BAC Information

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BAC

Clone NameB6Ng01-221P01
Chromosome14 (Build37)
Map Location 110,513,373 - 110,514,358
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221P01.bB6Ng01-221P01.g
ACCGA037095GA037096
length1,091990
definitionB6Ng01-221P01.b B6Ng01-221P01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtctgtactccaatcccacagttatctggcaacagccatttag
gcctggcccactataaaaggggctgcttgaccccccccccttactctctt
actcttgcctctctgccctgccctcctgctctctcttcctccacattcct
ttcttctctctctccatgaggccatggccagcctctaattctctcctctc
tgccttctctgcctctactaccttcctagctcccctttccagacacttct
ccctgaaaaagatatttaacctaaggcctgtcctgagaaagggggtaagg
tttcactcctcacagctctcagccatgacaataaaagccctcaaaccatg
gatagcttcttcacataaagatccaccatactggtgcaatggagcaggtc
ttcctctatagagtgccatctaacatcttgcaagaggcctccctgggctc
ttagccaagttttccacaaagtcaagctgtctgcatgagcaagcccagga
ctcttgttgctgagtctcctccccctcttttttctttgacctggactaga
atgtgcccgaagcctgacactccattctcatcttggcatctttggcatcc
agaagaatctgggctgcacaaagtgtgagaacctgtcaaccttggagtcc
ttgtaggcctggggaccaaagagcccggtctcctgtggcacccagtagag
tctgtgatatctgagagtctgagcccactccagcaagtcagcagggacct
cagactgcacctccccacccttggaacaggtcctggggcttctcacagcc
agatgtctgcccagcagcagtgtggggtatgctcagtcaaatgtcctatg
tcctgcctccacaagcagccctactcccgtgggaggagatgctgggacac
cattttaacccacacatttaccttcttttacatttgtagttttgcaaata
ttttgggccacatatatgaaactagaatattgctccaaatccactgggaa
tagtggtataaaaataatataatatctaccttatgtaactggtgcatctc
tggtgaagtatggtggtgtggtttggtggggtgtttgccgt

gaattcttactctagtttatgtaaatcttagagattctgataaaaggaat
aagagggcttataaaacctacttatatgaaatgacctacaggtttattat
tctttctggataattgattgctaactagattaaacagggaatttcctgaa
catgtctgggagggagggcattttcttgatctatttgctgaagctagaac
aatgtactacagagtaagagcagtggctcccagtgaccaagaacagaagg
tctgaggtaaaagccatgcttagagttggctaggctttgctccttgataa
gtgagtacatctccactttcttgccttttatttatgtttcaactttcatc
gaccttggaagctaacatctttagcttttcaataagaggtctttgtcatt
agctttccactggtgatacagcctgcctcttagactgagtaactatcaga
tagtctctgaagcttgcaaaaagctaatactagaaaggaaaaccttgatt
ctgtaagctagtctaataagcccctgtcattgctgagcctttaggagtaa
gatccttgccaatggtagtgtggcactaatggcagatattgaaactatat
attctttaacctgcagtttgagtggtgttatgtggggcccctttcagcca
acaactaaatgggatgtgatccattcctggcagtagaggtttttcttgat
ggacataatatccagttgtgacactgtatctcccattatatgctcacccc
atttgaattaattccctataagaatatattttaaggaaaccttctagagt
agtagttttcaatatggcttttccaaaatgactttcaattctagttatcc
ctctccatgttctctccattttcacacatacacacacacacacacacaca
catcacactcatgtagaatcgaatcttaattccctggaaaggaactttct
tctaagttttctatactcataattcttagaaattaatcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110513373_110514358
seq2: B6Ng01-221P01.g_68_1057

seq1  GAATTCTTACTCTAGTTTATGTAAATCTTAGAGATTCTGATAAAAGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCTAGTTTATGTAAATCTTAGAGATTCTGATAAAAGGAAT  50

seq1  AAGAGGGCTTATAAAACCTACTTATATGAAATGACCTACAGGTTTATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGCTTATAAAACCTACTTATATGAAATGACCTACAGGTTTATTAT  100

seq1  TCTTTCTGGATAATTGATTGCTAACTAGATTAAACAGGGAATTTCCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGGATAATTGATTGCTAACTAGATTAAACAGGGAATTTCCTGAA  150

seq1  CATGTCTGGGAGGGAGGGCATTTTCTTGATCTATTTGCTGAAGCTAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTGGGAGGGAGGGCATTTTCTTGATCTATTTGCTGAAGCTAGAAC  200

seq1  AATGTACTACAGAGTAAGAGCAGTGGCTCCCAGTGACCAAGAACAGAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTACAGAGTAAGAGCAGTGGCTCCCAGTGACCAAGAACAGAAGG  250

seq1  TCTGAGGTAAAAGCCATGCTTAGAGTTGGCTAGGCTTTGCTCCTTGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTAAAAGCCATGCTTAGAGTTGGCTAGGCTTTGCTCCTTGATAA  300

seq1  GTGAGTACATCTCCACTTTCTTGCCTTTTATTTATGTTTCAACTTTCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTACATCTCCACTTTCTTGCCTTTTATTTATGTTTCAACTTTCATC  350

seq1  GACCTTGGAAGCTAACATCTTTAGCTTTTCAATAAGAGGTCTTTGTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGGAAGCTAACATCTTTAGCTTTTCAATAAGAGGTCTTTGTCATT  400

seq1  AGCTTTCCACTGGTGATACAGCCTGCCTCTTAGACTGAGTAACTATCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCCACTGGTGATACAGCCTGCCTCTTAGACTGAGTAACTATCAGA  450

seq1  TAGTCTCTGAAGCTTGCAAAAAGCTAATACTAGAAAGGAAAACCTTGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTCTGAAGCTTGCAAAAAGCTAATACTAGAAAGGAAAACCTTGATT  500

seq1  CTGTAAGCTAGTCTAATAAGCCCCTGTCATTGCTGAGCCTTTAGGAGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCTAGTCTAATAAGCCCCTGTCATTGCTGAGCCTTTAGGAGTAA  550

seq1  GATCCTTGCCAATGGTAGTGTGGCACTAATGGCAGATATTGAAACTATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGCCAATGGTAGTGTGGCACTAATGGCAGATATTGAAACTATAT  600

seq1  ATTCTTTAACCTGCAGTTTGAGTGGTGTTATGTGGGGCCCC-TTCAGCCA  649
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATTCTTTAACCTGCAGTTTGAGTGGTGTTATGTGGGGCCCCTTTCAGCCA  650

seq1  ACAACTAAATGGGATGTGATCCATTCCTGGCAGTAGAGGTTTTTCTTGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTAAATGGGATGTGATCCATTCCTGGCAGTAGAGGTTTTTCTTGAT  700

seq1  GGACATAATATCCAGTTGTGACACTGTATCTCCCATTATATGCTCACCCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAATATCCAGTTGTGACACTGTATCTCCCATTATATGCTCACCCC  750

seq1  ATTTGAATTAATTTCCTATAAGAATATATTTT-AGGAAA-CTTCTAGAGT  797
      ||||||||||||| |||||||||||||||||| |||||| ||||||||||
seq2  ATTTGAATTAATTCCCTATAAGAATATATTTTAAGGAAACCTTCTAGAGT  800

seq1  AGTAGTTTTCCATATGGCTTTT-CAAAATGAC-TTCAATTCTAGTTATCC  845
      |||||||||| ||||||||||| ||||||||| |||||||||||||||||
seq2  AGTAGTTTTCAATATGGCTTTTCCAAAATGACTTTCAATTCTAGTTATCC  850

seq1  CTCTCCATGTTCTCTCC-TTTTCACACATACACACACACACACACACACA  894
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCTCCATGTTCTCTCCATTTTCACACATACACACACACACACACACACA  900

seq1  CA-CACACTCATGTAGAATCGAATCTTAATTTCCCTGAAAATGGAACTTT  943
      || |||||||||||||||||||||||||| ||||||| ||| ||||||||
seq2  CATCACACTCATGTAGAATCGAATCTTAA-TTCCCTGGAAA-GGAACTTT  948

seq1  CTTCTAAGTTTTCAATAACTCATAGTTCTTAGAATTTAATCAA  986
      ||||||||||||| || ||||||| ||||||||| ||||||||
seq2  CTTCTAAGTTTTCTAT-ACTCATAATTCTTAGAAATTAATCAA  990


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