BAC Information

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BAC

Clone NameB6Ng01-209I24
Chromosome14 (Build37)
Map Location 79,830,945 - 79,983,142
singlet/doubletdoublet
Overlap geneEG432879, Wbp4, Elf1, LOC668560
Upstream geneLOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7
Downstream geneSugt1, Lect1, Pcdh8, EG629734, Olfm4, LOC672828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209I24.bB6Ng01-209I24.g
ACCGA028147GA028148
length7941,123
definitionB6Ng01-209I24.b B6Ng01-209I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,830,945 - 79,831,738)(79,982,024 - 79,983,142)
sequence
gaattctcccctgttgactttgccaattaatcagcaagtgctgtcatttc
catttataagatttagaaatacatctacttttctgtttatgtacctatag
tttgaaattctcaggacctaaattacttgaaatgctagttaagtggaagc
taggcatggtagtagagcacttctttttaaagatatatttatttattttt
acgtatatgagtacactgcagctgtacagatggttgttgggaattgtact
taggacctctgctagctcaaggcaactctgcttcctcagtccctgctcgc
tccagcccaaagactgatttattattgtatgtgagtacactgtagctgtc
ttcagacacacctgaagaggacatcagatctcattacaggtggttgtgat
ccaccatgtgattgctgggatttgaactcaggacctttggaagagcagtc
agtgttcttaccgactgagccatctcgccagctcagtagagcccttaccc
cagcactgcagaggctaaggcaggagggttgccagtttctcaggctagcc
tgagctacaagtgagaccctgcctcaaccaaaaatagggcaaaataaagt
atcattgttgttttcaaaatgataggagacttagcaaataactttttttt
tgttttgttttttcgagacagggtttctctgtatagccctggctgtcctg
gaacttactctgtagaccaggctggcctcgaactcagaaatctgcctgcc
tctgcctcccgagtgctgggattaaaggcgttcgccaccaccac
gaattcaaagccacccagaggtgcacagtgagagagactttgtatcaaca
caaatgcacatgcacacatactcacaaatgggtacgaatatgtgaaaaat
gactaagtttaccaataagagagtagggacatgccatggtactgagattt
ttgttttcttgaatttttctttttccaagtttagcaattactaagaaagc
ctgttttagagctggggatatggctcagtgagagtaaccacttactatgt
aagccccacggcctgaatccggatccctaggacccaggaagtgctgaaag
cagcagcccagggcctagaggacccacctcagacaggatacaggacccac
agccagtgctatgctctcttctctactgtgttcctgcatgtatattcaga
catttaaaagctgacttagagccacagctactataccacaagtttatttt
ctctttggctttctaagacagagtctcatttacacagaaactcatttcag
tatgtgtgtgttcttggagcagtatttaccagagagtaacaagactatgc
aagccttaaagtctgaagttgaccctcgaaaccaatggtggaagaaaaga
gccagctcccaaatgttgttgtgtgtcccctcaggcatgcacatgcatgt
gcacacagtataagaacatgttgtgtgtcccctcaggcatgcacatgcat
gtgcacacagtataagaacatggccaggtatggtttgatgcatgtgcctt
ttactcaagagtctgaggcacgataatcactagttctaggacagcacagt
gtgtcttgtgtcaaaagcaaaagaattacaaacaagaaatatttgcttga
aaacagaaatattgagaacttttacatgatttaataatacaattaaagat
acaaaaatgtttagaggattccaaaaattaaatttgtttaaatacaaatt
catttcataatatgaaaacatataataatatacccctaaacacaataatt
ttttctttctacaaaacttttctatactaggaggaattgcagaaaacaca
tttcttgtgacatttaaaataatacatattttacatgaaaagtaatctaa
aaaactctacttcggaaacttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_79830945_79831738
seq2: B6Ng01-209I24.b_48_841

seq1  GAATTCTCCCCTGTTGACTTTGCCAATTAATCAGCAAGTGCTGTCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCCTGTTGACTTTGCCAATTAATCAGCAAGTGCTGTCATTTC  50

seq1  CATTTATAAGATTTAGAAATACATCTACTTTTCTGTTTATGTACCTATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATAAGATTTAGAAATACATCTACTTTTCTGTTTATGTACCTATAG  100

seq1  TTTGAAATTCTCAGGACCTAAATTACTTGAAATGCTAGTTAAGTGGAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATTCTCAGGACCTAAATTACTTGAAATGCTAGTTAAGTGGAAGC  150

seq1  TAGGCATGGTAGTAGAGCACTTCTTTTTAAAGATATATTTATTTATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATGGTAGTAGAGCACTTCTTTTTAAAGATATATTTATTTATTTTT  200

seq1  ACGTATATGAGTACACTGCAGCTGTACAGATGGTTGTTGGGAATTGTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATATGAGTACACTGCAGCTGTACAGATGGTTGTTGGGAATTGTACT  250

seq1  TAGGACCTCTGCTAGCTCAAGGCAACTCTGCTTCCTCAGTCCCTGCTCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCTCTGCTAGCTCAAGGCAACTCTGCTTCCTCAGTCCCTGCTCGC  300

seq1  TCCAGCCCAAAGACTGATTTATTATTGTATGTGAGTACACTGTAGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCCAAAGACTGATTTATTATTGTATGTGAGTACACTGTAGCTGTC  350

seq1  TTCAGACACACCTGAAGAGGACATCAGATCTCATTACAGGTGGTTGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACACACCTGAAGAGGACATCAGATCTCATTACAGGTGGTTGTGAT  400

seq1  CCACCATGTGATTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGTGATTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTC  450

seq1  AGTGTTCTTACCGACTGAGCCATCTCGCCAGCTCAGTAGAGCCCTTACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTTACCGACTGAGCCATCTCGCCAGCTCAGTAGAGCCCTTACCC  500

seq1  CAGCACTGCAGAGGCTAAGGCAGGAGGGTTGCCAGTTTCTCAGGCTAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGCAGAGGCTAAGGCAGGAGGGTTGCCAGTTTCTCAGGCTAGCC  550

seq1  TGAGCTACAAGTGAGACCCTGCCTCAACCAAAAATAGGGCAAAATAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTACAAGTGAGACCCTGCCTCAACCAAAAATAGGGCAAAATAAAGT  600

seq1  ATCATTGTTGTTTTCAAAATGATAGGAGACTTAGCAAATAACTTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTGTTGTTTTCAAAATGATAGGAGACTTAGCAAATAACTTTTTTTT  650

seq1  TGTTTTGTTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTG  700

seq1  GAACTTACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCTGCCTGCC  750

seq1  TCTGCCTCCCGAGTGCTGGGATTAAAGGCGTTCGCCACCACCAC  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCCGAGTGCTGGGATTAAAGGCGTTCGCCACCACCAC  794

seq1: chr14_79982024_79983142
seq2: B6Ng01-209I24.g_66_1188 (reverse)

seq1  CCAAGTTTCCGAAGTAGAG-TTTTTAGATTACTTTTTCAATGTAAATAAT  49
      ||||||||||||||||||| ||||||||||||||||   |||||||  ||
seq2  CCAAGTTTCCGAAGTAGAGTTTTTTAGATTACTTTT--CATGTAAAATAT  48

seq1  GTA-TATTT--AATGTCACAAGAAAT-TGTTTTCTGCAAATTCT-CTAGT  94
      ||| |||||  ||||||||||||||| |||||||||||| | || |||||
seq2  GTATTATTTTAAATGTCACAAGAAATGTGTTTTCTGCAATTCCTCCTAGT  98

seq1  ATAG-AAAGTTTTGTAGAA--GAAAAATTATTGTGTTTAGGGGTATAATA  141
      |||| ||||||||||||||   ||||||||||||||||||||||||| ||
seq2  ATAGAAAAGTTTTGTAGAAAGAAAAAATTATTGTGTTTAGGGGTATATTA  148

seq1  TTATATGTTTTCATATTATGAAATGAATTTGTATTTAAACAAAAATTTAA  191
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  TTATATGTTTTCATATTATGAAATGAATTTGTATTTAAAC--AAATTTAA  196

seq1  ATTTTGGAATCCTCTAAACATTTTTGTATCTTTAATTGTTATTATTAAAT  241
       ||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTTTGGAATCCTCTAAACATTTTTGTATCTTTAATTG-TATTATTAAAT  245

seq1  CATGTAAAAGTTCTCAATATTTCTGTTTTCAAGCAAATATTTCTTGTTTG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAAAGTTCTCAATATTTCTGTTTTCAAGCAAATATTTCTTGTTTG  295

seq1  TAATTCTTTTGCTTTTTGACACAAGACACACTGTGCTGTCCTAGAACTAG  341
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTTTGC-TTTTGACACAAGACACACTGTGCTGTCCTAGAACTAG  344

seq1  TGATTATCGTGCCTCAGACTCTTGAGTAAAAGGCACATGCATC-AACCAT  390
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGATTATCGTGCCTCAGACTCTTGAGTAAAAGGCACATGCATCAAACCAT  394

seq1  ACCTGGCCATGTTCTTATACTGTGTGCACATGCATGTGCATGCCTGAGGG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCCATGTTCTTATACTGTGTGCACATGCATGTGCATGCCTGAGGG  444

seq1  GACACACAACATGTTCTTATACTGTGTGCACATGCATGTGCATGCCTGAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAACATGTTCTTATACTGTGTGCACATGCATGTGCATGCCTGAG  494

seq1  GGGACACACAACAACATTTGGGAGCTGGCTCTTTTCTTCCACCATTGGTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACACAACAACATTTGGGAGCTGGCTCTTTTCTTCCACCATTGGTT  544

seq1  TCGAGGGTCAACTTCAGACTTTAAGGCTTGCATAGTCTTGTTACTCTCTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGGGTCAACTTCAGACTTTAAGGCTTGCATAGTCTTGTTACTCTCTG  594

seq1  GTAAATACTGCTCCAAGAACACACACATACTGAAATGAGTTTCTGTGTAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATACTGCTCCAAGAACACACACATACTGAAATGAGTTTCTGTGTAA  644

seq1  ATGAGACTCTGTCTTAGAAAGCCAAAGAGAAAATAAACTTGTGGTATAGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACTCTGTCTTAGAAAGCCAAAGAGAAAATAAACTTGTGGTATAGT  694

seq1  AGCTGTGGCTCTAAGTCAGCTTTTAAATGTCTGAATATACATGCAGGAAC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGGCTCTAAGTCAGCTTTTAAATGTCTGAATATACATGCAGGAAC  744

seq1  ACAGTAGAGAAGAGAGCATAGCACTGGCTGTGGGTCCTGTATCCTGTCTG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGAGAAGAGAGCATAGCACTGGCTGTGGGTCCTGTATCCTGTCTG  794

seq1  AGGTGGGTCCTCTAGGCCCTGGGCTGCTGCTTTCAGCACTTCCTGGGTCC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGTCCTCTAGGCCCTGGGCTGCTGCTTTCAGCACTTCCTGGGTCC  844

seq1  TAGGGATCCGGATTCAGGCCGTGGGGCTTACATAGTAAGTGGTTACTCTC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATCCGGATTCAGGCCGTGGGGCTTACATAGTAAGTGGTTACTCTC  894

seq1  ACTGAGCCATATCCCCAGCTCTAAAACAGGCTTTCTTAGTAATTGCTAAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCCATATCCCCAGCTCTAAAACAGGCTTTCTTAGTAATTGCTAAA  944

seq1  CTTGGAAAAAGAAAAATTCAAGAAAACAAAAATCTCAGTACCATGGCATG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAAAGAAAAATTCAAGAAAACAAAAATCTCAGTACCATGGCATG  994

seq1  TCCCTACTCTCTTATTGGTAAACTTAGTCATTTTTCACATATTCGTACCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTACTCTCTTATTGGTAAACTTAGTCATTTTTCACATATTCGTACCC  1044

seq1  ATTTGTGAGTATGTGTGCATGTGCATTTGTGTTGATACAAAGTCTCTCTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGAGTATGTGTGCATGTGCATTTGTGTTGATACAAAGTCTCTCTC  1094

seq1  ACTGTGCACCTCTGGGTGGCTTTGAATTC  1119
      |||||||||||||||||||||||||||||
seq2  ACTGTGCACCTCTGGGTGGCTTTGAATTC  1123