BAC Information

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BAC

Clone NameB6Ng01-211F11
Chromosome14 (Build37)
Map Location 36,721,132 - 36,721,561
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277
Downstream geneLOC665933, 4930474N05Rik, Gcap14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211F11.bB6Ng01-211F11.g
ACCGA029435GA029436
length9951,039
definitionB6Ng01-211F11.b B6Ng01-211F11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggagtatactatataacaaagtaactacctatacttaataat
tttgattcttcaaaatagtgttgtagtgtcagtgaagatattttcccaat
ctataggatgccattttattcagttgacagtatttttttccttatagaaa
ctttacagcttatgagctctaatttattaattgttgatcttgattggtgt
tctgttagggaaattgtcttttgtaccaatccatccaaagctatttctca
ctttctcttctatgaagtttagtgtattgggctttatattgaggtccttg
atgcacttgaacttgacttttgtgcaaggtgataaatatggatttattta
tagtcttctatgtgcagatatccagtttgatcagcaccatttgttgaaga
tactttctcttttccatttttatgctttttttcttctttgtcaaaaatca
gttgtccatagctgtgtgggtttatgtttggatatttgattctatgccat
taattaacctgtttgtctctttactaataacatagacaaagtttggagct
gagatgaaaggatggaccatgtagagactgccttatccagggatccacgc
cataatcagcatccaaacgctgacaccattgcatacactagcaagatttt
atcgaaaggacccagatgtagctgtctcttgtgagactatgccggggcct
agcaaacacagaagtggatgcccacagtcagctcatggatggatcacagg
gctcccaatggaggagctagagaaagtacccaaggagctaaagggatctg
caaccctataggtggaacaacgatatgaactaaccagtaccccggagctc
ttgactctagctgcatatgtatcaaaagatggcctagtcggccatcactg
caaagagaggcccattggacacacaaacttttatatgccccagaacaggg
gaaccgccagggccaaaaatgggggagtgggtgggttagggggaa

gaattctttgtttagctctgagcctcatatattaatggggttatttgatt
ttctggagtccagcttcttgagttctttatatatattggatattagtccc
ctacctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccttacagaagctttgcattttat
gaggacccatttgtagaatatcgatcatacagcacaagccattgctgttt
tattcaggaattattcccttgtgcacacatctttgaggcttttccccact
ttctcttctataagtttcagtgtctgtggttttatgtggagttccttaat
ccacttagatttgactttagtacaaggagataggaatggatcaatttaca
ttcttctacagttctaccagcaccattttttgaaaatgctatccttttcc
cactggatggttttagctcccttgtcaaagatcaagtgaccatgggtgtg
tgggttcatttctgggtcttcaattctattccattggtctacttgtctgt
tgctatacaactaccatgcagtttttatcacaattgctctgtagtacagc
tttaggtcaggcatggtgattccaccagaagttcttttatccttgagaag
agtttttgctatcctaggtttttgttattccagatgaatttgttgattgc
tctttctaattcgttgaagaattgagttggaattttgatggggattgcat
tgaatctgtagattgcttttggcaaaatagcctttttttttttttttttt
taatatattgatcctgccaatccatgagcacggggaagatctttccatct
tctgagatctttaatttctgtcttcggagagttgaagttgttttcataca
gatctttcacttcctgagttagagtccacgcaaggtatttatattatttg
tgactattgagaaggtgttgtatccctaatttcttctcagcctgttaatc
ttgtgtagtaggaggccatggacttgttggagttatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_36721132_36721561
seq2: B6Ng01-211F11.g_669_1103 (reverse)

seq1  AAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATAAACA  50
       ||| |||||| |||||||| |||||||    ||||||||   || ||||
seq2  -AAAATAACTCCAACAAGTCCATGGCCTCCTACTACACAA--GATTAACA  47

seq1  GGCTGAGAAAGAAATTAGAGATACAACACCCTTCTCAATAGTCACAAATA  100
      ||||||| |||||||||| ||||||||| |||||||||||||||||||||
seq2  GGCTGAG-AAGAAATTAGGGATACAACA-CCTTCTCAATAGTCACAAATA  95

seq1  ATATAAAATATCTTGGCGT-GACTCTAACTAAGGAAGTGAAAGAACTGTA  149
      |||| ||||| ||| |||| |||||||||| ||||||||||||| |||||
seq2  ATAT-AAATACCTT-GCGTGGACTCTAACTCAGGAAGTGAAAGATCTGTA  143

seq1  TGAAAAGAACTTCAAGTATATGAAGAAAGAAATTAAAGAAGGTCTCAGAA  199
      |||||| |||||||| | |  ||||| ||||||||||||   ||||||||
seq2  TGAAAACAACTTCAACTCTCCGAAGACAGAAATTAAAGA---TCTCAGAA  190

seq1  GATGGAAAGATCT--CCCATGCTCATGGATTGGCAGGATCAATATAGT--  245
      |||||||||||||  ||| ||||||||||||||||||||||||||| |  
seq2  GATGGAAAGATCTTCCCCGTGCTCATGGATTGGCAGGATCAATATATTAA  240

seq1  -----------AAAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAA  284
                 ||||| |||||| ||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAGGCTATTTTGCCAAAAGCAATCTACAGATTCAA  290

seq1  TGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTGGAAAGAA  334
      |||||||||||||||||||||||||||||||||||||||||| |||||| 
seq2  TGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGAG  340

seq1  CAATCTGCAAATTCATCTGGAATAACAAAGAACCTAGGATAGCAAAAACT  384
      |||||  |||||||||||||||||||||| ||||||||||||||||||||
seq2  CAATCAACAAATTCATCTGGAATAACAAA-AACCTAGGATAGCAAAAACT  389

seq1  CTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACC  430
      |||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTCTCAAGGATAAAAGAACTTCTGGTGGAATCACCATGCCTGACC  435


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