BAC Information

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BAC

Clone NameB6Ng01-228B14
Chromosome14 (Build37)
Map Location 9,534,630 - 9,535,768
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000058570, EG666976, Flnb, Dnase1l3, Abhd6, Rpp14, Pxk, Pdhb, Kctd6, Acox2, BC055107, Oit1, LOC667005, 4930452B06Rik
Downstream geneLOC100041948, Fhit
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228B14.bB6Ng01-228B14.g
ACCGA041596GA041597
length1,1491,206
definitionB6Ng01-228B14.b B6Ng01-228B14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgattaaatgggtcattttgcttctgtacttaagcagcagttg
cttattctaaattactgcttaggtttgggaagtgaattcactaagttctg
tgaataatgattttacatataaacgtgtcctgttgctcaagatggaattt
attaataacatgtgcacgaaggaatagtgtttcgcttaaggattacaatt
tgttggctcattatatgtaggaattgtgaagtgcttacctaataattcta
ggcatcaaaaagaagttcaagactatctttgatttagccagtcagaatac
atacacatgaaatggtgttaaataaaaccctgggtaatcattcattaagt
acagtcctataattgaactgataggaagtgtcttagggtttcttttcctg
tgaagagacaccatgaccatggcaactcctataacaagtacaattagctg
gggatggtttacagttccagatgtttagtccattattgtcatggtgagaa
gcatggtaatgtgcagactgacatggtgttggagaagaagctgaccctaa
tggtcctgatagtgatattccctatgagcctatgggggttatttttttca
aacaaccatagtgttagaggtaggaaatgctagaataaagaaataatgaa
taaggaatagagaaagtaatgtttatgcagtgaattcaagaaaaagactt
gtggagtgtttccattatgccaaagactgtgttgtgttaggatgctaagg
aatcaagatggatctttgtggtcactttattggggtcttctgagcaatgt
gtaaaaatggccaaccttccataggaataccaaagaagcacgtgtctgtg
tttgtgagtcgatatgtacccattcttgaatattgggtgtgaaattttta
gaaaaacagaaaattcataaaactgttgtgtattgttaaacacagttgcc
acttgtgattttttatttcctagttacttttggaagaatattgactttac
caagaatttgttccaagccttccttctctcaatagactaacccattttat
atttcaggaaaataagaagtgactctgccaagtagggatattggttaaag
aaagcatggggttagcctttgaactcagtttgtaaagaactatgtggcc
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaaggaaatgcaaatcaaaacaaccctgaaat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaaaaggaacactcctccattgttggtg
ggattgcaagcttgtacaacaactctcgaaatcagtctggagtttcctta
gaaaattggacatagtactactggaggatccagcaatacctcttcttggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaggctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgcaattcctaggcaa
atggatgaacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaact
taggatacccaagatataagatacaatttgctaaatgcatgaaaataaaa
aagaatgaacaccaaagtgtggacactgtgcccctttcttagaattggga
agaaaacacccatggaaggagttatagagacaaagtttggagctgtgaag
aaaggatggaccttctagagactgtgatatccggggatccatcccataat
cagctttccaaacactgacacccattgaatacactagcaagattttgctt
gaaaaggacccagatatagcctcttccctttgtgtgactatgtcggggcc
ttacaaagcaccagaagtggatgctcacagttcagcttattggatggatc
acagggcccccaatgggaggaagctagaagtaaagtaacttaaggagcta
aagggaatctgtcatacccttataggtggaacaacattaatgaatctaaa
ccaggtaccccggagccttcttgacctctagcttgctatagtgctcaaaa
agatggccctagtcggccattacactggataggagaaggccaatttgaac
ttggctaacctttattatgccccaagttaccagggaaaaaaaaaaagaac
tactag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_9534630_9535768
seq2: B6Ng01-228B14.b_47_1195

seq1  GAATTCATGATTAAATGGGTCATTTTGCTTCTGTACTTAAGCAGCAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGATTAAATGGGTCATTTTGCTTCTGTACTTAAGCAGCAGTTG  50

seq1  CTTATTCTAAATTACTGCTTAGGTTTGGGAAGTGAATTCACTAAGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCTAAATTACTGCTTAGGTTTGGGAAGTGAATTCACTAAGTTCTG  100

seq1  TGAATAATGATTTTACATATAAACGTGTCCTGTTGCTCAAGATGGAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATGATTTTACATATAAACGTGTCCTGTTGCTCAAGATGGAATTT  150

seq1  ATTAATAACATGTGCACGAAGGAATAGTGTTTCGCTTAAGGATTACAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAACATGTGCACGAAGGAATAGTGTTTCGCTTAAGGATTACAATT  200

seq1  TGTTGGCTCATTATATGTAGGAATTGTGAAGTGCTTACCTAATAATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCTCATTATATGTAGGAATTGTGAAGTGCTTACCTAATAATTCTA  250

seq1  GGCATCAAAAAGAAGTTCAAGACTATCTTTGATTTAGCCAGTCAGAATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCAAAAAGAAGTTCAAGACTATCTTTGATTTAGCCAGTCAGAATAC  300

seq1  ATACACATGAAATGGTGTTAAATAAAACCCTGGGTAATCATTCATTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACATGAAATGGTGTTAAATAAAACCCTGGGTAATCATTCATTAAGT  350

seq1  ACAGTCCTATAATTGAACTGATAGGAAGTGTCTTAGGGTTTCTTTTCCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCTATAATTGAACTGATAGGAAGTGTCTTAGGGTTTCTTTTCCTG  400

seq1  TGAAGAGACACCATGACCATGGCAACTCCTATAACAAGTACAATTAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGACACCATGACCATGGCAACTCCTATAACAAGTACAATTAGCTG  450

seq1  GGGATGGTTTACAGTTCCAGATGTTTAGTCCATTATTGTCATGGTGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGTTTACAGTTCCAGATGTTTAGTCCATTATTGTCATGGTGAGAA  500

seq1  GCATGGTAATGTGCAGACTGACATGGTGTTGGAGAAGAAGCTGACCCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTAATGTGCAGACTGACATGGTGTTGGAGAAGAAGCTGACCCTAA  550

seq1  TGGTCCTGATAGTGATATTCCCTATGAGCCTATGGGGGTTATTTTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTGATAGTGATATTCCCTATGAGCCTATGGGGGTTATTTTTTTCA  600

seq1  AACAACCATAGTGTTAGAGGTAGGAAATGCTAGAATAAAGAAATAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCATAGTGTTAGAGGTAGGAAATGCTAGAATAAAGAAATAATGAA  650

seq1  TAAGGAATAGAGAAAGTAATGTTTATGCAGTGAATTCAAGAAAAAGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAATAGAGAAAGTAATGTTTATGCAGTGAATTCAAGAAAAAGACTT  700

seq1  GTGGAGTGTTTCCATTATGCCAAAGACTGTGTTGTGTTAGGATGCTAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTGTTTCCATTATGCCAAAGACTGTGTTGTGTTAGGATGCTAAGG  750

seq1  AATCAAGATGGATC-TTGTGGTCACTTTATTGGGGTCTTCTGAGCAATGT  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATCAAGATGGATCTTTGTGGTCACTTTATTGGGGTCTTCTGAGCAATGT  800

seq1  GTAAAAATGGCCAACCTTCCATAGGAATACCAAAGAAGCACGTGTCTGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAATGGCCAACCTTCCATAGGAATACCAAAGAAGCACGTGTCTGTG  850

seq1  TTTGTGAGTCGATATGTACCCATTCTTGAATATT-GGTGTGAAATTTTTA  898
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTGTGAGTCGATATGTACCCATTCTTGAATATTGGGTGTGAAATTTTTA  900

seq1  GAAAAACAGAAAATTCATAAAACTG-TGTGTATTGTTAAACACAGTTGCC  947
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAAAAACAGAAAATTCATAAAACTGTTGTGTATTGTTAAACACAGTTGCC  950

seq1  ACTTGTGA-TGTTTATTT-CTAGTTAC-TTTGGAAGA--AATGAC-TTAC  991
      |||||||| | ||||||| |||||||| |||||||||  | |||| ||||
seq2  ACTTGTGATTTTTTATTTCCTAGTTACTTTTGGAAGAATATTGACTTTAC  1000

seq1  CAAG-ATTTGTCCCAAGCCTTCCTTCTCTCAATAGACTAACC--ATTTAT  1038
      |||| |||||| ||||||||||||||||||||||||||||||   |||||
seq2  CAAGAATTTGTTCCAAGCCTTCCTTCTCTCAATAGACTAACCCATTTTAT  1050

seq1  ATTTCAGGAAAATAAGAAAGTTGAACTCTGCAAAGTA-GGATATTGGTTA  1087
      |||||||||||||||| ||||   ||||||| ||||| ||||||||||||
seq2  ATTTCAGGAAAATAAG-AAGT--GACTCTGCCAAGTAGGGATATTGGTTA  1097

seq1  AAGAAAAGCATGGGG-TAGCCTTTGAAACTCAGTTTGTAGAG-ACTATGT  1135
      ||| ||||||||||| ||||||||| ||||||||||||| || |||||||
seq2  AAG-AAAGCATGGGGTTAGCCTTTG-AACTCAGTTTGTAAAGAACTATGT  1145

seq1  GGCC  1139
      ||||
seq2  GGCC  1149