BAC Information

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BAC

Clone NameB6Ng01-222G08
Chromosome14 (Build37)
Map Location 60,432,520 - 60,433,647
singlet/doubletsinglet
Overlap geneAtp8a2
Upstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream geneLOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222G08.bB6Ng01-222G08.g
ACCGA037426GA037427
length1,1271,181
definitionB6Ng01-222G08.b B6Ng01-222G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaaggttgcacacaccaaggtgtccccaggaatttaaaaaac
ctggctatgctttcatttactgaaccttttccatcaacacaccgagaaag
gttgtagagaaaggaaagtttcacttgtttttttttgctctgctgccgtc
atcatcaccatcataatcactaccaccaccgctaccaccatcctcatcgc
catcaccattatcatctcatcatcatcaccgtcatctccatcaacactat
tatcagcaccaccaccatcatcatcatcaacaacaacctatcatcgacac
tcctatgccttgctgacattgtgctcagctgaacaaggttctcttcagaa
acatatcgcacctgtagtgctatccttccaaacttaaaaggtgcagattt
agcacattcacagtttgtgaaatgtctgctaaactaactggtaccacttg
ccttcactacggaagattaaaaggccctaatttcatatccctatggaaac
catgttgcttctgagcatctgtctgtagacactgtttaatgggttgagca
gaaccttgccattcacttaatacctgcacaaactggaaggctgatgcctc
ccatacttcttaccaatgctttctctggactcttctgcagtagcaaagta
tcttttgaccattacaagagggagaagaggctagttgctagttttcactc
aacctaagtgttgtctctttggtaccctttctcctgactattctatccca
cagtcaggttctaaggggcagatgtctttcttttcttttgtgtactggga
acaggactgaggagagggatgcgaggaaggagagctgagagcacacgggt
gtggaagctagctatgaagggcatctcttttctaaaaggtttatctgccc
aaggctgctttttgctctagaattgacccatttgagccaaatgggtgcct
ggggctaccagttaggacacaggaatcataataactacattagacttttt
ggggaggacatttaacagaaccaatcgaaggcagattgagggcttcgaga
gtcagaaaagtcagtgagatggagcgttgtaaagagatctaagaagagtg
tgatggatgggactcagaggtggggga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatacgagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaaagtacccaaggagctaaagggatcttcaacccta
taggtggaacacattatgactaccagtaccccggagcctctgactctagc
tgcatattgtatcaaagatgtctagtcgcatcactgaagagagccatgac
accgcagactttgtgtgccgtacaggcaacgcaggtcacggggggacggg
ggtagccatcatcgctacgacgaagtcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_60432520_60433647
seq2: B6Ng01-222G08.b_49_1175

seq1  GAATTCCTAAAGGTTGCACACACCAAGGTGTCCCCAGGAATTTAAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAGGTTGCACACACCAAGGTGTCCCCAGGAATTTAAAAAAC  50

seq1  CTGGCTATGCTTTCATTTACTGAACCTTTTCCATCAACACACCGAGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTATGCTTTCATTTACTGAACCTTTTCCATCAACACACCGAGAAAG  100

seq1  GTTGTAGAGAAAGGAAAGTTTCACTTGTTTTTTTTTGCTCTGCTGCCGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGAGAAAGGAAAGTTTCACTTGTTTTTTTTTGCTCTGCTGCCGTC  150

seq1  ATCATCACCATCATAATCACTACCACCACCGCTACCACCATCCTCATCGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACCATCATAATCACTACCACCACCGCTACCACCATCCTCATCGC  200

seq1  CATCACCATTATCATCTCATCATCATCACCGTCATCTCCATCAACACTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCATTATCATCTCATCATCATCACCGTCATCTCCATCAACACTAT  250

seq1  TATCAGCACCACCACCATCATCATCATCAACAACAACCTATCATCGACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCACCACCACCATCATCATCATCAACAACAACCTATCATCGACAC  300

seq1  TCCTATGCCTTGCTGACATTGTGCTCAGCTGAACAAGGTTCTCTTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGCCTTGCTGACATTGTGCTCAGCTGAACAAGGTTCTCTTCAGAA  350

seq1  ACATATCGCACCTGTAGTGCTATCCTTCCAAACTTAAAAGGTGCAGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCGCACCTGTAGTGCTATCCTTCCAAACTTAAAAGGTGCAGATTT  400

seq1  AGCACATTCACAGTTTGTGAAATGTCTGCTAAACTAACTGGTACCACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTCACAGTTTGTGAAATGTCTGCTAAACTAACTGGTACCACTTG  450

seq1  CCTTCACTACGGAAGATTAAAAGGCCCTAATTTCATATCCCTATGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACTACGGAAGATTAAAAGGCCCTAATTTCATATCCCTATGGAAAC  500

seq1  CATGTTGCTTCTGAGCATCTGTCTGTAGACACTGTTTAATGGGTTGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGCTTCTGAGCATCTGTCTGTAGACACTGTTTAATGGGTTGAGCA  550

seq1  GAACCTTGCCATTCACTTAATACCTGCACAAACTGGAAGGCTGATGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTGCCATTCACTTAATACCTGCACAAACTGGAAGGCTGATGCCTC  600

seq1  CCATACTTCTTACCAATGCTTTCTCTGGACTCTTCTGCAGTAGCAAAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTCTTACCAATGCTTTCTCTGGACTCTTCTGCAGTAGCAAAGTA  650

seq1  TCTTTTGACCATTACAAGAGGGAGAAGAGGCTAGTTGCTAGTTTTCACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGACCATTACAAGAGGGAGAAGAGGCTAGTTGCTAGTTTTCACTC  700

seq1  AACCTAAGTGTTGTCTCTTTGGTACCCTTTCTCCTGACTATTCTATCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGTGTTGTCTCTTTGGTACCCTTTCTCCTGACTATTCTATCCCA  750

seq1  CAGTCAGGTTCTAAGGGGCAGATGTCTTTC-TTTCTTTTGTGTACTGGGA  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGTCAGGTTCTAAGGGGCAGATGTCTTTCTTTTCTTTTGTGTACTGGGA  800

seq1  ACAGGACTGAGGAGAGGGATGCGAGGAAGGAGAGCTGAGAGCACACGGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACTGAGGAGAGGGATGCGAGGAAGGAGAGCTGAGAGCACACGGGT  850

seq1  GTGGAAGCTAGCTATGAAGGGCATCTCTTTTCTAAAAGGTTTATCTGCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGCTAGCTATGAAGGGCATCTCTTTTCTAAAAGGTTTATCTGCCC  900

seq1  AAGGCTGCTTTTTGCTCTAGAATTGACCCATTTGAGCCAAATGGGTGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCTTTTTGCTCTAGAATTGACCCATTTGAGCCAAATGGGTGCCT  950

seq1  GGGGCTACCAGTTAGGACACAGGAATCAT-ATAACTACATTAGACTTTTT  998
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGGGCTACCAGTTAGGACACAGGAATCATAATAACTACATTAGACTTTTT  1000

seq1  -GGGAGGACATTTAACAGAACCAAATCGAAGGCAGATTGAAGGGCTTCGA  1047
       ||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  GGGGAGGACATTTAACAGAACC-AATCGAAGGCAGATTG-AGGGCTTCGA  1048

seq1  GAGTCAGAAAAGTCAGTGAGAT-GAGCGTTGTAGAGAGATCCTAAG-AGA  1095
      |||||||||||||||||||||| |||||||||| |||||| ||||| |||
seq2  GAGTCAGAAAAGTCAGTGAGATGGAGCGTTGTAAAGAGAT-CTAAGAAGA  1097

seq1  GTGTGATGGATGGGAACCTCAGAGGGTGGGGGA  1128
      |||||||||||||||  |||||| |||||||||
seq2  GTGTGATGGATGGGA--CTCAGA-GGTGGGGGA  1127