BAC Information

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BAC

Clone NameB6Ng01-225P13
Chromosome14 (Build37)
Map Location 28,969,773 - 29,140,269
singlet/doubletdoublet
Overlap geneErc2
Upstream geneLOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370
Downstream geneLOC100040206, Wnt5a, LOC100040218, Cacna2d3, Lrtm1, Ppia-ps15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225P13.bB6Ng01-225P13.g
ACCGA040031GA040032
length1,147196
definitionB6Ng01-225P13.b B6Ng01-225P13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(29,139,127 - 29,140,269)(28,969,773 - 28,969,968)
sequence
gaattcaatacaagacctaggaagacaagatcagttgagttataagcaat
gtccttcctgtttttcagagttctgctttgagggcactggccatccttac
tgggcttataaaattctccccagccgtaagacttgtgttagcaggggcaa
atgatgctcctggactctggtgcttcctcctttgcccttttttgactctc
cattccaaggagggaaagataattctctactgtgcctgttgtactgaggc
ccgggagcctgaagagccctggcgattggcaatgggaatgatacagccac
gcccctcccttctcagaagaaagcaggccgctctctagtttcccagcacg
ttgcccatcctcagacatacaaggctgagaaggatttcttatgacatgtt
ttcatcatgttcccaagtttgggcctggtgccaaggaacgagaacacaga
gaataaataaaaccgtaaaaccaaccaaaaccaacagccaccagagccag
gactagaagcatcagtttacagaccagttctatgaggcaaaggagacctg
ctttataatggcagctgtcagaaatcagagtgtagacaagggaggagcta
ggcaatcatatgatctattaattatactacaagctgattcaaggtctcca
tagtgtgtctcacacccagcaggggcaaggacccttcagagcattgccag
gaatagatcagcgagcggggcagtggtagtcctctctgctccttaggcct
tggttccccactctgcctgatagctaaacagatgtcagtgttataaagag
atcctagtccatccacggggaaagagaggtgagcggtaaggttctgtgac
aaccatcacaggactaggattattgccttcaaaggcctaagagtggaaac
acagcttgaactaaatctgtgctgcaccgtggtacagcgcttcccagacc
acgctgctcctgggaccctggagagttgggccttctgggccccatcaagg
tatgttacaaggccttagcccccaccttcaaaatgagacgttagaattga
cttttctctacatgacaatttgaaatttggtttctgattcttattggact
ttctgaaatttttcttctacctaccaaagaaaggcatctagcagtaa
ttcgcatttgcattagaaacaattgatatatttataataagaaaagatgc
cagatagtgatggcacatacatttaatgtgagtacttggcaggttgatct
ccatgagttccaggccagcatggtctacaaaactagttccagaacacaaa
gaaaccctgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_29139127_29140269
seq2: B6Ng01-225P13.b_42_1188 (reverse)

seq1  TTACTGCTCGATGCCTTT-TTTTGTATGTAGAAGAAAAA--TCAGAAAGT  47
      |||||||| ||||||||| ||| ||| ||||||||||||  |||||||| 
seq2  TTACTGCTAGATGCCTTTCTTTGGTAGGTAGAAGAAAAATTTCAGAAAG-  49

seq1  TCAAATAAGGATTCAGAAACAAATTTTCAAATTGTCATGTAGAG-AAAGT  96
      || ||||| || |||||||| || |||||||||||||||||||| |||||
seq2  TCCAATAA-GAATCAGAAACCAAATTTCAAATTGTCATGTAGAGAAAAGT  98

seq1  CCAAATTCTAACCTTCTCATTTTGAAG--TGGGGCTAAGGCCTTGTAACA  144
      |  |||||||| | |||||||||||||   ||||||||||||||||||||
seq2  C--AATTCTAA-CGTCTCATTTTGAAGGTGGGGGCTAAGGCCTTGTAACA  145

seq1  TACCTTGATGGGG-CCAGAAGG-CCAACTCTCCAGGGTCCCAGGAGCAGC  192
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  TACCTTGATGGGGCCCAGAAGGCCCAACTCTCCAGGGTCCCAGGAGCAGC  195

seq1  GT-GTCTGGGAAGCGCTGTACCACGGTGCAGCACAGATTTAGTTCAAGCT  241
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTGGGAAGCGCTGTACCACGGTGCAGCACAGATTTAGTTCAAGCT  245

seq1  GTGTTTCCACTCTTAGGCCTTTGAAGGCAATAATCCTAGTCCTGTGATGG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCACTCTTAGGCCTTTGAAGGCAATAATCCTAGTCCTGTGATGG  295

seq1  TTGTCACAGAACCTTACCGCTCACCTCTCTTTCCCCGTGGATGGACTAGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACAGAACCTTACCGCTCACCTCTCTTTCCCCGTGGATGGACTAGG  345

seq1  ATCTCTTTATAACACTGACATCTGTTTAGCTATCAGGCAGAGTGGGGAAC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTATAACACTGACATCTGTTTAGCTATCAGGCAGAGTGGGGAAC  395

seq1  CAAGGCCTAAGGAGCAGAGAGGACTACCACTGCCCCGCTCGCTGATCTAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCTAAGGAGCAGAGAGGACTACCACTGCCCCGCTCGCTGATCTAT  445

seq1  TCCTGGCAATGCTCTGAAGGGTCCTTGCCCCTGCTGGGTGTGAGACACAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCAATGCTCTGAAGGGTCCTTGCCCCTGCTGGGTGTGAGACACAC  495

seq1  TATGGAGACCTTGAATCAGCTTGTAGTATAATTAATAGATCATATGATTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAGACCTTGAATCAGCTTGTAGTATAATTAATAGATCATATGATTG  545

seq1  CCTAGCTCCTCCCTTGTCTACACTCTGATTTCTGACAGCTGCCATTATAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTCCTCCCTTGTCTACACTCTGATTTCTGACAGCTGCCATTATAA  595

seq1  AGCAGGTCTCCTTTGCCTCATAGAACTGGTCTGTAAACTGATGCTTCTAG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTCTCCTTTGCCTCATAGAACTGGTCTGTAAACTGATGCTTCTAG  645

seq1  TCCTGGCTCTGGTGGCTGTTGGTTTTGGTTGGTTTTACGGTTTTATTTAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTCTGGTGGCTGTTGGTTTTGGTTGGTTTTACGGTTTTATTTAT  695

seq1  TCTCTGTGTTCTCGTTCCTTGGCACCAGGCCCAAACTTGGGAACATGATG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTTCTCGTTCCTTGGCACCAGGCCCAAACTTGGGAACATGATG  745

seq1  AAAACATGTCATAAGAAATCCTTCTCAGCCTTGTATGTCTGAGGATGGGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGTCATAAGAAATCCTTCTCAGCCTTGTATGTCTGAGGATGGGC  795

seq1  AACGTGCTGGGAAACTAGAGAGCGGCCTGCTTTCTTCTGAGAAGGGAGGG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCTGGGAAACTAGAGAGCGGCCTGCTTTCTTCTGAGAAGGGAGGG  845

seq1  GCGTGGCTGTATCATTCCCATTGCCAATCGCCAGGGCTCTTCAGGCTCCC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGGCTGTATCATTCCCATTGCCAATCGCCAGGGCTCTTCAGGCTCCC  895

seq1  GGGCCTCAGTACAACAGGCACAGTAGAGAATTATCTTTCCCTCCTTGGAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCAGTACAACAGGCACAGTAGAGAATTATCTTTCCCTCCTTGGAA  945

seq1  TGGAGAGTCAAAAAAGGGCAAAGGAGGAAGCACCAGAGTCCAGGAGCATC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTCAAAAAAGGGCAAAGGAGGAAGCACCAGAGTCCAGGAGCATC  995

seq1  ATTTGCCCCTGCTAACACAAGTCTTACGGCTGGGGAGAATTTTATAAGCC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCCCTGCTAACACAAGTCTTACGGCTGGGGAGAATTTTATAAGCC  1045

seq1  CAGTAAGGATGGCCAGTGCCCTCAAAGCAGAACTCTGAAAAACAGGAAGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGGATGGCCAGTGCCCTCAAAGCAGAACTCTGAAAAACAGGAAGG  1095

seq1  ACATTGCTTATAACTCAACTGATCTTGTCTTCCTAGGTCTTGTATTGAAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGCTTATAACTCAACTGATCTTGTCTTCCTAGGTCTTGTATTGAAT  1145

seq1  TC  1143
      ||
seq2  TC  1147

seq1: chr14_28969773_28969968
seq2: B6Ng01-225P13.g_72_267

seq1  TTCGCATTTGCATTAGAAACAATTGATATATTTATAATAAGAAAAGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCATTTGCATTAGAAACAATTGATATATTTATAATAAGAAAAGATGC  50

seq1  CAGATAGTGATGGCACATACATTTAATGTGAGTACTTGGCAGGTTGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGTGATGGCACATACATTTAATGTGAGTACTTGGCAGGTTGATCT  100

seq1  CCATGAGTTCCAGGCCAGCATGGTCTACAAAACTAGTTCCAGAACACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGAGTTCCAGGCCAGCATGGTCTACAAAACTAGTTCCAGAACACAAA  150

seq1  GAAACCCTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  196