BAC Information

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BAC

Clone NameB6Ng01-229I13
Chromosome14 (Build37)
Map Location 100,352,076 - 100,492,584
singlet/doubletdoublet
Overlap geneKlf12
Upstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623
Downstream geneLOC100043413, EG668683, EG668684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229I13.bB6Ng01-229I13.g
ACCGA042648GA042649
length3101,125
definitionB6Ng01-229I13.b B6Ng01-229I13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(100,492,275 - 100,492,584)(100,352,076 - 100,353,199)
sequence
ctcgctggatagctggacattctttcctttccagagcaggcagctctttc
aaagttttgtattatccctggaactatgtctgattctcatctcagactct
gaacgtctttgtgactctgtccttcattatggagtatttttaaatgtacc
taaaatagatctgtgtagcaatttgtttacagtactggaacatggggtga
gatggctcacaatcttccttaaggatgatagtatttaatgtagtttatcg
atgtcatcagctggagagttggatttttctaattgcaggttagggaggga
gggagggagg
gaattctaatcaaatcaatagggaaagtgttgagttggtttcagtacaga
gttacagagacgtctgagccacaggaagttctgtggcagctctgtctatg
tcgatactggcagccaggctgcctggagaactttaaggtaaggctgctag
caccttatgaatacactgaactacagagacaccttagtttccgagcttgg
catctaaagttgagtggccaaagacctcagtcatgccccacagggcccaa
gaagcatgtagaaactggttgggaatatatgtggaaccacaggttatccc
actaacaggactgaataaaccccagtgaaatccatatgtgcttccgaaat
ggggcaggacattcgccactaccgttatgaagcaagtcacagaggaattc
actaagcttgctttgctggccttcccagccattagtaccctccctacatg
gtacagctcaggccaaagaggatacagcatttatttctaagaacattttg
gattttatgctactaaccaaaggactaattcagagtatttaacaaagaat
acttcctaggggtcactacatagttgtttggttgctgataaaagaacact
atcactgataaaattcagagaaagataaacaagaaaagaactgataaaaa
tgtatgagacattgctttgctcaatacgttcaccaatcaaattaggttca
tattaatctatgatatgacaactgactttaaaaacaacaacaattcagtt
gtgtgaataaataacagataaagggtttgagaaaggttaaacaaactgaa
gttcagaaagtgggctttttcattagctgctttccaggtagtaaatacgc
caacacttcaagagatagaaagaagggtggctagaagtaagaggattatt
acctagagtggtttcttaaagggtaagttggtgaccccaaaggggtttag
taacaaaacgagagagactgcaaacccaatcaacagtgtgaaaggcatct
ctgattacctagcaggtttcagagaagacagtggccctttaagctgatgc
tgggagctagatttggaatatcatagcaacagttctgagcttgacatgga
ccgctaaggtctggttagatgagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_100492275_100492584
seq2: B6Ng01-229I13.b_52_361 (reverse)

seq1  CCTCCCTCCCTCCCTCCCTAACCTGCAATTAGAAAAATCCAACTCTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCTCCCTAACCTGCAATTAGAAAAATCCAACTCTCCAG  50

seq1  CTGATGACATCGATAAACTACATTAAATACTATCATCCTTAAGGAAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGACATCGATAAACTACATTAAATACTATCATCCTTAAGGAAGATT  100

seq1  GTGAGCCATCTCACCCCATGTTCCAGTACTGTAAACAAATTGCTACACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCATCTCACCCCATGTTCCAGTACTGTAAACAAATTGCTACACAG  150

seq1  ATCTATTTTAGGTACATTTAAAAATACTCCATAATGAAGGACAGAGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTAGGTACATTTAAAAATACTCCATAATGAAGGACAGAGTCAC  200

seq1  AAAGACGTTCAGAGTCTGAGATGAGAATCAGACATAGTTCCAGGGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACGTTCAGAGTCTGAGATGAGAATCAGACATAGTTCCAGGGATAAT  250

seq1  ACAAAACTTTGAAAGAGCTGCCTGCTCTGGAAAGGAAAGAATGTCCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACTTTGAAAGAGCTGCCTGCTCTGGAAAGGAAAGAATGTCCAGCT  300

seq1  ATCCAGCGAG  310
      ||||||||||
seq2  ATCCAGCGAG  310

seq1: chr14_100352076_100353199
seq2: B6Ng01-229I13.g_68_1192

seq1  GAATTCTAATCAAATCAATAGGGAAAGTGTTGAGTTGGTTTCAGTACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATCAAATCAATAGGGAAAGTGTTGAGTTGGTTTCAGTACAGA  50

seq1  GTTACAGAGACGTCTGAGCCACAGGAAGTTCTGTGGCAGCTCTGTCTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGAGACGTCTGAGCCACAGGAAGTTCTGTGGCAGCTCTGTCTATG  100

seq1  TCGATACTGGCAGCCAGGCTGCCTGGAGAACTTTAAGGTAAGGCTGCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATACTGGCAGCCAGGCTGCCTGGAGAACTTTAAGGTAAGGCTGCTAG  150

seq1  CACCTTATGAATACACTGAACTACAGAGACACCTTAGTTTCCGAGCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTATGAATACACTGAACTACAGAGACACCTTAGTTTCCGAGCTTGG  200

seq1  CATCTAAAGTTGAGTGGCCAAAGACCTCAGTCATGCCCCACAGGGCCCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAAGTTGAGTGGCCAAAGACCTCAGTCATGCCCCACAGGGCCCAA  250

seq1  GAAGCATGTAGAAACTGGTTGGGAATATATGTGGAACCACAGGTTATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGTAGAAACTGGTTGGGAATATATGTGGAACCACAGGTTATCCC  300

seq1  ACTAACAGGACTGAATAAACCCCAGTGAAATCCATATGTGCTTCCGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGGACTGAATAAACCCCAGTGAAATCCATATGTGCTTCCGAAAT  350

seq1  GGGGCAGGACATTCGCCACTACCGTTATGAAGCAAGTCACAGAGGAATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAGGACATTCGCCACTACCGTTATGAAGCAAGTCACAGAGGAATTC  400

seq1  ACTAAGCTTGCTTTGCTGGCCTTCCCAGCCATTAGTACCCTCCCTACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCTTGCTTTGCTGGCCTTCCCAGCCATTAGTACCCTCCCTACATG  450

seq1  GTACAGCTCAGGCCAAAGAGGATACAGCATTTATTTCTAAGAACATTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGCTCAGGCCAAAGAGGATACAGCATTTATTTCTAAGAACATTTTG  500

seq1  GATTTTATGCTACTAACCAAAGGACTAATTCAGAGTATTTAACAAAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATGCTACTAACCAAAGGACTAATTCAGAGTATTTAACAAAGAAT  550

seq1  ACTTCCTAGGGGTCACTACATAGTTGTTTGGTTGCTGATAAAAGAACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTAGGGGTCACTACATAGTTGTTTGGTTGCTGATAAAAGAACACT  600

seq1  ATCACTGATAAAATTCAGAGAAAGATAAACAAGAAAAGAACTGATAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGATAAAATTCAGAGAAAGATAAACAAGAAAAGAACTGATAAAAA  650

seq1  TGTATGAGACATTGCTTTGCTCAATACGTTCACCAATCAAATTAGGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAGACATTGCTTTGCTCAATACGTTCACCAATCAAATTAGGTTCA  700

seq1  TATTAATCTATGATATGACAACTGACTTTAAAAACAACAACAATTCAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATCTATGATATGACAACTGACTTTAAAAACAACAACAATTCAGTT  750

seq1  GTGTGAATAAATAACAGAT-AAGGGTTTGAGAAAGGTTAAACAAACTGAA  799
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTGTGAATAAATAACAGATAAAGGGTTTGAGAAAGGTTAAACAAACTGAA  800

seq1  GTTCAGAAAGTGGGC-TTTTCAATAGCTGC-TTCCAGGTAGTAAATACGC  847
      ||||||||||||||| |||||| ||||||| |||||||||||||||||||
seq2  GTTCAGAAAGTGGGCTTTTTCATTAGCTGCTTTCCAGGTAGTAAATACGC  850

seq1  CAACAC-TCAAGAGATAG-AAGAAGGGTGGCTAGAAGTAAGAGGATTAAT  895
      |||||| ||||||||||| ||||||||||||||||||||||||||||| |
seq2  CAACACTTCAAGAGATAGAAAGAAGGGTGGCTAGAAGTAAGAGGATTATT  900

seq1  AACTAGAGTGGTTTCTTAAAGGGTAAGTT-GTGACCCCAAAGGGGTTTAA  944
      | ||||||||||||||||||||||||||| |||||||||||||||||| |
seq2  ACCTAGAGTGGTTTCTTAAAGGGTAAGTTGGTGACCCCAAAGGGGTTT-A  949

seq1  GTAACAAAACGAGAGAGACTGCAAAACCCAATCAACA--GTGAAAAGCAA  992
      |||||||||||||||||||||| ||||||||||||||  |||||| ||| 
seq2  GTAACAAAACGAGAGAGACTGC-AAACCCAATCAACAGTGTGAAAGGCAT  998

seq1  CCCTGATTAACTTAGCAGG-GTCAGGAGAGACAAGTGCCCCTTTAAGCTG  1041
      | |||||| || |||||||  ||||   |||| |||| ||||||||||||
seq2  CTCTGATT-ACCTAGCAGGTTTCAGAGAAGAC-AGTGGCCCTTTAAGCTG  1046

seq1  ATGCTGGGAGCTTAGATTTGG-ATATCATAGCATACAGTTCTGAG-TTGA  1089
      ||||||||||| ||||||||| ||||||||||| ||||||||||| ||||
seq2  ATGCTGGGAGC-TAGATTTGGAATATCATAGCA-ACAGTTCTGAGCTTGA  1094

seq1  CATGGACAGCTAAGTGTTCTGGTGAAGAATGAGTC  1124
      ||||||| |||||  | |||||| |   |||||||
seq2  CATGGACCGCTAA--GGTCTGGTTA--GATGAGTC  1125