BAC Information

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BAC

Clone NameB6Ng01-210F07
Chromosome14 (Build37)
Map Location 99,594,613 - 99,790,321
singlet/doubletdoublet
Overlap geneD14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789
Upstream geneLOC635593, LOC619716, LOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3
Downstream geneLOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210F07.bB6Ng01-210F07.g
ACCGA028696GA028697
length4231,135
definitionB6Ng01-210F07.b B6Ng01-210F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,789,893 - 99,790,321)(99,594,613 - 99,595,750)
sequence
ctgccttaattttttaaattccatacataaaatgttccagaatggctatg
ggagtgcaagcctgtaattccagcacctgggaggtgaaggcagggggatc
aggagatagagagcagcctctgccccgtagtgagtttaaggccagctggg
actacaggaaaccctgcttcgaaaacaacggtgttttagactacagatgt
agctcgatatctagcttaaaaagaacccagatttgattttctcatcttca
ctaaaacatggtagtgctccatgtctgtaaccccagcactcaggaggtaa
gggaatcaagagttcaaagtcatccttgtctacctgatgaattcgagacc
agcctgggctacaggacaccctgcctaagaaagagagaaaaaaaaagaaa
aaagaaagaaggggaggggaggg

gaattctccattcataggttaaattgataggctaactaatatagaacatg
aaaatacagtgcaggtcttgagaacagcatgatttctcggcattactggt
acttcttaaaaaaacattgtttcctttcagtccttggaattgtttaccta
gagagcaaaggctacacagagaaaccctgtcttgaaaaaccataaccaac
caaacaaaccaagggcagttatagagtgcacagcacggtgggctgtgggt
atgtgcctgttatcctaacacttggactaatgtacggggagcagggattg
aggccagcctaggatacagacttaagaccctgccagggatggggacataa
aacactggcaggaagggggttcctttagtacagactctgcctgtactgtg
gtcattctccgcatgttattacacgcctcttccacctccacatgcagtag
gaaacctgttggattatgttttgtattacaaaattcataatattgactag
gataaacactttccaaaatgtaagcttttgcacataatattcaagtaatt
tcaaataataattttaataattcaaataatttttgcacacagtattcaaa
taattccaggtaataattttaagtaatttgtaatttggaaacttttgtta
aaatgagaaagctataaatggctctcttttctggcaagctagtaacataa
tgtaattctgcctcaatgggcagagctaaaaaccatagtcaagtaatcag
tataccacacttaccatatggaaatgtcagggttgctaaagtcttgctcg
tgtggcgttctttgctttgtattgccattgccttctgttactatgtgtgt
tgctaggaaaggatggggtccaccttctagcatacaaatacctgttgtgt
gtttaggcagcattctactttggtgtacataagttgcttttcatttttat
tttacctagtgtccacttggcaagagagttcttcagttagaaaacaaaat
tcattatttaaaaagatctggaccattcaaagaacaggtagacagctttt
cacaggagtggagtagctggtcgaagaccagaagcaaggcgcctcgcatg
cctctgcatgcctgttacccacgaaagttatttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99789893_99790321
seq2: B6Ng01-210F07.b_45_473 (reverse)

seq1  CCCTCCCCTCCCCTTCTTTCTTTTTTCTTTTTTTTTCTCTCTTTCTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCTCCCCTTCTTTCTTTTTTCTTTTTTTTTCTCTCTTTCTTAGG  50

seq1  CAGGGTGTCCTGTAGCCCAGGCTGGTCTCGAATTCATCAGGTAGACAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGTCCTGTAGCCCAGGCTGGTCTCGAATTCATCAGGTAGACAAGG  100

seq1  ATGACTTTGAACTCTTGATTCCCTTACCTCCTGAGTGCTGGGGTTACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTGAACTCTTGATTCCCTTACCTCCTGAGTGCTGGGGTTACAGA  150

seq1  CATGGAGCACTACCATGTTTTAGTGAAGATGAGAAAATCAAATCTGGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCACTACCATGTTTTAGTGAAGATGAGAAAATCAAATCTGGGTT  200

seq1  CTTTTTAAGCTAGATATCGAGCTACATCTGTAGTCTAAAACACCGTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAGCTAGATATCGAGCTACATCTGTAGTCTAAAACACCGTTGTT  250

seq1  TTCGAAGCAGGGTTTCCTGTAGTCCCAGCTGGCCTTAAACTCACTACGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAAGCAGGGTTTCCTGTAGTCCCAGCTGGCCTTAAACTCACTACGGG  300

seq1  GCAGAGGCTGCTCTCTATCTCCTGATCCCCCTGCCTTCACCTCCCAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCTGCTCTCTATCTCCTGATCCCCCTGCCTTCACCTCCCAGGTG  350

seq1  CTGGAATTACAGGCTTGCACTCCCATAGCCATTCTGGAACATTTTATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATTACAGGCTTGCACTCCCATAGCCATTCTGGAACATTTTATGTA  400

seq1  TGGAATTTAAAAAATTAAGGCAGGAATTC  429
      |||||||||||||||||||||||||||||
seq2  TGGAATTTAAAAAATTAAGGCAGGAATTC  429


seq1: chr14_99594613_99595750
seq2: B6Ng01-210F07.g_66_1200

seq1  GAATTCTCCATTCATAGGTTAAATTGATAGGCTAACTAATATAGAACATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTCATAGGTTAAATTGATAGGCTAACTAATATAGAACATG  50

seq1  AAAATACAGTGCAGGTCTTGAGAACAGCATGATTTCTCGGCATTACTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAGTGCAGGTCTTGAGAACAGCATGATTTCTCGGCATTACTGGT  100

seq1  ACTTCTTAAAAAAACATTGTTTCCTTTCAGTCCTTGGAATTGTTTACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTTAAAAAAACATTGTTTCCTTTCAGTCCTTGGAATTGTTTACCTA  150

seq1  GAGAGCAAAGGCTACACAGAGAAACCCTGTCTTGAAAAACCATAACCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAAAGGCTACACAGAGAAACCCTGTCTTGAAAAACCATAACCAAC  200

seq1  CAAACAAACCAAGGGCAGTTATAGAGTGCACAGCACGGTGGGCTGTGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACCAAGGGCAGTTATAGAGTGCACAGCACGGTGGGCTGTGGGT  250

seq1  ATGTGCCTGTTATCCTAACACTTGGACTAATGTACGGGGAGCAGGGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCCTGTTATCCTAACACTTGGACTAATGTACGGGGAGCAGGGATTG  300

seq1  AGGCCAGCCTAGGATACAGACTTAAGACCCTGCCAGGGATGGGGACATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGCCTAGGATACAGACTTAAGACCCTGCCAGGGATGGGGACATAA  350

seq1  AACACTGGCAGGAAGGGGGTTCCTTTAGTACAGACTCTGCCTGTACTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTGGCAGGAAGGGGGTTCCTTTAGTACAGACTCTGCCTGTACTGTG  400

seq1  GTCATTCTCCGCATGTTATTACACGCCTCTTCCACCTCCACATGCAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCTCCGCATGTTATTACACGCCTCTTCCACCTCCACATGCAGTAG  450

seq1  GAAACCTGTTGGATTATGTTTTGTATTACAAAATTCATAATATTGACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTGTTGGATTATGTTTTGTATTACAAAATTCATAATATTGACTAG  500

seq1  GATAAACACTTTCCAAAATGTAAGCTTTTGCACATAATATTCAAGTAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACACTTTCCAAAATGTAAGCTTTTGCACATAATATTCAAGTAATT  550

seq1  TCAAATAATAATTTTAATAATTCAAATAATTTTTGCACACAGTATTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAATAATTTTAATAATTCAAATAATTTTTGCACACAGTATTCAAA  600

seq1  TAATTCCAGGTAATAATTTTAAGTAATTTGTAATTTGGAAACTTTTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCCAGGTAATAATTTTAAGTAATTTGTAATTTGGAAACTTTTGTTA  650

seq1  AAATGAGAAAGCTATAAATGGCTCTCTTTTCTGGCAAGCTAGTAACATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAAAGCTATAAATGGCTCTCTTTTCTGGCAAGCTAGTAACATAA  700

seq1  TGTAATTCTGCCTCAATGGGCAGAGCTAAAAACCATAGTCAAGTAATCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTCTGCCTCAATGGGCAGAGCTAAAAACCATAGTCAAGTAATCAG  750

seq1  TATACCACACTTACCATATGGAAATGTCAGGGTTGCTAAAGTCTTGCTCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCACACTTACCATATGGAAATGTCAGGGTTGCTAAAGTCTTGCTCG  800

seq1  TGTGGCGTTCTTTGCTTTGTATTGCCATTGCCTTCTGTTACTATGTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCGTTCTTTGCTTTGTATTGCCATTGCCTTCTGTTACTATGTGTGT  850

seq1  TGCTAGGAAAGGAT-GGGTCCACCTTCTAGCATACAAATACCTGTTGTGT  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGCTAGGAAAGGATGGGGTCCACCTTCTAGCATACAAATACCTGTTGTGT  900

seq1  GTTTAGGCAGCATTCTACTTTGGTGTACATAAG-TGCTTTTCATTTT--A  946
      ||||||||||||||||||||||||||||||||| |||||||||||||   
seq2  GTTTAGGCAGCATTCTACTTTGGTGTACATAAGTTGCTTTTCATTTTTAT  950

seq1  TTTACCTAGTGTCCACTTGGCAAGAAGAGTTCTTCAGTTAGAAAAACAAA  996
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  TTTACCTAGTGTCCACTTGGCAAG-AGAGTTCTTCAGTTAG-AAAACAAA  998

seq1  ATTCATTAATTTTAAAAGATCTGGACCATCAAAAGAACCAAGTAAGACAG  1046
      ||||||| |||| ||||||||||||||||  |||||||  ||  ||||||
seq2  ATTCATT-ATTTAAAAAGATCTGGACCATTCAAAGAAC--AGGTAGACAG  1045

seq1  C-TTTCACAAGAGGTGAGTAGCTGGGTCGGAAGACCCAGAAGCAAGGCG-  1094
      | ||||||| |||  |||||||| |||| ||||| |||||||||||||| 
seq2  CTTTTCACAGGAGTGGAGTAGCT-GGTC-GAAGA-CCAGAAGCAAGGCGC  1092

seq1  CTCGCTTGCCTCTGCATGCCCTGTTACCACCGACAGTTATTTGC  1138
      ||||| |||||||||||| |||||||||  ||| ||||||||||
seq2  CTCGCATGCCTCTGCATG-CCTGTTACCCACGAAAGTTATTTGC  1135


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