BAC Information

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BAC

Clone NameB6Ng01-218F04
Chromosome14 (Build37)
Map Location 65,137,696 - 65,273,518
singlet/doubletdoublet
Overlap geneKif13b
Upstream geneMtmr9, Xkr6, LOC668306, 2610028A01Rik, Sox7, 4930578I06Rik, Rp1l1, 4933401F05Rik, 1700007N14Rik, 1700049K14Rik, Msra
Downstream geneHmbox1, LOC100043657, D14Ertd231e, Extl3, Fzd3, LOC668286, Fbxo16, Zfp395, Pnoc, Elp3, Gm600
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218F04.bB6Ng01-218F04.g
ACCGA034483GA034484
length1,1311,135
definitionB6Ng01-218F04.b B6Ng01-218F04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,272,408 - 65,273,518)(65,137,696 - 65,138,827)
sequence
gaattcaagatgccaactcagaaataacaagctttaagattcctctctat
tatattgcataataacctgtagatgaagaaattatctatgatgagcacta
gaaacagaagacagagtaagcaaagagactacggggcagctgccactgga
caatggggccaaactgtaaacattcattttaaagtgagttcagccaggag
tggttggtgcacccctgcaatgcactcaggaggctgagggaggaagatga
ctgcaagtcccaggccaccctggtctacacagagactgcctctaaataaa
tgaaaaaaaaaaaaaaaaataggactggggagatgcctgggtggttggtt
gaactcagatggtttaatggatgaaaaccaagtgaggaccagagttcaga
tccttagcacctaagttttaaaaagaaaagaagggtcaggtgttgtggcg
aatgcctttaatcccagcaccaaagatctgggcagaggcaggcatatttc
tatgaatctgaggccagcttggtctacataatgagttccagggctatgta
cagagacccagtctcaaaaataggaaagaaagagaaaggaaggaatacaa
ggaacagctagaaatcattcaacgaatatctcaaaactctgagcattagt
aacagccactgtcagaattacaagcatagcaaattaaagacagtagcttc
ctcccagtaagagaaaacaaggaagagtccggctctaactatctgtgcca
aaccctgctgtggtggctggttagaggcctccttcagcactgacattttc
caagggttttgcaaaaaggaaaattttaagaatgtgctgaacccttcctt
tccgaatcattcccagatatgtcggatttcattttggctgttttcttttt
ttctttagtttttttttaatcgcagtaatgatcacaatgaggtgaagtga
tctaaaattaaaagatgtctggatactcaaaaaatgggaagaacctgaaa
acttttcagaacttctaagcttacttcactcttgtttttgtgagaacctg
gaatgttaggagagcaatggagcttgaaaacttaaaaagttcccgtcttc
aggggaataagcttgcctcatagacttcagc
gaattcaccaatttggctcaactggcaagccagagagccctgggaatcct
cctgtatctgttttcccagagctgagattgtagacacattgccgtgcccg
ctttgtatgtgggtccatgagattcaaactcagttctcatgcctgggtgg
caaacacattgccaactgaatcatctccccagcccccagtatcttcttgg
tccagtcatcttctcccttggttctattcacggattctcagtccttgaga
acagacagctgccattgtaagatctacggggagccttttctctatagata
catcctctgtaataacaggaacagagcctagcctgtgagtgacaggaaac
aagctctcctccagactatttatctgaatggcttccagcaaggcacttag
agtgccctaagggatgcccaccataccctaattccatgctggccaagact
cttggatccactgtgactgagggttggggaacttacgtttccctcccctc
tcgccaatgttcacccttacacaggcctactttggggccagggggagggg
ccggacagcagctatctcaccaggaaaagcaggatcattctctgtacttc
aaattcaatcacctccggttttcagctggactgattcaaagtcaactcta
gaggggactcccacaaggctttgcacaataagaataagtgtgcccaattc
aagcccaatcatttcctaatcctttccaaatcaaggatgtttctggccca
gaggaaaccctaacaagtccttgcaagactccctcggcactcagacgccc
tctcctctgcacggactatttcatggcctcttgcctccttctgccaagcc
caagcaactggtttctgcacttcctatttagtaacagagcctgagcttaa
gagcccttcttcagtgatgggaggagaagcctcttgatctacccgtggca
aggatgcaccagcttctctgtgattgaggacagctccaaatccactggta
tcttcaagtccgaggattcattaaaggaagatggaggagctttgctgacc
tcctctgagctgccaggaaaaagagtgattgggtgaagattaccttggct
acattttctttgtccgtctgtgacaattgcctgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_65272408_65273518
seq2: B6Ng01-218F04.b_44_1174 (reverse)

seq1  GCTGAAGTCTATGAGGCAAGCTT-TTCCCCTGAAGAC-GGAACTTTTTAA  48
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  GCTGAAGTCTATGAGGCAAGCTTATTCCCCTGAAGACGGGAACTTTTTAA  50

seq1  GCTCTC-AGCT-CATTGC-CTCCTAACA-TCCAGGTTCTCACAAAA--CA  92
      | | || |||| |||||| ||||||||| |||||||||||||||||   |
seq2  GTTTTCAAGCTCCATTGCTCTCCTAACATTCCAGGTTCTCACAAAAACAA  100

seq1  GAGTG-AGT-AGCTTAGAAG-TCTG-AAAGTTTTCA-GTTC-TCCCATTT  136
      ||||| ||| |||||||||| |||| |||||||||| |||| ||||||||
seq2  GAGTGAAGTAAGCTTAGAAGTTCTGAAAAGTTTTCAGGTTCTTCCCATTT  150

seq1  TTTGAGTATCCAGACATCTTT--ATTTTAGATCACTTCACCTCATTGTGA  184
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TTTGAGTATCCAGACATCTTTTAATTTTAGATCACTTCACCTCATTGTGA  200

seq1  TCATTACTGCGATTAAAAAAAAACTAAAGAAAAAAAGAAAACAGCC-AAA  233
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCATTACTGCGATTAAAAAAAAACTAAAGAAAAAAAGAAAACAGCCAAAA  250

seq1  TGAAATCCGACATATCTGGGAATGATTCGGAAAGGAAGGGTTCAGCACAT  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCCGACATATCTGGGAATGATTCGGAAAGGAAGGGTTCAGCACAT  300

seq1  TCTTAAAA-TTTCCTTTTTGCAAAACCCTTGG-AAATGTCAGTGCTGAAG  331
      |||||||| ||||||||||||||||||||||| |||||||||||||||||
seq2  TCTTAAAATTTTCCTTTTTGCAAAACCCTTGGAAAATGTCAGTGCTGAAG  350

seq1  GAGGCCTCTAACCAGCCACCACAGCAGGGTTTGGCACAGATAGTTAGAGC  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTCTAACCAGCCACCACAGCAGGGTTTGGCACAGATAGTTAGAGC  400

seq1  CGGACTCTTCCTTGTTTTCTCTTACTGGGAGGAAGCTACTGTCTTTAATT  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTCTTCCTTGTTTTCTCTTACTGGGAGGAAGCTACTGTCTTTAATT  450

seq1  TGCTATGCTTGTAATTCTGACAGTGGCTGTTACTAATGCTCAGAGTTTTG  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGCTTGTAATTCTGACAGTGGCTGTTACTAATGCTCAGAGTTTTG  500

seq1  AGATATTCGTTGAATGATTTCTAGCTGTTCCTTGTATTCCTTCCTTTCTC  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTCGTTGAATGATTTCTAGCTGTTCCTTGTATTCCTTCCTTTCTC  550

seq1  TTTCTTTCCTATTTTTGAGACTGGGTCTCTGTACATAGCCCTGGAACTCA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCCTATTTTTGAGACTGGGTCTCTGTACATAGCCCTGGAACTCA  600

seq1  TTATGTAGACCAAGCTGGCCTCAGATTCATAGAAATATGCCTGCCTCTGC  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGACCAAGCTGGCCTCAGATTCATAGAAATATGCCTGCCTCTGC  650

seq1  CCAGATCTTTGGTGCTGGGATTAAAGGCATTCGCCACAACACCTGACCCT  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATCTTTGGTGCTGGGATTAAAGGCATTCGCCACAACACCTGACCCT  700

seq1  TCTTTTCTTTTTAAAACTTAGGTGCTAAGGATCTGAACTCTGGTCCTCAC  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTTTTAAAACTTAGGTGCTAAGGATCTGAACTCTGGTCCTCAC  750

seq1  TTGGTTTTCATCCATTAAACCATCTGAGTTCAACCAACCACCCAGGCATC  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTCATCCATTAAACCATCTGAGTTCAACCAACCACCCAGGCATC  800

seq1  TCCCCAGTCCTA-TTTTTTTTTTTTTTTTCATTTATTTAGAGGCAGTCTC  830
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGTCCTATTTTTTTTTTTTTTTTTCATTTATTTAGAGGCAGTCTC  850

seq1  TGTGTAGACCAGGGTGGCCTGGGACTTGCAGTCATCTTCCTCCCTCAGCC  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGACCAGGGTGGCCTGGGACTTGCAGTCATCTTCCTCCCTCAGCC  900

seq1  TCCTGAGTGCATTGCAGGGGTGCACCAACCACTCCTGGCTGAACTCACTT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGTGCATTGCAGGGGTGCACCAACCACTCCTGGCTGAACTCACTT  950

seq1  TAAAATGAATGTTTACAGTTTGGCCCCATTGTCCAGTGGCAGCTGCCCCG  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGAATGTTTACAGTTTGGCCCCATTGTCCAGTGGCAGCTGCCCCG  1000

seq1  TAGTCTCTTTGCTTACTCTGTCTTCTGTTTCTAGTGCTCATCATAGATAA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCTTTGCTTACTCTGTCTTCTGTTTCTAGTGCTCATCATAGATAA  1050

seq1  TTTCTTCATCTACAGGTTATTATGCAATATAATAGAGAGGAATCTTAAAG  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATCTACAGGTTATTATGCAATATAATAGAGAGGAATCTTAAAG  1100

seq1  CTTGTTATTTCTGAGTTGGCATCTTGAATTC  1111
      |||||||||||||||||||||||||||||||
seq2  CTTGTTATTTCTGAGTTGGCATCTTGAATTC  1131

seq1: chr14_65137696_65138827
seq2: B6Ng01-218F04.g_67_1201

seq1  GAATTCACCAATTTGGCTCAACTGGCAAGCCAGAGAGCCCTGGGAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAATTTGGCTCAACTGGCAAGCCAGAGAGCCCTGGGAATCCT  50

seq1  CCTGTATCTGTTTTCCCAGAGCTGAGATTGTAGACACATTGCCGTGCCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTATCTGTTTTCCCAGAGCTGAGATTGTAGACACATTGCCGTGCCCG  100

seq1  CTTTGTATGTGGGTCCATGAGATTCAAACTCAGTTCTCATGCCTGGGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATGTGGGTCCATGAGATTCAAACTCAGTTCTCATGCCTGGGTGG  150

seq1  CAAACACATTGCCAACTGAATCATCTCCCCAGCCCCCAGTATCTTCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACATTGCCAACTGAATCATCTCCCCAGCCCCCAGTATCTTCTTGG  200

seq1  TCCAGTCATCTTCTCCCTTGGTTCTATTCACGGATTCTCAGTCCTTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCATCTTCTCCCTTGGTTCTATTCACGGATTCTCAGTCCTTGAGA  250

seq1  ACAGACAGCTGCCATTGTAAGATCTACGGGGAGCCTTTTCTCTATAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGCTGCCATTGTAAGATCTACGGGGAGCCTTTTCTCTATAGATA  300

seq1  CATCCTCTGTAATAACAGGAACAGAGCCTAGCCTGTGAGTGACAGGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTGTAATAACAGGAACAGAGCCTAGCCTGTGAGTGACAGGAAAC  350

seq1  AAGCTCTCCTCCAGACTATTTATCTGAATGGCTTCCAGCAAGGCACTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTCCTCCAGACTATTTATCTGAATGGCTTCCAGCAAGGCACTTAG  400

seq1  AGTGCCCTAAGGGATGCCCACCATACCCTAATTCCATGCTGGCCAAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCCTAAGGGATGCCCACCATACCCTAATTCCATGCTGGCCAAGACT  450

seq1  CTTGGATCCACTGTGACTGAGGGTTGGGGAACTTACGTTTCCCTCCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATCCACTGTGACTGAGGGTTGGGGAACTTACGTTTCCCTCCCCTC  500

seq1  TCGCCAATGTTCACCCTTACACAGGCCTACTTTGGGGCCAGGGGGAGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCAATGTTCACCCTTACACAGGCCTACTTTGGGGCCAGGGGGAGGGG  550

seq1  CCGGACAGCAGCTATCTCACCAGGAAAAGCAGGATCATTCTCTGTACTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACAGCAGCTATCTCACCAGGAAAAGCAGGATCATTCTCTGTACTTC  600

seq1  AAATTCAATCACCTCCGGTTTTCAGCTGGACTGATTCAAAGTCAACTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAATCACCTCCGGTTTTCAGCTGGACTGATTCAAAGTCAACTCTA  650

seq1  GAGGGGACTCCCACAAGGCTTTGCACAATAAGAATAAGTGTGCCCAATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGACTCCCACAAGGCTTTGCACAATAAGAATAAGTGTGCCCAATTC  700

seq1  AAGCCCAATCATTTCCTAATCCTTTCCAAATCAAGGATGTTTCTGGCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAATCATTTCCTAATCCTTTCCAAATCAAGGATGTTTCTGGCCCA  750

seq1  GAGGAAACCCTAACAAGTCCTTGCAAGACTCCCTCGGCACTCAGACGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACCCTAACAAGTCCTTGCAAGACTCCCTCGGCACTCAGACGCCC  800

seq1  TCTCCTCTGCACGGACTATTTCATGGCCTCTTGCCTCCTTCTGCCAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTGCACGGACTATTTCATGGCCTCTTGCCTCCTTCTGCCAAGCC  850

seq1  CAAGCAACTGGTTTCTGCACTTCCTATTTAGTAACAGAGCCTGAGCTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAACTGGTTTCTGCACTTCCTATTTAGTAACAGAGCCTGAGCTTAA  900

seq1  GAGCCCTTCTTCAGTGAT-GGAGGAGAAGCCTCTTGATCTACCCGTGGCA  949
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAGCCCTTCTTCAGTGATGGGAGGAGAAGCCTCTTGATCTACCCGTGGCA  950

seq1  AGGATGCACCAGC-TCTCTGTGATTGAGGACAGCTCCAAATCCACTGGTA  998
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGATGCACCAGCTTCTCTGTGATTGAGGACAGCTCCAAATCCACTGGTA  1000

seq1  TCTTCAAGTCCGAGGATTCAATAAAGGAAGATGGAGGAGCTTTGCTGA-C  1047
      |||||||||||||||||||| ||||||||||||||||||||||||||| |
seq2  TCTTCAAGTCCGAGGATTCATTAAAGGAAGATGGAGGAGCTTTGCTGACC  1050

seq1  TCCTCTGAGCCTGCCAGGAAAAAGAAGTGAATTTGGGTGAAGATTACCTT  1097
      ||||||||| |||||||||||||| |||||  ||||||||||||||||||
seq2  TCCTCTGAG-CTGCCAGGAAAAAG-AGTGA--TTGGGTGAAGATTACCTT  1096

seq1  GGGCACA-TTTCT---TGCTGCTGTGACAAATGCCTGAC  1132
      ||  ||| |||||   | |  ||||||||| ||||||||
seq2  GGCTACATTTTCTTTGTCCGTCTGTGACAATTGCCTGAC  1135