTAAGTGATATAGGTACATATTTTATAATA  148
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTA-TTATTGGGTATTTCTGTTAAGTGATATAGGTACATA-TTTATAATA  144

seq1  TGCTCATGTCAAATACACTTTATTTTGATAGAAACATTATTAATGTACAC  198
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGCTCATGTCAAATACACTTTATTTTGATAG-AACATTATTAATGTACAC  193

seq1  AGAAAATTGTTTATGCCTTAACTCTAAGTTTTTGCTTATTATTTTTAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTGTTTATGCCTTAACTCTAAGTTTTTGCTTATTATTTTTAAAA  243

seq1  AATGTAATGTGAATACACCTCTAAAATATTAAAATGTATCCTATACTCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATGTGAATACACCTCTAAAATATTAAAATGTATCCTATACTCAG  293

seq1  TCTACTCTATTTATTCAAATAAACACTTATGTCTGTTATAATATCTGATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCTATTTATTCAAATAAACACTTATGTCTGTTATAATATCTGATA  343

seq1  AATATTTTTCTGAATGTCAATTATATTCAGCATTTCTATAACTGTAGTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTTCTGAATGTCAATTATATTCAGCATTTCTATAACTGTAGTAT  393

seq1  ATATATACATATATATATCACATACATCTGAATGAAAACTCATGCATATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACATATATATATCACATACATCTGAATGAAAACTCATGCATATA  443

seq1  TGTATATATACACACACACACATATATATGTGTGTGTGTGTGTTTGTGTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATACACACACACACATATATATGTGTGTGTGTGTGTTTGTGTT  493

seq1  TGCATGTGTATAATACATGTACAAACAGATATATAAAACATGCTGATAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTATAATACATGTACAAACAGATATATAAAACATGCTGATAAC  543

seq1  TTCTACAACTTTCTTTTCATATTTTCTGATTTTTTTATATGCACACAATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAACTTTCTTTTCATATTTTCTGATTTTTTTATATGCACACAATG  593

seq1  AAAGAGATGCCTCATTGAATTGCTGTTGTTTTATTACATAATCAGGCAGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATGCCTCATTGAATTGCTGTTGTTTTATTACATAATCAGGCAGA  643

seq1  ATTAATTGCTTCTATCATGTGCCATGCTGTAGAAAATTATAGGCTGTGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTGCTTCTATCATGTGCCATGCTGTAGAAAATTATAGGCTGTGAT  693

seq1  ATATACACAAACATTCCAAGTACACAAACACACCGACATTTTTTGTCTAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACACAAACATTCCAAGTACACAAACACACCGACATTTTTTGTCTAA  743

seq1  CTGAGGTTTGAAGCTCTAGTTTCTTGGCAGCACCATTAATACAATGTATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTTGAAGCTCTAGTTTCTTGGCAGCACCATTAATACAATGTATA  793

seq1  AGTTTCCTGATAAAGCACCATATTCTGGACCTAGAAAGGCTCCAGCGGGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTGATAAAGCACCATATTCTGGACCTAGAAAGGCTCCAGCGGGT  843

seq1  GTTTTTATTGATCTTGGCTGGGTCTTTTTTTTTTAAGTGGTGCTGCAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTGATCTTGGCTGGGTCTTTTTTTTTTAAGTGGTGCTGCAAAA  893

seq1  GGCTGAAGAAAAGAAGATGTTCTATAATAGAATAGTAAGACAACGGTTTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGAAAAGAAGATGTTCTATAATAGAATAGTAAGACAACGGTTTT  943

seq1  AATACTGGCTCACAGAAGAGGGCAGGAGAGGAGGTGGGAAGGACAAGCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTGGCTCACAGAAGAGGGCAGGAGAGGAGGTGGGAAGGACAAGCTT  993

seq1  GTTTTTAATTTATGAATTCATGTGATGTGTTTGTTCTCATTTGTTCATTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAATTTATGAATTCATGTGATGTGTTTGTTCTCATTTGTTCATTC  1043

seq1  ATTGATTTGTTGGTCTGCTGATTGGACTCTCATGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTGTTGGTCTGCTGATTGGACTCTCATGAATTC  1082