BAC Information

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BAC

Clone NameB6Ng01-226P06
Chromosome14 (Build37)
Map Location 74,956,123 - 74,956,909
singlet/doubletsinglet
Overlap genenone
Upstream geneSucla2, LOC100043734, EG629578, LOC629583
Downstream geneHtr2a, LOC668508, Esd, Lrch1, ENSMUSG00000075519, LOC100043169, 5031414D18Rik, 4921509B22Rik, LOC100043176, Lcp1, Cpb2, Zc3h13, Gm912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226P06.bB6Ng01-226P06.g
ACCGA040750GA040751
length1,2101,077
definitionB6Ng01-226P06.b B6Ng01-226P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcttccctcccttccaatgcagactgatttctactctttagc
ttggtaaagttggtaaaactgtttcctgagactatttctttgttggctga
tttatggtgattacatttgggagaactttgcagaaaatccttgctcaaca
gatttcagaatcaccaccatcttgtatttctcttaccttttctcttactg
taaagaaagtagactggttagtgctgagcctaatatgcacagtgcaagaa
aaggctgaaacactgctaatttctactttggtatgaattacttacctacc
cgcaaatgactagcaagtgactataacttactcagatcttagactctagt
cagtctattcagaatttttaacatcagaagcgatggatggtggatatatt
aatattgttgcctgagtgactatcaagttctcagtcctaagtgtgacatc
tatatcagcttcccttctcccccaccacaagggaatatccttcataagag
ctgaaggatgggacaggtgctgttgaacctgtccctggccatggcatgct
gttgcactcatgagtttactgcagctgaggttacccacacaagatcaaga
caagatcagccacccttcagacaggcagcactaagtttcattggttatta
ttattattggaatgatatggtgtcacgggactccggtggagtcagcttgt
cagatgaaaatctgaaagctttctcatgaggaaagagtttcaaggaaact
tactcccggatctttggctattcccctaacccataaaattaaatttccaa
atccacattagtctagtgtatggatccacgtgcactctatatagcattac
ctttatagtaaatgccttttagattgtattctaacatagctaaagccctt
ttcccagtgttctagaatccagatagcagcaaggagtttaacctattcag
ttaactaattaagctctaccattaaaacaataaagcacttgccatttaac
tcagctgttttgcagaaagaagactaaaagttctccactgaagatagaaa
tctttttactacaggctacatcatgttcaagtattaagttgaatatactt
accctattaggggtacctctcagaacgataggttccagacctagattaag
agttcctgatacactaacctaagcattcagagtaacacctcctgaatgcc
tttttaagcg
gaattcccactccacaggaaggaattccagcctgctactgcagactaaga
cagaaacctttggctggtaatgttacaggccttcatggggaaactactgt
tgttgttttcttaagtgaatgtgatgtgcctgttaaattgccttctacaa
gctttttattcccagagaatagctctgctatcagctttgatccaagaagc
ttctttttgccatattattgtcatgcaacaatgactacagagactcataa
ctagtcaaagtaaagataataaatgacctttgaatacacagctttaagtg
agacatatgtagcacccatttcaaggctgagaaatccctgcataagaggc
agaaagaacaggagatcaggagaaatgtggcaatgtgtgaaatgctgact
tctgagtatggcatggctgctgacgtcatctggtattattctacacacaa
tctcctattgattgggtctgtcacactttgtcaaagaaagaggagaggct
catggggccctacctgatgagagtttatatgcaaggtatggataacagga
aagggagagaaaatgtcttctgttgtgtagccacaagcaagatgctcatg
ctcctataaacaaccccagtgaagcttgtagcttatagggtaatgaaaaa
attacacgaaagtaaactgtgtgtggctgggaagaggaaaagggtgagca
gggatttgaagggcaaagaaagggtagttgggttaaatatgatcaaaatg
ctttcatgtacatgcatgaaaagtgtcacagtgaaagacattatgtataa
ttcatacatgggtaatagaaagcactgaaataaaattaaaaagtgctcta
atttataggaaaggaacatgtgggggaaaacatactgcgttgttacacta
aaaatcctggagtttgaaggaacagtgtgcaggtatatattaatgactga
ttttgacgaagagcaagcagattctgtattcattttgttgaataccaagt
ggtgaattattaatgctaaatccaggctttagcttgccatctacaccatg
ctgtcatgaagtttggctaaattatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_74956123_74956909
seq2: B6Ng01-226P06.g_347_1143

seq1  TGAATACACAGCTTTAAGTGAGACATATGTAGCACCCATTTCAAGGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACACAGCTTTAAGTGAGACATATGTAGCACCCATTTCAAGGCTGA  50

seq1  GAAATCCCTGCATAAGAGGCAGAAAGAACAGGAGATCAGGAGAAATGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCCTGCATAAGAGGCAGAAAGAACAGGAGATCAGGAGAAATGTGG  100

seq1  CAATGTGTGAAATGCTGACTTCTGAGTATGGCATGGCTGCTGACGTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTGAAATGCTGACTTCTGAGTATGGCATGGCTGCTGACGTCATC  150

seq1  TGGTATTATTCTACACACAATCTCCTATTGATTGGGTCTGTCACACTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTATTCTACACACAATCTCCTATTGATTGGGTCTGTCACACTTTG  200

seq1  TCAAAGAAAGAGGAGAGGCTCATGGGGCCCTACCTGATGAGAGTTTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAAAGAGGAGAGGCTCATGGGGCCCTACCTGATGAGAGTTTATAT  250

seq1  GCAAGGTATGGATAACAGGAAAGGGAGAGAAAATGTCTTCTGTTGTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGTATGGATAACAGGAAAGGGAGAGAAAATGTCTTCTGTTGTGTAG  300

seq1  CCACAAGCAAGATGCTCATGCTCCTATAAACAACCCCAGTGAAGCTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGCAAGATGCTCATGCTCCTATAAACAACCCCAGTGAAGCTTGTA  350

seq1  GCTTATAGGGTAATGAAAAAATTACACGAAAGTAAACTGTGTGTGGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATAGGGTAATGAAAAAATTACACGAAAGTAAACTGTGTGTGGCTGG  400

seq1  GAAGAGGAAAAGGGTGAGCAGGGATTTGAAGGGCAAAGAAAGGGTAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAAAAGGGTGAGCAGGGATTTGAAGGGCAAAGAAAGGGTAGTTG  450

seq1  GGTTAAATATGATCAAAATGC-TTCATGTACATGCATG-AAAGTGTCACA  498
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  GGTTAAATATGATCAAAATGCTTTCATGTACATGCATGAAAAGTGTCACA  500

seq1  GTGAAAGACATTATGTATAATTCATACAT-GGTAATAG-AAGCACTGAAA  546
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  GTGAAAGACATTATGTATAATTCATACATGGGTAATAGAAAGCACTGAAA  550

seq1  TAAAATTAAAAAGTGCTCTAATTTATAGGAAAGGAACATGT-GGGGAAAA  595
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAAAATTAAAAAGTGCTCTAATTTATAGGAAAGGAACATGTGGGGGAAAA  600

seq1  CATACTGCGTTGTTACACTAAAAATCCTGGAGTTTGAAGGAACAGTGTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGCGTTGTTACACTAAAAATCCTGGAGTTTGAAGGAACAGTGTGC  650

seq1  AGGTATATATTTAATGACTGATTTTACAGAAGAGCAAGCAGA-TCTGTA-  693
      ||||||||| |||||||||||||||   |||||||||||||| |||||| 
seq2  AGGTATATA-TTAATGACTGATTTTGACGAAGAGCAAGCAGATTCTGTAT  699

seq1  TCATTTGGT--GATACCCAGGTGTGAA-TATTAATGCTAGATCCAGGCTT  740
      |||||| ||   ||||| ||  ||||| ||||||||||| ||||||||||
seq2  TCATTTTGTTGAATACCAAGTGGTGAATTATTAATGCTAAATCCAGGCTT  749

seq1  TAGC-TGCCATCAAAACCTTGCTGTCATGAAGTTTGGTAAAGTTATGT  787
      |||| ||||||| | ||| ||||||||||||||||||  || ||||||
seq2  TAGCTTGCCATCTACACCATGCTGTCATGAAGTTTGGCTAAATTATGT  797