BAC Information

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BAC

Clone NameB6Ng01-211M05
Chromosome14 (Build37)
Map Location 103,075,784 - 103,076,916
singlet/doubletsinglet
Overlap genenone
Upstream geneUchl3, Lmo7, LOC100043795, LOC545567, LOC669278
Downstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel, LOC100043448, Slain1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211M05.bB6Ng01-211M05.g
ACCGA029734GA029735
length1,1561,072
definitionB6Ng01-211M05.b B6Ng01-211M05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctatttccatcactgcagagaatgaaagcctgccttggtgttg
tttttaattccctgcaagtccttccacaatgcaaatgtcacgttgaaaaa
tctggcacttgctttaaggaaaggtaagttgcccagatccccggaaaatg
ttttgacattttggtgacccttgcattctgttttataatagacgctccaa
ttaagctcagggctttcatcgtatttactacactggccctgggaacgaag
gctggcaaaccctgtgctgtccttgctctgagagcagaaccaagtattct
ccaagaaggagcagggactctcagccacctcccaagatgacagagtcaga
aaaaaactgctgtcaagaggcttacagttttcccatagcacagcctttta
ttttttctcttttcttttcttttttttttttttttacctggatgaatccc
aacacagatgttcactctggctatcagtacacagggaagagctgaataca
gaaaagttctggtccttcgattctgagtcctaggtaaaccccaagcctct
tcgcccttcgaacctgctttctctgttgaggggctgaagtcaacgatgct
cggggtctcttcaacctttttgtttcgggttgtgcacgtctattgtttac
gggcaggaagcagaaggcagacaagtgcctgtttcacaatgtgatttttg
cagcatagtcaactgccttctgtttccagtggaacttcaagtgtgaggac
aaggacagaatcgctctgacgtttgaggggcagatctccttttacttagt
tccagagaccttggcaggctccaggtgccccagtgacatgtatattttgt
ttacgaatttgcttcaaatgatactgaactaactaagaaagtctggtccc
ctcttttaagttagtccggaatcttactttgaggctgcccgtcatcatca
aggtagcttaaggagaaaagcgccaatggtggtcaaacaaacgtggtgtg
ggttcttgttgagacctttcaagtaccctaagcaagttccaatttgtgtc
ctctgttcttcccaagtctcccttaatgtcttctaatctccttttagtgc
tggtggcccttaataaccttccctctctacattccctcttccccttcaac
ccctct
gaattctttaaggctaatccttttctccttgttattttgtcaacaaccag
caggtatcaggtcctctctaggtgtctctgggtctgagaccttccagatc
tagaatgtggtttgtttccctcaagcggtcatgtggaacactgaccttga
agaatggtcagttcaagaacataagcatgggccatgagagtttggaaaac
tttagaattagagttaacttcttaaagtgtgttaactgtgttctctcaaa
tctatatgttgaaactttagttgccagggtggtggtcttgaaagtgacca
tcaggagacgagcaagatatgagggtgagggaacttcctgaatgggctta
gtgacccaataaaagatgcaaagagcatgcccatccagtcgccctccctt
ttcccttgccacaggaagtctcaggagtcgtcctttctatcacatgcacg
tgacctgtgaacactatctgtacaataaccctgctctagacactggatcc
accagcaccacattctggtgcccccaacctcaaggattgtaagaaagaga
ttttatttatttatttatttatttatttatttatttatttataaattgta
gtcaggactctttagattgcgtgaattgtctattacattggtgggtttca
aaacagcaactatgttaatagcagctttattcctaatagctagaaactgg
gaacaacccagatgtccttcaactgaagaaaatgaaaaaaaaaaaaaaaa
gtaaagagaaaaagaaaaagtaaagaaaaatgtggttcattttacacact
gaaatactacggagctattaaaaacaaggacaccatgaattttgtagaca
aatggatgggaactagaaaatatcctggagtggaggtaatccagactcaa
aagggacatgcatggcacgtactccactttaaaagtgggtattaaccatt
aaagtacagggatagccacactatatcacagcttcccagaagagccaatt
gacaaggaggggccaaggaggatgcttgatctcattcagaaaggaagata
aaaatagactttgggaggtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_103075784_103076916
seq2: B6Ng01-211M05.b_47_1202

seq1  GAATTCCCTATTTCCATCACTGCAGAGAATGAAAGCCTGCCTTGGTGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTATTTCCATCACTGCAGAGAATGAAAGCCTGCCTTGGTGTTG  50

seq1  TTTTTAATTCCCTGCAAGTCCTTCCACAATGCAAATGTCACGTTGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTCCCTGCAAGTCCTTCCACAATGCAAATGTCACGTTGAAAAA  100

seq1  TCTGGCACTTGCTTTAAGGAAAGGTAAGTTGCCCAGATCCCCGGAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACTTGCTTTAAGGAAAGGTAAGTTGCCCAGATCCCCGGAAAATG  150

seq1  TTTTGACATTTTGGTGACCCTTGCATTCTGTTTTATAATAGACGCTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATTTTGGTGACCCTTGCATTCTGTTTTATAATAGACGCTCCAA  200

seq1  TTAAGCTCAGGGCTTTCATCGTATTTACTACACTGGCCCTGGGAACGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCTCAGGGCTTTCATCGTATTTACTACACTGGCCCTGGGAACGAAG  250

seq1  GCTGGCAAACCCTGTGCTGTCCTTGCTCTGAGAGCAGAACCAAGTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCAAACCCTGTGCTGTCCTTGCTCTGAGAGCAGAACCAAGTATTCT  300

seq1  CCAAGAAGGAGCAGGGACTCTCAGCCACCTCCCAAGATGACAGAGTCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGGAGCAGGGACTCTCAGCCACCTCCCAAGATGACAGAGTCAGA  350

seq1  AAAAAACTGCTGTCAAGAGGCTTACAGTTTTCCCATAGCACAGCCTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTGCTGTCAAGAGGCTTACAGTTTTCCCATAGCACAGCCTTTTA  400

seq1  TTTTTTCTCTTTTCTTTTCTTTTTTTTTTTTTTTTACCTGGATGAATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTCTTTTCTTTTCTTTTTTTTTTTTTTTTACCTGGATGAATCCC  450

seq1  AACACAGATGTTCACTCTGGCTATCAGTACACAGGGAAGAGCTGAATACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGATGTTCACTCTGGCTATCAGTACACAGGGAAGAGCTGAATACA  500

seq1  GAAAAGTTCTGGTCCTTCGATTCTGAGTCCTAGGTAAACCCCAAGCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTTCTGGTCCTTCGATTCTGAGTCCTAGGTAAACCCCAAGCCTCT  550

seq1  TCGCCCTTCGAACCTGCTTTCTCTGTTGAGGGGCTGAAGTCAACGATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCTTCGAACCTGCTTTCTCTGTTGAGGGGCTGAAGTCAACGATGCT  600

seq1  CGGGGTCTCTTCAACCTTTTTGTTTCGGGTTGTGCACGTCTATTGTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGTCTCTTCAACCTTTTTGTTTCGGGTTGTGCACGTCTATTGTTTAC  650

seq1  GGGCAGGAAGCAGAAGGCAGACAAGTGCCTGTTTCACAATGTGATTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGGAAGCAGAAGGCAGACAAGTGCCTGTTTCACAATGTGATTTTTG  700

seq1  CAGCATAGTCAACTGCCTTCTGTTTCCAGTGGAACTTCAAGTGTGAGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAGTCAACTGCCTTCTGTTTCCAGTGGAACTTCAAGTGTGAGGAC  750

seq1  AAGGACAGAATCGCTCTGACGTTTGAGGGGCAGATCTCCTTTTACTTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGAATCGCTCTGACGTTTGAGGGGCAGATCTCCTTTTACTTAGT  800

seq1  TCCAGAGACCTTGGCAGGCTCCAGGTGCCCCAGTGACATGTATATTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGACCTTGGCAGGCTCCAGGTGCCCCAGTGACATGTATATTTTGT  850

seq1  TTACGAATTTGCTTCAAATGATACTGAACTAACTAAGAAAGTCTGGTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAATTTGCTTCAAATGATACTGAACTAACTAAGAAAGTCTGGTCCC  900

seq1  CTCTTTTAAGTTAGTCCGGAATCTTACTTTGA-GCTGCCCGTCATCATCA  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTCTTTTAAGTTAGTCCGGAATCTTACTTTGAGGCTGCCCGTCATCATCA  950

seq1  AGGTAGCTTAA-GAG-AAAGCGCCAAT-GTGGTCAAACAAACGT-GTGTG  995
      ||||||||||| ||| ||||||||||| |||||||||||||||| |||||
seq2  AGGTAGCTTAAGGAGAAAAGCGCCAATGGTGGTCAAACAAACGTGGTGTG  1000

seq1  G--TCTTG-TGA-ACCTTTCAAGTACCC-AAGCA--GTCCATTTTGT---  1035
      |  ||||| ||| ||||||||||||||| |||||   |||| |||||   
seq2  GGTTCTTGTTGAGACCTTTCAAGTACCCTAAGCAAGTTCCAATTTGTGTC  1050

seq1  CTCTGTTCTTCCC-AGTTTCTCTT-ATGTCTTCTAATCTCC-TTTAGT-C  1081
      ||||||||||||| ||| || ||| |||||||||||||||| |||||| |
seq2  CTCTGTTCTTCCCAAGTCTCCCTTAATGTCTTCTAATCTCCTTTTAGTGC  1100

seq1  TTGTG--CCTTTATAACCTTCCTTCTCTAC--TCCCTCTTCCTCTTCACC  1127
      | |||  |||| |||||||||| |||||||  |||||||||| ||||| |
seq2  TGGTGGCCCTTAATAACCTTCCCTCTCTACATTCCCTCTTCCCCTTCAAC  1150

seq1  CCCTCT  1133
      ||||||
seq2  CCCTCT  1156