BAC Information

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BAC

Clone NameB6Ng01-209H22
Chromosome14 (Build37)
Map Location 28,324,089 - 28,414,216
singlet/doubletdoublet
Overlap geneLOC665370
Upstream geneSlmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66
Downstream geneErc2, LOC100040206, Wnt5a, LOC100040218
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209H22.bB6Ng01-209H22.g
ACCGA028096GA028097
length1,106697
definitionB6Ng01-209H22.b B6Ng01-209H22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,413,118 - 28,414,216)(28,324,089 - 28,324,785)
sequence
gaattctcaaatgcacagattcttattcttgaataggtttattattctga
acacctgtaccaaacttccctgcccctgctcagactcctggctattccat
tgactttctgtaaagtaaattgaaccctgtccacccctcagtattcatat
ggtaaagctctgggcctgatatgtctgtgtttggagacaaaacctttaaa
aaggtaattcaaactaagaagaaacctaaatccaactgaatggtatctta
gaggaaaagttgtcggcccctggtttcaccactatacttcctggcatcca
gaagaccaaggcaggagaacctggaaatagaagccagtctgggatgcaga
tagagaaagaggctgacaaaaaagccaaataaggacatagcaagaagcca
gccatctgcaaatcaaggagaggcctcaaaagaaaccaagtctgcctgta
cttagctcttggaattccagcctccaaagttaagagagaatgaatccttg
ttgttcaaaacacctgatctttggtattttcttctaggtactcaaattat
tatgatacctccttttaagttttaaaacttctcctaagctagcctcttca
gtgtttaattctattctattctattctattctatttttttgtgacaggct
attgctatgtagcccaggctatcctcacactcgtgactcacttgattctg
ccccccaacactgggattatcagcatacaccacccatgtcctgcctttat
ttttaatcttcatactagattcagttattttctaacttaatagacctgtc
acatattgcttcattaatgtatcttatttcccaaatcacatcaataaccc
ctgtgttatggcttaaatctggaatgtccctgaagagtcacaaaaaaagt
tgggtccccagggtgtcactactggggatgagaaggaaagaggcaggcct
aaatgagaatttgccactattgtttaagtaaccaaacacagcatcaattt
gccttctaaatgtatacatttgtattccataagacaaaaagctactctca
gctaatcagaggaagccctttcttttcagtggagtggtagagagtgtaga
aggcta
gaattccaggtcagcaagagctacataaaaagcctatgtgttatatataa
aataaataaataaataaaagggctagagtcggcaggttaatagacatttt
ctgggaggtagagtagtgtgaatttgaaagtcttacctttttctttgagt
tagtgtggcatgtatacatgcaaggtgtgagttctcatgtgtgctcgagt
gggtgcacacacacatgtgcgaggccacaggtggatggagactggggttt
tcttccctatttctctccctttgtatattgaaggctttctcacgtggagc
ccagagtttgctaactcagctggtttatctagccagctcgccctacccca
tctctgctgtgggggtctcagcaaataccagggccagcaaaatgtctgtt
tgcaggaggcaaggcaaaagctcagttcaactcaactcagtagccagtgt
tggttccagttttgacagcctggctccgagtggcttttttcaggcatatt
taaagccagcacaatgtggaaaacttttttctggtgataaataactcaac
gcagtatgtacaacaaaacttgacaagatttcatctaaactcttgtaaag
tgcacgtaacatcctccatatggataggttctattgattaactaaggaag
caggctcaagggaaacagcactcatagggacctggggggggggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_28413118_28414216
seq2: B6Ng01-209H22.b_50_1155 (reverse)

seq1  TAGCC-TCTACACTCTCTACCACT-CACTGAAAAGAAA-GGCTT-CTCTG  46
      ||||| |||||||||||||||||| ||||||||||||| ||||| |||||
seq2  TAGCCTTCTACACTCTCTACCACTCCACTGAAAAGAAAGGGCTTCCTCTG  50

seq1  ATTAAGGCTGAGAGTAGC-TTTTGTC-TATGG-ATACAAATGTATACATT  93
      ||||  |||||||||||| ||||||| ||||| |||||||||||||||||
seq2  ATTA--GCTGAGAGTAGCTTTTTGTCTTATGGAATACAAATGTATACATT  98

seq1  TAGAAGGCAAATTGATGCTGTGTTTGGTTACTTAAACAATAGTGGCAAAT  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGGCAAATTGATGCTGTGTTTGGTTACTTAAACAATAGTGGCAAAT  148

seq1  TCTCATTTAGGCCTGCCTCTTTCCTTCTCAT-CCCAGTAGTGACACCCTG  192
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTCATTTAGGCCTGCCTCTTTCCTTCTCATCCCCAGTAGTGACACCCTG  198

seq1  GGGACCAAAC-TTTTTTGTGACTCTTCAGGGACATTCCAGATTTAAGCCA  241
      |||||| ||| |||||||||||||||||||||||||||||||||||||||
seq2  GGGACCCAACTTTTTTTGTGACTCTTCAGGGACATTCCAGATTTAAGCCA  248

seq1  TAACACAGGGGTTATTGATGTGATTTGGGAAATAAGATACATTAATGAAG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAGGGGTTATTGATGTGATTTGGGAAATAAGATACATTAATGAAG  298

seq1  CAATATGTGACAGGTCTATTAAGTTAGAAAATAACTGAATCTAGTATGAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTGACAGGTCTATTAAGTTAGAAAATAACTGAATCTAGTATGAA  348

seq1  GATTAAAAATAAAGGCAGGACATGGGTGGTGTATGCTGATAATCCCAGTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAAATAAAGGCAGGACATGGGTGGTGTATGCTGATAATCCCAGTG  398

seq1  TTGGGGGGCAGAATCAAGTGAGTCACGAGTGTGAGGATAGCCTGGGCTAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGGCAGAATCAAGTGAGTCACGAGTGTGAGGATAGCCTGGGCTAC  448

seq1  ATAGCAATAGCCTGTCACAAAAAAATAGAATAGAATAGAATAGAATAGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATAGCCTGTCACAAAAAAATAGAATAGAATAGAATAGAATAGAA  498

seq1  TTAAACACTGAAGAGGCTAGCTTAGGAGAAGTTTTAAAACTTAAAAGGAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACTGAAGAGGCTAGCTTAGGAGAAGTTTTAAAACTTAAAAGGAG  548

seq1  GTATCATAATAATTTGAGTACCTAGAAGAAAATACCAAAGATCAGGTGTT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATAATAATTTGAGTACCTAGAAGAAAATACCAAAGATCAGGTGTT  598

seq1  TTGAACAACAAGGATTCATTCTCTCTTAACTTTGGAGGCTGGAATTCCAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAACAAGGATTCATTCTCTCTTAACTTTGGAGGCTGGAATTCCAA  648

seq1  GAGCTAAGTACAGGCAGACTTGGTTTCTTTTGAGGCCTCTCCTTGATTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGTACAGGCAGACTTGGTTTCTTTTGAGGCCTCTCCTTGATTTG  698

seq1  CAGATGGCTGGCTTCTTGCTATGTCCTTATTTGGCTTTTTTGTCAGCCTC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGCTGGCTTCTTGCTATGTCCTTATTTGGCTTTTTTGTCAGCCTC  748

seq1  TTTCTCTATCTGCATCCCAGACTGGCTTCTATTTCCAGGTTCTCCTGCCT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTATCTGCATCCCAGACTGGCTTCTATTTCCAGGTTCTCCTGCCT  798

seq1  TGGTCTTCTGGATGCCAGGAAGTATAGTGGTGAAACCAGGGGCCGACAAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTCTGGATGCCAGGAAGTATAGTGGTGAAACCAGGGGCCGACAAC  848

seq1  TTTTCCTCTAAGATACCATTCAGTTGGATTTAGGTTTCTTCTTAGTTTGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCTAAGATACCATTCAGTTGGATTTAGGTTTCTTCTTAGTTTGA  898

seq1  ATTACCTTTTTAAAGGTTTTGTCTCCAAACACAGACATATCAGGCCCAGA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTTTTTAAAGGTTTTGTCTCCAAACACAGACATATCAGGCCCAGA  948

seq1  GCTTTACCATATGAATACTGAGGGGTGGACAGGGTTCAATTTACTTTACA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACCATATGAATACTGAGGGGTGGACAGGGTTCAATTTACTTTACA  998

seq1  GAAAGTCAATGGAATAGCCAGGAGTCTGAGCAGGGGCAGGGAAGTTTGGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCAATGGAATAGCCAGGAGTCTGAGCAGGGGCAGGGAAGTTTGGT  1048

seq1  ACAGGTGTTCAGAATAATAAACCTATTCAAGAATAAGAATCTGTGCATTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGTTCAGAATAATAAACCTATTCAAGAATAAGAATCTGTGCATTT  1098

seq1  GAGAATTC  1099
      ||||||||
seq2  GAGAATTC  1106

seq1: chr14_28324089_28324785
seq2: B6Ng01-209H22.g_67_763

seq1  GAATTCCAGGTCAGCAAGAGCTACATAAAAAGCCTATGTGTTATATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCAGCAAGAGCTACATAAAAAGCCTATGTGTTATATATAA  50

seq1  AATAAATAAATAAATAAAAGGGCTAGAGTCGGCAGGTTAATAGACATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATAAATAAAAGGGCTAGAGTCGGCAGGTTAATAGACATTTT  100

seq1  CTGGGAGGTAGAGTAGTGTGAATTTGAAAGTCTTACCTTTTTCTTTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGTAGAGTAGTGTGAATTTGAAAGTCTTACCTTTTTCTTTGAGT  150

seq1  TAGTGTGGCATGTATACATGCAAGGTGTGAGTTCTCATGTGTGCTCGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGGCATGTATACATGCAAGGTGTGAGTTCTCATGTGTGCTCGAGT  200

seq1  GGGTGCACACACACATGTGCGAGGCCACAGGTGGATGGAGACTGGGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCACACACACATGTGCGAGGCCACAGGTGGATGGAGACTGGGGTTT  250

seq1  TCTTCCCTATTTCTCTCCCTTTGTATATTGAAGGCTTTCTCACGTGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTATTTCTCTCCCTTTGTATATTGAAGGCTTTCTCACGTGGAGC  300

seq1  CCAGAGTTTGCTAACTCAGCTGGTTTATCTAGCCAGCTCGCCCTACCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTGCTAACTCAGCTGGTTTATCTAGCCAGCTCGCCCTACCCCA  350

seq1  TCTCTGCTGTGGGGGTCTCAGCAAATACCAGGGCCAGCAAAATGTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTGTGGGGGTCTCAGCAAATACCAGGGCCAGCAAAATGTCTGTT  400

seq1  TGCAGGAGGCAAGGCAAAAGCTCAGTTCAACTCAACTCAGTAGCCAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGGCAAGGCAAAAGCTCAGTTCAACTCAACTCAGTAGCCAGTGT  450

seq1  TGGTTCCAGTTTTGACAGCCTGGCTCCGAGTGGCTTTTTTCAGGCATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCAGTTTTGACAGCCTGGCTCCGAGTGGCTTTTTTCAGGCATATT  500

seq1  TAAAGCCAGCACAATGTGGAAAACTTTTTTCTGGTGATAAATAACTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAGCACAATGTGGAAAACTTTTTTCTGGTGATAAATAACTCAAC  550

seq1  GCAGTATGTACAACAAAACTTGACAAGATTTCATCTAAACTCTTGTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTATGTACAACAAAACTTGACAAGATTTCATCTAAACTCTTGTAAAG  600

seq1  TGCACGTAACATCCTCCATATGGATAGGTTCTATTGATTAACTAAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGTAACATCCTCCATATGGATAGGTTCTATTGATTAACTAAGGAAG  650

seq1  CAGGCTCAAGGGAAACAGCACTCATAGGGACCTGGGGGGGGGGGGAG  697
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCAAGGGAAACAGCACTCATAGGGACCTGGGGGGGGGGGGAG  697