BAC Information

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BAC

Clone NameB6Ng01-217H08
Chromosome14 (Build37)
Map Location 102,879,353 - 102,916,723
singlet/doubletdoublet
Overlap geneLOC669278
Upstream geneTbc1d4, Commd6, Uchl3, Lmo7, LOC100043795, LOC545567
Downstream geneKctd12, LOC668699, Irg1, Cln5, Fbxl3, LOC100043441, Phr1, LOC100043797, Scel
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217H08.bB6Ng01-217H08.g
ACCGA033863GA033864
length1,0401,194
definitionB6Ng01-217H08.b B6Ng01-217H08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,879,353 - 102,880,391)(102,915,552 - 102,916,723)
sequence
gaattccctgtttgagttcctaccctaattgcttccaatgatgaacaagg
acatgaagatgtgaatgaaataaatcttttatttaccttttgatcatgat
gtttcatcacagtgatagtaacccgtactaatatacccttttgcctaata
atgtgttataagaaaaaattaaatttaatatatgaaaagaatcagaattt
gacccaatctcttcagaactctttgaccaccagggtctttctgaaggttt
tagagattatgtgttggtataatttgagacaggaaaaggttcactgcaac
tttaagatgggaagaaataataaaaagactctttggtttcttatactaaa
tattaattcagagtcatataagacatgtaaagtaacagtctaaaaatgat
aattttaacaaatcatatcactatactgtatatgagtataaataaaatga
actattagcctcagttttacttcttgtacataatgtgaacaatgaaataa
tcaataaagaaaaatacttcttaaaaaaggaggctgaaagccctttgtct
tagttcccagcttccatggtcacttcctgggaacacaactagccaaattg
gccaggggatcagacatgcaatcttgactctatctcttctccttcgaatc
cattctcccagtcttatgcccagatttgtaccagaccatctcctatgacc
tctccttcctctctgaccctatttccagaggtctacaaagatcctaattg
aaaaccagcttttttcccctgcaatggaccttcttctcaacaccccacct
ctttctaacccatccccagtctttggtttcagccttatacctagaaagga
gctagaccccaataatcaaaactggcaggatctcagaagcattctttacc
atgtaacccacagccacacactctcccggagcaccagagagggcaaagaa
accaaagatcaaacacaaacccacaaaacacaagtctaatatcacatcca
tattacatcatctcaaatccagatgctaatgccagtgtaa

gaattctgaggcaaaatgccttaattgtatctactggtagcaatacctcc
tccttttacaatgtctcctttagtggatccctaagttggacacattaatt
ttagtactaaaatcttcacaagcctttattctgatgtagacactggaaat
taggagaattaatttatatcgtcgaaaatcacatcctttgcaatcaacct
agtaagaatgaagtctcaggacttcttttaaagtcattattcttatttgt
aatacacctccttaaaacacattaaacctatttgtaaagtgcatcttgaa
aatataacctataacacaacagggatttacaaacacacacacacacacac
acacacacacacacacactcacacacacagaagtgtcagagcaacagctt
ggttaatattgtgggatattttgctgcagtgacagtaacactatttaaca
aaataatgcattgtctttagctcagtgaactataatggagaacattgtta
ggagctgcagtgatgtcttatagtactgtgacttctgccctgccccctac
tgtgctattctttttgctgggagctgacagaagcattcaacaaaatgagg
aaatagtggcgggcacagctgaatgaaattttgaaacaaacagccgaaga
taagtgtgtgccacatgagaacagctcttaattgttctgtgataattcag
tcaaaatataatgatgttgttaggaagaatgggttagtttcttgcggatt
aagagaaaaccattttgtagaagatgaaagggcatctagcatttgaatag
acagagggaagagctgcaagaaacatgaaatttactttttttgcctgata
agacattttatctgtgtttctctatcctcatgctaaatgaggtctagaag
ataagagtcctttgaaagcagaaatgggcattagtttggaatttcttgtt
ctaggccactcagaagaccagacataaatcagcattggcccatgaacact
tgattactaatgaagaagacttctgcaaaattatcttaatctaggctttg
aacttttctctctctctggtcctcctctccctctggctctgcctgtccct
gactgtcgactgggctggctgacgaccctcctcctcgccttctctaaagg
ccactagagcatcttgcccttaaaggctaggctgcacctttata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102879353_102880391
seq2: B6Ng01-217H08.b_47_1078

seq1  GAATTCCCTGTTTGAGTTCCTACCCTAATTGCTTCCAATGATGAACAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTTTGAGTTCCTACCCTAATTGCTTCCAATGATGAACAAGG  50

seq1  ACATGAAGATGTGAATGAAATAAATCTTTTATTTACCTTTTGATCATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAAGATGTGAATGAAATAAATCTTTTATTTACCTTTTGATCATGAT  100

seq1  GTTTCATCACAGTGATAGTAACCCGTACTAATATACCCTTTTGCCTAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATCACAGTGATAGTAACCCGTACTAATATACCCTTTTGCCTAATA  150

seq1  ATGTGTTATAAGAAAAAATTAAATTTAATATATGAAAAGAATCAGAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTATAAGAAAAAATTAAATTTAATATATGAAAAGAATCAGAATTT  200

seq1  GACCCAATCTCTTCAGAACTCTTTGACCACCAGGGTCTTTCTGAAGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAATCTCTTCAGAACTCTTTGACCACCAGGGTCTTTCTGAAGGTTT  250

seq1  TAGAGATTATGTGTTGGTATAATTTGAGACAGGAAAAGGTTCACTGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTATGTGTTGGTATAATTTGAGACAGGAAAAGGTTCACTGCAAC  300

seq1  TTTAAGATGGGAAGAAATAATAAAAAGACTCTTTGGTTTCTTATACTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGATGGGAAGAAATAATAAAAAGACTCTTTGGTTTCTTATACTAAA  350

seq1  TATTAATTCAGAGTCATATAAGACATGTAAAGTAACAGTCTAAAAATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTCAGAGTCATATAAGACATGTAAAGTAACAGTCTAAAAATGAT  400

seq1  AATTTTAACAAATCATATCACTATACTGTATATGAGTATAAATAAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAACAAATCATATCACTATACTGTATATGAGTATAAATAAAATGA  450

seq1  ACTATTAGCCTCAGTTTTACTTCTTGTACATAATGTGAACAATGAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTAGCCTCAGTTTTACTTCTTGTACATAATGTGAACAATGAAATAA  500

seq1  TCAATAAAGAAAAATACTTCTTAAAAAAGGAGGCTGAAAGCCCTTTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAAGAAAAATACTTCTTAAAAAAGGAGGCTGAAAGCCCTTTGTCT  550

seq1  TAGTTCCCAGCTTCCATGGTCACTTCCTGGGAACACAACTAGCCAAATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCCCAGCTTCCATGGTCACTTCCTGGGAACACAACTAGCCAAATTG  600

seq1  GCCAGGGGATCAGACATGCAATCTTGACTCTATCTCTTCTCCTTCGAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGGATCAGACATGCAATCTTGACTCTATCTCTTCTCCTTCGAATC  650

seq1  CATTCTCCCAGTCTTATGCCCAGATTTGTACCAGACCATCTCCTATGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCCAGTCTTATGCCCAGATTTGTACCAGACCATCTCCTATGACC  700

seq1  TCTCCTTCCTCTCTGACCCTATTTCCAGAGGTCTACAAAGATCCTAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCCTCTCTGACCCTATTTCCAGAGGTCTACAAAGATCCTAATTG  750

seq1  AAAACCAGCTTTTTTCCCCTGCAATGGACCTTCTTCTCAACACCCCACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGCTTTTTTCCCCTGCAATGGACCTTCTTCTCAACACCCCACCT  800

seq1  CTTTCTAACCCATCCCCAGTCTTTGGTTTCAGCCTTATACCTAGAAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAACCCATCCCCAGTCTTTGGTTTCAGCCTTATACCTAGAAAGGA  850

seq1  GCTAGACCCCAATAATCAAAACTGGCAGGATCTCAGAAGCATTCTTTACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACCCCAATAATCAAAACTGGCAGGATCTCAGAAGCATTCTTTACC  900

seq1  ATGTAACCCACAGCCACACACTCT-CCGGAGCACCAGAGAGGGCAAAAGA  949
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  ATGTAACCCACAGCCACACACTCTCCCGGAGCACCAGAGAGGGC-AAAGA  949

seq1  AACCAAAGAATCAAACACAAACCCACAAAACACAAGTCTAAATATCAACA  999
      |||||||| |||||||||||||||||||||||||||||| |||||| |||
seq2  AACCAAAG-ATCAAACACAAACCCACAAAACACAAGTCT-AATATC-ACA  996

seq1  TCCATAATTACAATCATCTCAAATCCAGATGCTTAAATGC  1039
      ||||| ||||| |||||||||||||||||||||  |||||
seq2  TCCAT-ATTAC-ATCATCTCAAATCCAGATGCT--AATGC  1032


seq1: chr14_102915552_102916723
seq2: B6Ng01-217H08.g_65_1258 (reverse)

seq1  TATAAA-GTGCAGCCTTGGCTTTA--GGCAAGATGCCCTGGGTGCTTTTA  47
      |||||| ||||||||| | |||||  |||||||||| || |  || ||| 
seq2  TATAAAGGTGCAGCCTAGCCTTTAAGGGCAAGATGCTCTAGTGGCCTTT-  49

seq1  AGAGAGAGAGAGAGAGAGAGACAGACAGACAG-ACAGACAGACAGACAGA  96
      |||||  | |||   ||| | | | ||| |||  ||| | ||||| ||| 
seq2  AGAGAAGGCGAGGAGGAGGGTC-GTCAGCCAGCCCAGTC-GACAGTCAGG  97

seq1  GACAGACAGAGACAGAGGGAGA-GAG--ACAGAGAGAGAGAAAAG-TCAA  142
      ||||| ||||| |||||||||| |||   |||||||||||||||| ||||
seq2  GACAGGCAGAGCCAGAGGGAGAGGAGGACCAGAGAGAGAGAAAAGTTCAA  147

seq1  AG-CTAGA-TAAGATAATTTTTGCAGAAGTC-TCTTCATTAGTAATC-AG  188
      || ||||| |||||||| ||||||||||||| ||||||||||||||| ||
seq2  AGCCTAGATTAAGATAA-TTTTGCAGAAGTCTTCTTCATTAGTAATCAAG  196

seq1  TG-TCATGG--CAATGCTGATTTATGTCT-GTCTTCTGAGTGG-CTAGAA  233
      || ||||||  |||||||||||||||||| ||||||||||||| ||||||
seq2  TGTTCATGGGCCAATGCTGATTTATGTCTGGTCTTCTGAGTGGCCTAGAA  246

seq1  CA--GAATTCCAAACTAATG-CCATTTCTGCTTTCAAAGGACTC-TATCT  279
      ||   ||||||||||||||| ||||||||||||||||||||||| |||||
seq2  CAAGAAATTCCAAACTAATGCCCATTTCTGCTTTCAAAGGACTCTTATCT  296

seq1  TCTAGACCTCATTTAGCATGAGGATAGAGAAACACAGAT-AAATGTCTTA  328
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTAGACCTCATTTAGCATGAGGATAGAGAAACACAGATAAAATGTCTTA  346

seq1  TCAGGC-AAAAAAGT-AATTTCATG-TTCTTGCAGCTCTTCCCTCTGTCT  375
      |||||| |||||||| ||||||||| ||||||||||||||||||||||||
seq2  TCAGGCAAAAAAAGTAAATTTCATGTTTCTTGCAGCTCTTCCCTCTGTCT  396

seq1  ATTCAAATGCTAGATGCCCTTTCATCTTCTAC-AAATGGTTTTCTCTTAA  424
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATTCAAATGCTAGATGCCCTTTCATCTTCTACAAAATGGTTTTCTCTTAA  446

seq1  TCCGCAAGAAACTAACCCATTCTTCCTAACAACATCATTATATTTTGACT  474
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCAAGAAACTAACCCATTCTTCCTAACAACATCATTATATTTTGACT  496

seq1  GAATTATCACAGAACAATTAAGAGCTGTTCTCATGTGGCACACACTTATC  524
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCACAGAACAATTAAGAGCTGTTCTCATGTGGCACACACTTATC  546

seq1  TTCGGCTGTTTGTTTCAAAATTTCATTCAGCTGTGCCCGCCACTATTTCC  574
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCTGTTTGTTTCAAAATTTCATTCAGCTGTGCCCGCCACTATTTCC  596

seq1  TCATTTTGTTGAATGCTTCTGTCAGCTCCCAGCAAAAAGAATAGCACAGT  624
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGTTGAATGCTTCTGTCAGCTCCCAGCAAAAAGAATAGCACAGT  646

seq1  AGGGGGCAGGGCAGAAGTCACAGTACTATAAGACATCACTGCAGCTCCTA  674
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCAGGGCAGAAGTCACAGTACTATAAGACATCACTGCAGCTCCTA  696

seq1  ACAATGTTCTCCATTATAGTTCACTGAGCTAAAGACAATGCATTATTTTG  724
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTTCTCCATTATAGTTCACTGAGCTAAAGACAATGCATTATTTTG  746

seq1  TTAAATAGTGTTACTGTCACTGCAGCAAAATATCCCACAATATTAACCAA  774
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAGTGTTACTGTCACTGCAGCAAAATATCCCACAATATTAACCAA  796

seq1  GCTGTTGCTCTGACACTTCTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGT  824
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGCTCTGACACTTCTGTGTGTGTGAGTGTGTGTGTGTGTGTGTGT  846

seq1  GTGTGTGTGTGTGTGTTTGTAAATCCCTGTTGTGTTATAGGTTATATTTT  874
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTTTGTAAATCCCTGTTGTGTTATAGGTTATATTTT  896

seq1  CAAGATGCACTTTACAAATAGGTTTAATGTGTTTTAAGGAGGTGTATTAC  924
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCACTTTACAAATAGGTTTAATGTGTTTTAAGGAGGTGTATTAC  946

seq1  AAATAAGAATAATGACTTTAAAAGAAGTCCTGAGACTTCATTCTTACTAG  974
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAATAATGACTTTAAAAGAAGTCCTGAGACTTCATTCTTACTAG  996

seq1  GTTGATTGCAAAGGATGTGATTTTCGACGATATAAATTAATTCTCCTAAT  1024
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTGCAAAGGATGTGATTTTCGACGATATAAATTAATTCTCCTAAT  1046

seq1  TTCCAGTGTCTACATCAGAATAAAGGCTTGTGAAGATTTTAGTACTAAAA  1074
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGTCTACATCAGAATAAAGGCTTGTGAAGATTTTAGTACTAAAA  1096

seq1  TTAATGTGTCCAACTTAGGGATCCACTAAAGGAGACATTGTAAAAGGAGG  1124
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGTGTCCAACTTAGGGATCCACTAAAGGAGACATTGTAAAAGGAGG  1146

seq1  AGGTATTGCTACCAGTAGATACAATTAAGGCATTTTGCCTCAGAATTC  1172
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATTGCTACCAGTAGATACAATTAAGGCATTTTGCCTCAGAATTC  1194


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