BAC Information

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BAC

Clone NameB6Ng01-216E07
Chromosome14 (Build37)
Map Location 11,249,046 - 11,349,389
singlet/doubletdoublet
Overlap geneFhit
Upstream geneLOC100042415
Downstream geneLOC100041974, LOC667030, EG382843, LOC100042427, LOC667059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216E07.bB6Ng01-216E07.g
ACCGA033003GA033004
length1,2081,117
definitionB6Ng01-216E07.b B6Ng01-216E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,249,046 - 11,250,251)(11,348,269 - 11,349,389)
sequence
gaattctctcctagttcattaatactaccaagcacacatgtttgatgcaa
gaatctgccaacttaagaagaactgaccataagtctatcaactttcccat
tacagctaggggcgaaggagcaccagaacttcttcgaagatctctgtacg
aatatttaaggcagctaatatacagaggctcacacaaaacagagcagaga
catgtgctcgcagcgatttaaagatcacaattctatctttagcaataagg
acattaaaatagtgcttgtgctcatcttatttgtacaggaaggtttaaaa
agaaacagtgctgagaaatgaaagatcagcagatcactaataactgtagt
ttcctgaacaattaaagaaattcccaaaatggaaacccactcaggaagtg
acaaatatttctgatttttacggaaagactaaaagggcatttttatctat
agtatctattgggtgtgaaccacagttaaggaaagaagctattttttatt
atttttcatttatttcaggagcaaacatggttctggtctgaaacaagaaa
agtgaacatttctcataggaaatggtaaaagttgccttaaaaagcatttg
tcggggttttctctcctatctgctggggctgaggcagttccctttgtagc
aaacttttagtttgtaatgtgtcagcagaaatgtcctttaagttacctcc
tctaattctttacaaatacactttggaaggctgtcccccatgcatcatcc
taacattgtttggtcctgatagcattccgtgtgtgatgcttctggttgga
aaaatctgttccatgtaataactgattcaataaactgttgacaaatggtt
tgtataatacagtatggccagtgagcaaggttcgtctccgccattacaca
ctgtattcaaagcatccacaaactctgccatggccctccctcttatgcta
gaggtgcaagctaaagctccttgcaccattctgaatagcaatccacagat
caatacactgtctgctgaaaacaacaggacataacaaatgaatgattttt
atttacaataaaggccccagtcatcgaatggattccgctcatgtcaaatt
catttttcatgcccactcaagaaggagaaggcagaacaaagcataacaca
atggatgttcaagtagagtacctaacctgttaatggcaccaattaattaa
gcaatgaa

gaattcatccttttttaagtagggggtaataggacacaagaccacaaact
gctattctattactgttactgtcatttgggtcactattctccttcacagg
aaataaaataaaaatctgtgaaaagtgttttaaaccagtgcaatcttctg
gaggcggatttatgcctttccagtctgtgatccaaaggtcacagtactga
atttaccaaatttcattagtttcaagataacatgaattataaaatatact
aataatttaatgagttattaggaaaaattaaaagctctacattaagtatg
cacattgctgaaaaagagctctcatttatagaacattaaaatgtgaagag
aaatgataattctgtgatttaaaatttcacttactttcattacttgagaa
ttatcttgtttctctagtgttttactctttagacatctcaatattacatg
gtggtttatcagttcatgtgactctgacattgcaaagccaattaaggaca
tggatcatttgtgatgtgattttttttcatttttatattcctttattcat
taaccaatggagggaagaagtagaaaagaaaaaaaaaaagaactaaatct
gagttctggttctggtgtagatggtgaccttgtggtatttttgtgatgat
atggcatcaaattcctgtttggtcctgttttcttcagggggattctgata
gatgaaaaggaaaacatgaagaataaaaactccatacagacagctaaagc
tgagcttctccttggatctgtcaggatctttacctgtctttggacttccc
tactgaaatatactgaatgagttggaccacacctctgatgaaagcaggca
gtggttaccattgactgcatgaaaggtatcttccaaagcctaggtctaca
gcagaaacatcagattctttacagcccaaattacgagtcacttcctacct
gccactccaggacacctacctgtgctgtagtagagctgtgcatgcacacc
tgacatgtgtgatcatagagcacacgaggaaatagaacggagaactgaat
gatgtccttctctgagccaagcagtcagtcaggcttgcctcagttgactg
cattctatttaagcgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_11249046_11250251
seq2: B6Ng01-216E07.b_43_1250

seq1  GAATTCTCTCCTAGTTCATTAATACTACCAAGCACACATGTTTGATGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTAGTTCATTAATACTACCAAGCACACATGTTTGATGCAA  50

seq1  GAATCTGCCAACTTAAGAAGAACTGACCATAAGTCTATCAACTTTCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGCCAACTTAAGAAGAACTGACCATAAGTCTATCAACTTTCCCAT  100

seq1  TACAGCTAGGGGCGAAGGAGCACCAGAACTTCTTCGAAGATCTCTGTACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTAGGGGCGAAGGAGCACCAGAACTTCTTCGAAGATCTCTGTACG  150

seq1  AATATTTAAGGCAGCTAATATACAGAGGCTCACACAAAACAGAGCAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAGGCAGCTAATATACAGAGGCTCACACAAAACAGAGCAGAGA  200

seq1  CATGTGCTCGCAGCGATTTAAAGATCACAATTCTATCTTTAGCAATAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCTCGCAGCGATTTAAAGATCACAATTCTATCTTTAGCAATAAGG  250

seq1  ACATTAAAATAGTGCTTGTGCTCATCTTATTTGTACAGGAAGGTTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAAATAGTGCTTGTGCTCATCTTATTTGTACAGGAAGGTTTAAAA  300

seq1  AGAAACAGTGCTGAGAAATGAAAGATCAGCAGATCACTAATAACTGTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGTGCTGAGAAATGAAAGATCAGCAGATCACTAATAACTGTAGT  350

seq1  TTCCTGAACAATTAAAGAAATTCCCAAAATGGAAACCCACTCAGGAAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGAACAATTAAAGAAATTCCCAAAATGGAAACCCACTCAGGAAGTG  400

seq1  ACAAATATTTCTGATTTTTACGGAAAGACTAAAAGGGCATTTTTATCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATTTCTGATTTTTACGGAAAGACTAAAAGGGCATTTTTATCTAT  450

seq1  AGTATCTATTGGGTGTGAACCACAGTTAAGGAAAGAAGCTATTTTTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTATTGGGTGTGAACCACAGTTAAGGAAAGAAGCTATTTTTTATT  500

seq1  ATTTTTCATTTATTTCAGGAGCAAACATGGTTCTGGTCTGAAACAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATTTATTTCAGGAGCAAACATGGTTCTGGTCTGAAACAAGAAA  550

seq1  AGTGAACATTTCTCATAGGAAATGGTAAAAGTTGCCTTAAAAAGCATTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAACATTTCTCATAGGAAATGGTAAAAGTTGCCTTAAAAAGCATTTG  600

seq1  TCGGGGTTTTCTCTCCTATCTGCTGGGGCTGAGGCAGTTCCCTTTGTAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGTTTTCTCTCCTATCTGCTGGGGCTGAGGCAGTTCCCTTTGTAGC  650

seq1  AAACTTTTAGTTTGTAATGTGTCAGCAGAAATGTCCTTTAAGTTACCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTAGTTTGTAATGTGTCAGCAGAAATGTCCTTTAAGTTACCTCC  700

seq1  TCTAATTCTTTACAAATACACTTTGGAAGGCTGTCCCCCATGCATCATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATTCTTTACAAATACACTTTGGAAGGCTGTCCCCCATGCATCATCC  750

seq1  TAACATTGTTTGGTCCTGATAGCATTCCGTGTGTGATGCTTCTGGTTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTGTTTGGTCCTGATAGCATTCCGTGTGTGATGCTTCTGGTTGGA  800

seq1  AAAATCTGTTCCATGTAATAACTGATTCAATAAACTGTTGACAAATGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTGTTCCATGTAATAACTGATTCAATAAACTGTTGACAAATGGTT  850

seq1  TGTATAATACAGTATGGCCAGTGAGCAAGGTTCGTCTCCGCCATTACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATACAGTATGGCCAGTGAGCAAGGTTCGTCTCCGCCATTACACA  900

seq1  CTGTATTCAAAGCATCCACAAACTCTGCCATGGCCCTCCCTCTTATGCTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCAAAGCATCCACAAACTCTGCCATGGCCCTCCCTCTTATGCTA  950

seq1  GAGGTGCAAGCTAAAGCTCCTTGCACCATTCTGAATAGCAATCCACAGAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCAAGCTAAAGCTCCTTGCACCATTCTGAATAGCAATCCACAGAT  1000

seq1  CAATACACTGTCTGCTGAAAACAACAAGACATAACAAATGAATGA-TTTT  1049
      |||||||||||||||||||||||||| |||||||||||||||||| ||||
seq2  CAATACACTGTCTGCTGAAAACAACAGGACATAACAAATGAATGATTTTT  1050

seq1  ATTTACAATAAAAGCCCCAGTCATCGAATGGATTCCGCTCATGTTCAAAT  1099
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  ATTTACAATAAAGGCCCCAGTCATCGAATGGATTCCGCTCATG-TCAAAT  1099

seq1  TCATTTTTCATGCCCAACTCAAG-AGGAG-AGGCAG-ACAAAGCATAACA  1146
      ||||||||||||||| ||||||| ||||| |||||| |||||||||||||
seq2  TCATTTTTCATGCCC-ACTCAAGAAGGAGAAGGCAGAACAAAGCATAACA  1148

seq1  CAAGGGGAGGGGCAGGGAGAGGTACTAA-CTG-TAATGGCACCAATTTAT  1194
      |||  ||| |  || | ||||   |||| ||| |||||||||||| ||| 
seq2  CAA-TGGATGTTCAAGTAGAGTACCTAACCTGTTAATGGCACCAA-TTAA  1196

seq1  TTAAGCAATGAA  1206
      ||||||||||||
seq2  TTAAGCAATGAA  1208


seq1: chr14_11348269_11349389
seq2: B6Ng01-216E07.g_65_1181 (reverse)

seq1  TGCGCTT-TATAG-ATGCAGCTCAACTGA-GCAAGCCTGAACTGACTGGC  47
      |||||||  |||| |||||| |||||||| ||||||||| ||||||| ||
seq2  TGCGCTTAAATAGAATGCAG-TCAACTGAGGCAAGCCTG-ACTGACT-GC  47

seq1  TTGGGCTCAGAGAGGAACATCATTCAGTTCTCCGGTTCTATTTCCTCGTG  97
      || |||||||||| | ||||||||||||||||| ||||||||||||||||
seq2  TT-GGCTCAGAGAAGGACATCATTCAGTTCTCC-GTTCTATTTCCTCGTG  95

seq1  TGCTCTATGATCACACATGTCAGGTGTGCCCTGCACCAGCCTCTACTACA  147
      |||||||||||||||||||||||||||| | |||| ||| ||||||||||
seq2  TGCTCTATGATCACACATGTCAGGTGTG-CATGCA-CAG-CTCTACTACA  142

seq1  GCACAGGTAGGTGTCCCTGGAGTGGCAGGTAGGAGGTGACTCGTAATTTG  197
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  GCACAGGTAGGTGT-CCTGGAGTGGCAGGTAGGAAGTGACTCGTAATTTG  191

seq1  GGCTGTAAAGAATCTGATG-TTCTGCTGTAGACCTAGGCTTTGGAAGATA  246
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGCTGTAAAGAATCTGATGTTTCTGCTGTAGACCTAGGCTTTGGAAGATA  241

seq1  CC-TTCATGCAGTCAATGGTAACCACTGCCTGCTTTCATCAGAGGTGTGG  295
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATGCAGTCAATGGTAACCACTGCCTGCTTTCATCAGAGGTGTGG  291

seq1  TCCAACTCATTCAGTATATTTCAGTAGGGAAGTCCAAAGACAGGTAAAGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTCATTCAGTATATTTCAGTAGGGAAGTCCAAAGACAGGTAAAGA  341

seq1  TCCTGACAGATCCAAGGAGAAGCTCAGCTTTAGCTGTCTGTATGGAGTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGACAGATCCAAGGAGAAGCTCAGCTTTAGCTGTCTGTATGGAGTTT  391

seq1  TTATTCTTCATGTTTTCCTTTTCATCTATCAGAATCCCCCTGAAGAAAAC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTCATGTTTTCCTTTTCATCTATCAGAATCCCCCTGAAGAAAAC  441

seq1  AGGACCAAACAGGAATTTGATGCCATATCATCACAAAAATACCACAAGGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCAAACAGGAATTTGATGCCATATCATCACAAAAATACCACAAGGT  491

seq1  CACCATCTACACCAGAACCAGAACTCAGATTTAGTTCTTTTTTTTTTTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCTACACCAGAACCAGAACTCAGATTTAGTTCTTTTTTTTTTTCT  541

seq1  TTTCTACTTCTTCCCTCCATTGGTTAATGAATAAAGGAATATAAAAATGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTTCTTCCCTCCATTGGTTAATGAATAAAGGAATATAAAAATGA  591

seq1  AAAAAAATCACATCACAAATGATCCATGTCCTTAATTGGCTTTGCAATGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCACATCACAAATGATCCATGTCCTTAATTGGCTTTGCAATGT  641

seq1  CAGAGTCACATGAACTGATAAACCACCATGTAATATTGAGATGTCTAAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCACATGAACTGATAAACCACCATGTAATATTGAGATGTCTAAAG  691

seq1  AGTAAAACACTAGAGAAACAAGATAATTCTCAAGTAATGAAAGTAAGTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACACTAGAGAAACAAGATAATTCTCAAGTAATGAAAGTAAGTGA  741

seq1  AATTTTAAATCACAGAATTATCATTTCTCTTCACATTTTAATGTTCTATA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAATCACAGAATTATCATTTCTCTTCACATTTTAATGTTCTATA  791

seq1  AATGAGAGCTCTTTTTCAGCAATGTGCATACTTAATGTAGAGCTTTTAAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGCTCTTTTTCAGCAATGTGCATACTTAATGTAGAGCTTTTAAT  841

seq1  TTTTCCTAATAACTCATTAAATTATTAGTATATTTTATAATTCATGTTAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTAATAACTCATTAAATTATTAGTATATTTTATAATTCATGTTAT  891

seq1  CTTGAAACTAATGAAATTTGGTAAATTCAGTACTGTGACCTTTGGATCAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACTAATGAAATTTGGTAAATTCAGTACTGTGACCTTTGGATCAC  941

seq1  AGACTGGAAAGGCATAAATCCGCCTCCAGAAGATTGCACTGGTTTAAAAC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAAAGGCATAAATCCGCCTCCAGAAGATTGCACTGGTTTAAAAC  991

seq1  ACTTTTCACAGATTTTTATTTTATTTCCTGTGAAGGAGAATAGTGACCCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCACAGATTTTTATTTTATTTCCTGTGAAGGAGAATAGTGACCCA  1041

seq1  AATGACAGTAACAGTAATAGAATAGCAGTTTGTGGTCTTGTGTCCTATTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAGTAACAGTAATAGAATAGCAGTTTGTGGTCTTGTGTCCTATTA  1091

seq1  CCCCCTACTTAAAAAAGGATGAATTC  1121
      ||||||||||||||||||||||||||
seq2  CCCCCTACTTAAAAAAGGATGAATTC  1117


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