BAC Information

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BAC

Clone NameB6Ng01-213E13
Chromosome14 (Build37)
Map Location 83,625,248 - 83,766,229
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC100043773, LOC100043279, LOC100043775, LOC100043776, LOC100043280, LOC100043285
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213E13.bB6Ng01-213E13.g
ACCGA030858GA030859
length1,190992
definitionB6Ng01-213E13.b B6Ng01-213E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,765,053 - 83,766,229)(83,625,248 - 83,626,021)
sequence
gaattcacaaagattttgcatatactcataatttctgcaaatctgtgcac
atatctaattcttggtgttaactctttttttcttttgtagtttattccat
ttgtcatttttagttattgataaagtcaaggacttatgtgaatcaatata
aaatattgtcattgttttattgaatatatgtttgatacttcattgactgt
tccattacatttttacttacttgcaactcattcgtttatattaatgaaca
tatttgatgtttttcttgtctcactaatcaatgacccaagtaatctacat
tcaagctttttcccctatttttattgaaattagagttgttcattccctat
atatattgtaaattcttcatctctgaacattccctatgttccttcataga
ttttttttttttgcagagccaaatttcaaagaaatattttctttttactt
tttcccctgtgatctctgagaagtttcaatccattagtgatgctctgtcc
cttttgtttttctttttcttttttatttttcttttttttttttttttttt
tttttttttttttactggatatttcctttattcacatttcaaatgttatc
ccctttcctggtttccccctccaaaaaagcccctattcatcctccttccc
actgcttctaggagggtgtttcttcaccaacctacccactcccacattct
catcctcaatacccctaaaacaaacattttatgtatccattgacattctg
attaaaataatttctaatatttttcttttcttttcttttttgacactttt
tattcttagcactgtagatttttaacatgaatatatacatatatgtatat
atgtgtgtatgtggtgtgtattcttcatatacactctttgcccttgtttc
caacaatcctagaaactttgaaaagtaaaaaatttaaaactagtgttgac
aaagtgtccattggcaaaaaaagaacatagaatggtatgggaaagagcat
cctactattttggaattaatgtaaacttttgtactcaaatgtaaatatat
ccacacaatggaccctcaaatctactttgtgtgtatttttcccccctgga
atacacgtataaaaattttcaaaatcattttgtgtttattctttcaagaa
gtgttgctcacaactgtcaactgagagagtacaaatagtc

gaattcataaacggaggtcctatgttcctgttccattcgtcttcttccct
gggcttactgtccatatttccttctacattccattcttgtactaaaggct
gcctttttcttccttattaaatcctttttatcagcatgactgagaaggct
tttatttcttttactttactggaaagaattttcatttctcagtgtcataa
ctgccacgtctttttactcaggaactattcatgctttatacatgtactta
gtactgcataataattccacactaagcatgttatccataaataaacaaac
tcaaagaaaaaaatcacatgatcatctccttagatgcagaaaaataattt
gacaaaatataacaccccttcatgttaaaagtattggagagatcaggaat
tcaaggcccatacctaaatataataaaagtaatttactgcaaactaacag
acaacatcaaattaaatggagagatacttgaagcaataccactgaactca
gggacaagacaaggatgctcactctccccattactattcaaatatagtac
tcacaagtgttagctaaaagtataagacaacaaaaaagagatcaagggga
tacaaattgataaagaagaaataaaggtatcagtatttgcagatgatatg
atagtaaaatgaagcaaactcaaaaattctataagagaagttctccagct
tataaacaacttcatcaaagtggccagatgtaaaattaattcaaatacat
cagtaaccttccttatacaaaggataaacagactaagaaagaaattaggg
aaacaatatctttcacaatagccataaataatataaaatatcttggggta
actctaaccaaacaagtgaaagacctatatgaaataactttcaagtatct
aaagaaaggaatcaaagaggatctcagaaaatggagagatctgccatgtt
catgggattggcagaattaacacagtaaaatgtgtatcctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_83765053_83766229
seq2: B6Ng01-213E13.b_47_1236 (reverse)

seq1  GACTATTTG-ACTCCTCCAGGTTTGACAGTTGTGAGCAACACTCCTGTAA  49
      ||||||||| ||||   |||  ||||||||||||||||||||| ||  ||
seq2  GACTATTTGTACTCTCTCAG--TTGACAGTTGTGAGCAACACTTCTTGAA  48

seq1  AG-ATAAAC---AAATGTATTTTGTAATATTTTTATACTTGTATTTCCAA  95
      || ||||||   ||||| |||||| || |||||||||| ||||||  | |
seq2  AGAATAAACACAAAATG-ATTTTG-AAAATTTTTATACGTGTATT--CCA  94

seq1  AGGGGGAAAAATACACA-GAAGTAGGATTGGAGGTC--ATGTGTAGAT-T  141
       ||||||||||||||||  ||||||  |||  ||||   ||||| ||| |
seq2  GGGGGGAAAAATACACACAAAGTAGATTTGAGGGTCCATTGTGTGGATAT  144

seq1  ATTTACACTATAGTACAAAAG-TTACATT-ATTCC-AAATAGTAGGATGC  188
      ||||||| |  |||||||||| ||||||| ||||| ||||||||||||||
seq2  ATTTACATTTGAGTACAAAAGTTTACATTAATTCCAAAATAGTAGGATGC  194

seq1  TCTTTCCCATACCA-TCTATG-TCTTTTTTTG-CAATGGACACTTTGTCA  235
      |||||||||||||| |||||| |||||||||| |||||||||||||||||
seq2  TCTTTCCCATACCATTCTATGTTCTTTTTTTGCCAATGGACACTTTGTCA  244

seq1  ACACTAGTTTTAAA-TTTTTACTTTTCAAAGTTTCTAGGA-TGTTGG-AA  282
      |||||||||||||| ||||||||||||||||||||||||| |||||| ||
seq2  ACACTAGTTTTAAATTTTTTACTTTTCAAAGTTTCTAGGATTGTTGGAAA  294

seq1  CAAGGGCAAAGAGTGTATATGAAGAATACACA-CACATACACACATATAT  331
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAAGGGCAAAGAGTGTATATGAAGAATACACACCACATACACACATATAT  344

seq1  ACATATATGTATATATTCATGTTAAAAATCTACAGTGCTAAGAATAAAAA  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATGTATATATTCATGTTAAAAATCTACAGTGCTAAGAATAAAAA  394

seq1  GTGTCAAAAAAGAAAAGAAAAGAAAAATATTAGAAATTATTTTAATCAGA  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAAAAAGAAAAGAAAAGAAAAATATTAGAAATTATTTTAATCAGA  444

seq1  ATGTCAATGGATACATAAAATGTTTGTCTTAGGGGTATTGAGGATGAGAA  481
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGTCAATGGATACATAAAATGTTTGTTTTAGGGGTATTGAGGATGAGAA  494

seq1  TGTGGGAGTGGGTAGGTTGGTGAAGAAACACCCTCCTAGAAGCAGTGGGA  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGTGGGTAGGTTGGTGAAGAAACACCCTCCTAGAAGCAGTGGGA  544

seq1  AGGAGGATGAATAGGGGCTTTCTTGGAGGGGGAAACCAGGAAAGGGGATA  581
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGGAGGATGAATAGGGGCTTTTTTGGAGGGGGAAACCAGGAAAGGGGATA  594

seq1  ACATTTGAAATGTGAATAAAGGAAATATCCAGTAAAAAAAAAAAAAAAAA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGAAATGTGAATAAAGGAAATATCCAGTAAAAAAAAAAAAAAAAA  644

seq1  AAAAAAAAAAAAAAAGAAAAATAAAAAAGAAAAAGAAAAACAAAAGGGAC  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGAAAAATAAAAAAGAAAAAGAAAAACAAAAGGGAC  694

seq1  AGAGCATCACTAATGGATTGAAACTTCTCAGAGATCACAGGGGAAAAAGT  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCATCACTAATGGATTGAAACTTCTCAGAGATCACAGGGGAAAAAGT  744

seq1  AAAAAGAAAATATTTCTTTGAAATTTGGCTCTGCAAAAAAAAAAAATCTA  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAATATTTCTTTGAAATTTGGCTCTGCAAAAAAAAAAAATCTA  794

seq1  TGAAGGAACATAGGGAATGTTCAGAGATGAAGAATTTACAATATATATAG  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGAACATAGGGAATGTTCAGAGATGAAGAATTTACAATATATATAG  844

seq1  GGAATGAACAACTCTAATTTCAATAAAAATAGGGGAAAAAGCTTGAATGT  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAACAACTCTAATTTCAATAAAAATAGGGGAAAAAGCTTGAATGT  894

seq1  AGATTACTTGGGTCATTGATTAGTGAGACAAGAAAAACATCAAATATGTT  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACTTGGGTCATTGATTAGTGAGACAAGAAAAACATCAAATATGTT  944

seq1  CATTAATATAAACGAATGAGTTGCAAGTAAGTAAAAATGTAATGGAACAG  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATATAAACGAATGAGTTGCAAGTAAGTAAAAATGTAATGGAACAG  994

seq1  TCAATGAAGTATCAAACATATATTCAATAAAACAATGACAATATTTTATA  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGAAGTATCAAACATATATTCAATAAAACAATGACAATATTTTATA  1044

seq1  TTGATTCACATAAGTCCTTGACTTTATCAATAACTAAAAATGACAAATGG  1081
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCACATAAGTCCTTGACTTTATCAATAACTAAAAATGACAAATGG  1094

seq1  AATAAACTACAAAAGAAAAAAAGAGTTAACACCAAGAATTAGATATGTGC  1131
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTACAAAAGAAAAAAAGAGTTAACACCAAGAATTAGATATGTGC  1144

seq1  ACAGATTTGCAGAAATTATGAGTATATGCAAAATCTTTGTGAATTC  1177
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTTGCAGAAATTATGAGTATATGCAAAATCTTTGTGAATTC  1190


seq1: chr14_83625248_83626021
seq2: B6Ng01-213E13.g_64_837

seq1  GAATTCATAAACGGAGGTCCTATGTTCCTGTTCCATTCGTCTTCTTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAACGGAGGTCCTATGTTCCTGTTCCATTCGTCTTCTTCCCT  50

seq1  GGGCTTACTGTCCATATTTCCTTCTACATTCCATTCTTGTACTAAAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTACTGTCCATATTTCCTTCTACATTCCATTCTTGTACTAAAGGCT  100

seq1  GCCTTTTTCTTCCTTATTAAATCCTTTTTATCAGCATGACTGAGAAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTCTTCCTTATTAAATCCTTTTTATCAGCATGACTGAGAAGGCT  150

seq1  TTTATTTCTTTTACTTTACTGGAAAGAATTTTCATTTCTCAGTGTCATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTTTTACTTTACTGGAAAGAATTTTCATTTCTCAGTGTCATAA  200

seq1  CTGCCACGTCTTTTTACTCAGGAACTATTCATGCTTTATACATGTACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACGTCTTTTTACTCAGGAACTATTCATGCTTTATACATGTACTTA  250

seq1  GTACTGCATAATAATTCCACACTAAGCATGTTATCCATAAATAAACAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGCATAATAATTCCACACTAAGCATGTTATCCATAAATAAACAAAC  300

seq1  TCAAAGAAAAAAATCACATGATCATCTCCTTAGATGCAGAAAAATAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAAAAATCACATGATCATCTCCTTAGATGCAGAAAAATAATTT  350

seq1  GACAAAATATAACACCCCTTCATGTTAAAAGTATTGGAGAGATCAGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAATATAACACCCCTTCATGTTAAAAGTATTGGAGAGATCAGGAAT  400

seq1  TCAAGGCCCATACCTAAATATAATAAAAGTAATTTACTGCAAACTAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCCATACCTAAATATAATAAAAGTAATTTACTGCAAACTAACAG  450

seq1  ACAACATCAAATTAAATGGAGAGATACTTGAAGCAATACCACTGAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATCAAATTAAATGGAGAGATACTTGAAGCAATACCACTGAACTCA  500

seq1  GGGACAAGACAAGGATGCTCACTCTCCCCATTACTATTCAAATATAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAAGACAAGGATGCTCACTCTCCCCATTACTATTCAAATATAGTAC  550

seq1  TCACAAGTGTTAGCTAAAAGTATAAGACAACAAAAAAGAGATCAAGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGTGTTAGCTAAAAGTATAAGACAACAAAAAAGAGATCAAGGGGA  600

seq1  TACAAATTGATAAAGAAGAAATAAAGGTATCAGTATTTGCAGATGATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTGATAAAGAAGAAATAAAGGTATCAGTATTTGCAGATGATATG  650

seq1  ATAGTAAAATGAAGCAAACTCAAAAATTCTATAAGAGAAGTTCTCCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAAATGAAGCAAACTCAAAAATTCTATAAGAGAAGTTCTCCAGCT  700

seq1  TATAAACAACTTCATCAAAGTGGCCAGATGTAAAATTAATTCAAATACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACAACTTCATCAAAGTGGCCAGATGTAAAATTAATTCAAATACAT  750

seq1  CAGTAACCTTCCTTATACAAAGGA  774
      ||||||||||||||||||||||||
seq2  CAGTAACCTTCCTTATACAAAGGA  774


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