BAC Information

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BAC

Clone NameB6Ng01-209P06
Chromosome14 (Build37)
Map Location 7,591,137 - 7,742,084
singlet/doubletdoublet
Overlap geneEG666918, LOC100041700, LOC100042054, LOC100042100
Upstream geneLOC100041442, LOC100041848, LOC100041456, LOC100041758, LOC100041470, LOC100041804, LOC100041487, LOC100041747, LOC100041507, LOC100041836, LOC100041728, LOC100041774, LOC100041530, LOC100041540, LOC100041840, EG666844, LOC666851, LOC100041569, LOC100041970, LOC100042000, EG666874, B930046C15Rik, LOC100041600, LOC100041958, LOC100041964, LOC546590, LOC666906, LOC100042024, LOC100041664, LOC100042077, LOC100041675, LOC666329, EG666833, LOC100042043
Downstream geneEG622781, LOC100041740, LOC100038847, LOC100042129, LOC100041770, LOC100042149, LOC544988, EG626456, LOC100041791, LOC100042164, LOC100042182, LOC100041808, LOC100042192, LOC100042207, EG432817, LOC100042217, LOC100041830, LOC100042235, EG545013, EG666947, LOC623215, LOC100042286, LOC666957, LOC100042263, LOC100042258, LOC100042272, LOC100041874, LOC100042304, LOC100041881, LOC100042312, LOC100041893, ENSMUSG00000058570, EG666976, Flnb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-209P06.bB6Ng01-209P06.g
ACCGA028425GA028426
length910585
definitionB6Ng01-209P06.b B6Ng01-209P06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,591,137 - 7,592,043)(7,741,500 - 7,742,084)
sequence
gaattctcatggaggccagaagcatccagtacccctagagctggagttag
gaggcacccagtgtgggtgctccaaagcaaactccctgctttcagactcc
caaaccctgtctctgtctcaaacacacacatacgttatttttttatagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaaggaaggaaggaagaaagaaagaaaagacattaaaactggaaaagaag
aatgcagcttgcccagggacctgtgtaactcccagagccagggttataat
ccagattgcttcattaatgtgactacatatacagctgtttctatgttcta
aatgttggtatctccccagttcccgttgaagtcctaacttgcatgagcac
ctaaggaacgggtctggttatgatagcagattctgtataaatggaactgg
tgtcttgtaggtggaggggctggagagatggctcagtgactaagaacact
cagtgttcttcctgaggacccacgttcagtgcccagtacccaccttgggc
agctcacagctacctgtaacaccagttccaaaagatccaataccctcttc
tggcctcaggtacctgcatgaacatggtgcacagatagacaggcaggcac
acactcacataaaacaattcaaaacataaagcaagaaacagaataccatc
tccattgtcttataacattaaattctgtcctgtataataaaagtgttctc
ttttgctcctgaatgcacagtataactagttcttgtttttcaactcttcc
aagtcattgtgttttaaggatgtcctaaaaatacgtttgatctcacaact
taccagaccatcctaagagcactacttttagcatgactgtttcctttcat
tgtggtgtat
gaattcccatagctgtggagcaaaccaggcccgcttcaggagcccattga
gggtcttgataatctaaagtactcacactatcttatctgtgtagcattca
gcggggctgttattcaacatcattttctcagagttaaaatcagcctcagt
gggggttgggagaaatgaggaccttcagacagttctggtagtataaaatt
ggttatgtctgttagaagccatgttctgaaagtagaaaagaagtcctcat
tgacccagtccttccagaacaaataggaggtatccaaagagtctagggta
ttcagggttgtagtggtcctcagagcagccctgaaggagaagttatcctg
atgtccatttgctgaagaatgatatggtactgtgtggtgcagcccttcca
tgaactcagtgtgagataatccatgcaagcttttgtccttcaactagtca
gccttttcttactcaaaatagccctgacacaatcacattctggggagaaa
atggttcctttggatcctcttatagacagttcctattactctgggctcat
acctttggacaccaagtcagttaggtgatggaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_7591137_7592043
seq2: B6Ng01-209P06.b_48_957

seq1  GAATTCTCATGGAGGCCAGAAGCATCCAGTACCCCTAGAGCTGGAGTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGGAGGCCAGAAGCATCCAGTACCCCTAGAGCTGGAGTTAG  50

seq1  GAGGCACCCAGTGTGGGTGCTCCAAAGCAAACTCCCTGCTTTCAGACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCACCCAGTGTGGGTGCTCCAAAGCAAACTCCCTGCTTTCAGACTCC  100

seq1  CAAACCCTGTCTCTGTCTCAAACACACACATACGTTATTTTTTTATAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCTGTCTCTGTCTCAAACACACACATACGTTATTTTTTTATAGAA  150

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  200

seq1  AAAGGAAGGAAGGAAGAAAGAAAGAAAAGACATTAAAACTGGAAAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGAAGGAAGAAAGAAAGAAAAGACATTAAAACTGGAAAAGAAG  250

seq1  AATGCAGCTTGCCCAGGGACCTGTGTAACTCCCAGAGCCAGGGTTATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCTTGCCCAGGGACCTGTGTAACTCCCAGAGCCAGGGTTATAAT  300

seq1  CCAGATTGCTTCATTAATGTGACTACATATACAGCTGTTTCTATGTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTGCTTCATTAATGTGACTACATATACAGCTGTTTCTATGTTCTA  350

seq1  AATGTTGGTATCTCCCCAGTTCCCGTTGAAGTCCTAACTTGCATGAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGTATCTCCCCAGTTCCCGTTGAAGTCCTAACTTGCATGAGCAC  400

seq1  CTAAGGAACGGGTCTGGTTATGATAGCAGATTCTGTATAAATGGAACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAACGGGTCTGGTTATGATAGCAGATTCTGTATAAATGGAACTGG  450

seq1  TGTCTTGTAGGTGGAGGGGCTGGAGAGATGGCTCAGTGACTAAGAACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGTAGGTGGAGGGGCTGGAGAGATGGCTCAGTGACTAAGAACACT  500

seq1  CAGTGTTCTTCCTGAGGACCCACGTTCAGTGCCCAGTACCCACCTTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCTTCCTGAGGACCCACGTTCAGTGCCCAGTACCCACCTTGGGC  550

seq1  AGCTCACAGCTACCTGTAACACCAGTTCCAAAAGATCCAATACCCTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACAGCTACCTGTAACACCAGTTCCAAAAGATCCAATACCCTCTTC  600

seq1  TGGCCTCAGGTACCTGCATGAACATGGTGCACAGATAGACAGGCAGGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCAGGTACCTGCATGAACATGGTGCACAGATAGACAGGCAGGCAC  650

seq1  ACACTCACATAAAACAATTCAAAACATAAAGCAAGAAACAGAATACCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCACATAAAACAATTCAAAACATAAAGCAAGAAACAGAATACCATC  700

seq1  TCCATTGTCTTATAACATTAAATTCTGTCCTGTATAATAAAAGTGTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGTCTTATAACATTAAATTCTGTCCTGTATAATAAAAGTGTTCTC  750

seq1  -TTTGCTCCTGAATGCACAGTATAACTAGTTC-TGTTTTTCAACTCTTCC  798
       ||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTTGCTCCTGAATGCACAGTATAACTAGTTCTTGTTTTTCAACTCTTCC  800

seq1  AAGTCATTGTGTTTTAAGGATGTCCTAAAAATACGGTTTGATCTCACAAC  848
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGTCATTGTGTTTTAAGGATGTCCTAAAAATAC-GTTTGATCTCACAAC  849

seq1  -TACCAGACCATCCTAAGAGCACTACTTTTAGCATGACTGTTTTCATTCA  897
       |||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  TTACCAGACCATCCTAAGAGCACTACTTTTAGCATGACTGTTTCCTTTCA  899

seq1  TTGT-GTGTAT  907
      |||| ||||||
seq2  TTGTGGTGTAT  910

seq1: chr14_7741500_7742084
seq2: B6Ng01-209P06.g_66_650 (reverse)

seq1  TTTTCCATCACCTAACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATCACCTAACTGACTTGGTGTCCAAAGGTATGAGCCCAGAGTAA  50

seq1  TAGGAACTGTCTATAAGAGGATCCAAAGGAACCATTTTCTCCCCAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAACTGTCTATAAGAGGATCCAAAGGAACCATTTTCTCCCCAGAATG  100

seq1  TGATTGTGTCAGGGCTATTTTGAGTAAGAAAAGGCTGACTAGTTGAAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTGTCAGGGCTATTTTGAGTAAGAAAAGGCTGACTAGTTGAAGGA  150

seq1  CAAAAGCTTGCATGGATTATCTCACACTGAGTTCATGGAAGGGCTGCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCTTGCATGGATTATCTCACACTGAGTTCATGGAAGGGCTGCACC  200

seq1  ACACAGTACCATATCATTCTTCAGCAAATGGACATCAGGATAACTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTACCATATCATTCTTCAGCAAATGGACATCAGGATAACTTCTCC  250

seq1  TTCAGGGCTGCTCTGAGGACCACTACAACCCTGAATACCCTAGACTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGGCTGCTCTGAGGACCACTACAACCCTGAATACCCTAGACTCTTT  300

seq1  GGATACCTCCTATTTGTTCTGGAAGGACTGGGTCAATGAGGACTTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACCTCCTATTTGTTCTGGAAGGACTGGGTCAATGAGGACTTCTTTT  350

seq1  CTACTTTCAGAACATGGCTTCTAACAGACATAACCAATTTTATACTACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCAGAACATGGCTTCTAACAGACATAACCAATTTTATACTACCA  400

seq1  GAACTGTCTGAAGGTCCTCATTTCTCCCAACCCCCACTGAGGCTGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTCTGAAGGTCCTCATTTCTCCCAACCCCCACTGAGGCTGATTTT  450

seq1  AACTCTGAGAAAATGATGTTGAATAACAGCCCCGCTGAATGCTACACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGAGAAAATGATGTTGAATAACAGCCCCGCTGAATGCTACACAGA  500

seq1  TAAGATAGTGTGAGTACTTTAGATTATCAAGACCCTCAATGGGCTCCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGTGTGAGTACTTTAGATTATCAAGACCCTCAATGGGCTCCTGA  550

seq1  AGCGGGCCTGGTTTGCTCCACAGCTATGGGAATTC  585
      |||||||||||||||||||||||||||||||||||
seq2  AGCGGGCCTGGTTTGCTCCACAGCTATGGGAATTC  585