BAC Information

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BAC

Clone NameB6Ng01-220H15
Chromosome14 (Build37)
Map Location 73,279,361 - 73,280,528
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668482, LOC675957, Fndc3a, LOC100043721
Downstream geneLOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5, Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220H15.bB6Ng01-220H15.g
ACCGA036024GA036025
length9291,147
definitionB6Ng01-220H15.b B6Ng01-220H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacaattttatgttgcctaagcatctattctgaattcatttgt
aaggaccagagagatggcccagtggttaaaatttgtactgttttgtagag
gatcagagttaggtccacagcacccatgctgggtagcttacaattgctag
taactccagcttcagttgatctaatggcaatggctttttgtgcactcatt
tacatatacctacacccccaatacataattaaactatatgtacacacaca
cacacacacacacacacacacacacacacacacacacacacacatttatt
tttttcctaccagaatcagggctcagtcagttttgaaagttagtgtttct
actgcctgtggctgcagttcagatgggtgctgcaacctcccacctcccag
tgatagctttttgaaggatggctgatacttgactgtctttactggccact
gtaccccacgtgccttgtgaagacatgcagtggtacttctggatcttgta
tctgctttacttagctccacaatgggaaacctggaccaatagaattctcc
catgagtttccctctctccctacctgtaccttctgacttgggagtgtgta
gcttccagggaagcgctgtacttgtcaggacctgtaagtaagcaaatctt
tttacttttatttcgtgtctctcctaactgttgaagaggtacttccatct
tacatttaaaaggctggaaaatgagtgtttcaggaagaaaatgttaggaa
ggaattattacaggcttctcgttgctgtgaggtcacttggaaatataggt
aaaagacagaatttgcagaagtaaacatggtcattagttctgtaatagat
tctggaaacagagaaagtaatacccaggcaatgagtatacattgctaaaa
tctctgtgtgtgtgtgtgtgtgtgtgagt
gaattccatccaaacttcaagaaatggcggggtctacctaatgcaaacaa
taagaaacaagtctaaaatccaaacagataataaaatagatttttaaaaa
attagtttagcttggacaataaataggtcaaaaatttcaggtggtcagat
gaaagaattctgtataacagtaaatctggaacacccatctgacgggcgtg
ggctttggcttcttcactgtcatagctgctatcaggaaaagcttccatgt
gtcccatcatgatacagaaagaattcctttgggaatgacacatcccccag
acctgcatcctggctcaagctctctaaataataagcagtcccaagcttcc
tgggacaatgatcctgttgtggccattaggaattcagaaatctcaacctg
cctaaaatatgaaatagttaaaaacttgaatatagagattacaaagtcct
taaagcctaatattacaatttgtgttaaatgcacgaacttgtaatagaca
cgtaagagtaaaagtacttataccaaaaggaatttcttacatgagaagtt
caaaagttagtctgatgtattttatttaagaaatatgtttgggtttgggc
ttatttaaaatggagatgaggaaagtgtacttagattataatcagtgtga
ttccttttcagataacttaaaatgtttaattcattatatttacagaagtc
tttagatagtggaggagaggtattatttcttctggttgcggtctgcctat
ttggcctctgaagggtttatgtagatgcttagagtgttcaacatgaatag
gtaaaatgccaaagtcccttgtctttatggaatttcctagacgtataaac
aatctaaaaattttctaattgaaccacaagccttaagcaaacaatgtttt
acatgtttttatgtattcaattaatttaattttgatcatcaagtaagtcc
ttttgtctttaattaaatgcatctttgtaataccttggcatgatggatta
caccttattttgtgtcttgaataaaaagctggagtctgtgtacccagcat
cttggagcagaatagttcacacatttgcagcagaagcaatgggttctctc
taatgtgaaatgcggtggatcattcggatcgaacatagcaggctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_73279361_73280528
seq2: B6Ng01-220H15.g_68_1214

seq1  GAATTCCATCCAAACTTCAAGAAATGGCGGGGTCTACCTAATGCAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCCAAACTTCAAGAAATGGCGGGGTCTACCTAATGCAAACAA  50

seq1  TAAGAAACAAGTCTAAAATCCAAACAGATAATAAAATAGATTTTTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACAAGTCTAAAATCCAAACAGATAATAAAATAGATTTTTAAAAA  100

seq1  ATTAGTTTAGCTTGGACAATAAATAGGTCAAAAATTTCAGGTGGTCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTTAGCTTGGACAATAAATAGGTCAAAAATTTCAGGTGGTCAGAT  150

seq1  GAAAGAATTCTGTATAACAGTAAATCTGGAACACCCATCTGACGGGCGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTCTGTATAACAGTAAATCTGGAACACCCATCTGACGGGCGTG  200

seq1  GGCTTTGGCTTCTTCACTGTCATAGCTGCTATCAGGAAAAGCTTCCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGGCTTCTTCACTGTCATAGCTGCTATCAGGAAAAGCTTCCATGT  250

seq1  GTCCCATCATGATACAGAAAGAATTCCTTTGGGAATGACACATCCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATCATGATACAGAAAGAATTCCTTTGGGAATGACACATCCCCCAG  300

seq1  ACCTGCATCCTGGCTCAAGCTCTCTAAATAATAAGCAGTCCCAAGCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCATCCTGGCTCAAGCTCTCTAAATAATAAGCAGTCCCAAGCTTCC  350

seq1  TGGGACAATGATCCTGTTGTGGCCATTAGGAATTCAGAAATCTCAACCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAATGATCCTGTTGTGGCCATTAGGAATTCAGAAATCTCAACCTG  400

seq1  CCTAAAATATGAAATAGTTAAAAACTTGAATATAGAGATTACAAAGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATATGAAATAGTTAAAAACTTGAATATAGAGATTACAAAGTCCT  450

seq1  TAAAGCCTAATATTACAATTTGTGTTAAATGCACGAACTTGTAATAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCTAATATTACAATTTGTGTTAAATGCACGAACTTGTAATAGACA  500

seq1  CGTAAGAGTAAAAGTACTTATACCAAAAGGAATTTCTTACATGAGAAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAAGAGTAAAAGTACTTATACCAAAAGGAATTTCTTACATGAGAAGTT  550

seq1  CAAAAGTTAGTCTGATGTATTTTATTTAAGAAATATGTTTGGGTTTGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTAGTCTGATGTATTTTATTTAAGAAATATGTTTGGGTTTGGGC  600

seq1  TTATTTAAAATGGAGATGAGGAAAGTGTACTTAGATTATAATCAGTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAAATGGAGATGAGGAAAGTGTACTTAGATTATAATCAGTGTGA  650

seq1  TTCCTTTTCAGATAACTTAAAATGTTTAATTCATTATATTTACAGAAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCAGATAACTTAAAATGTTTAATTCATTATATTTACAGAAGTC  700

seq1  TTTAGATAGTGGAGGAGAGGTATTATTTCTTCTGGTTGCGGTCTGCCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATAGTGGAGGAGAGGTATTATTTCTTCTGGTTGCGGTCTGCCTAT  750

seq1  TTGGCCTCTGAAGGGTTTATGTAGATGCTTAGAGTGTTCAACATGAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCTCTGAAGGGTTTATGTAGATGCTTAGAGTGTTCAACATGAATAG  800

seq1  GTAAAATGCCAAAGTCCCTTGTCTTTATGGAATTTCCTAGACGTATAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGCCAAAGTCCCTTGTCTTTATGGAATTTCCTAGACGTATAAAC  850

seq1  AATCTAAAAATTTTCTAATTGAACCACAAGCCTTAAGCAAACAATGTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAAAATTTTCTAATTGAACCACAAGCCTTAAGCAAACAATGTTTT  900

seq1  ACATGTTTTTATGTATTCAATTAATTTAATTTTGATCATCAAGTAAGTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTTATGTATTCAATTAATTTAATTTTGATCATCAAGTAAGTCC  950

seq1  TTTTGTCTTTAATTAAATGCATCTTTGTTAATTACCTTTGGCATGATGGA  1000
      ||||||||||||||||||||||||||||  | |||| |||||||||||||
seq2  TTTTGTCTTTAATTAAATGCATCTTTGT--AATACC-TTGGCATGATGGA  997

seq1  TTTACACCTTATTTTGTGTTCCTTGATAAAAAAGGCTGGAGTCTGTGTAC  1050
       ||||||||||||||||||  ||||| | |||| ||||||||||||||| 
seq2  -TTACACCTTATTTTGTGT--CTTGA-ATAAAAAGCTGGAGTCTGTGTA-  1042

seq1  CCCAGCATCCTTTGAGCAGAATAAGTTTCCACACAATTGCAGGGCAGAAG  1100
      |||||||| ||| ||||||||| ||||  |||||| |||||  |||||||
seq2  CCCAGCAT-CTTGGAGCAGAAT-AGTT--CACACATTTGCA--GCAGAAG  1086

seq1  CAATGGGTTCTCCTCTAATGTTGAAAGCGGGTGGGGAAACAAATCGGGAT  1150
      ||||||||||| |||||||| |||||   |||||   | |  ||  ||||
seq2  CAATGGGTTCT-CTCTAATG-TGAAATGCGGTGG---ATC--ATTCGGAT  1129

seq1  CAGACTAGGCAGGCTGGA  1168
      |  ||   ||||||||||
seq2  CGAACATAGCAGGCTGGA  1147