BAC Information

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BAC

Clone NameB6Ng01-229J09
Chromosome14 (Build37)
Map Location 25,310,772 - 25,311,996
singlet/doubletsinglet
Overlap geneRps24
Upstream geneKcnma1, LOC620499, Dlg5, LOC100039335, E330034G19Rik, LOC669325, Polr3a
Downstream geneLOC669315, LOC100039411, Zmiz1, I920194n01, LOC100039007
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229J09.bB6Ng01-229J09.g
ACCGA042685GA042686
length1,2181,023
definitionB6Ng01-229J09.b B6Ng01-229J09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcataccaaggagtaaatggactaaagaactcatgaaactggg
taaagtaactcccagtttgtggctagcctgtgctaaaggccatgcctcaa
ataaacaacccaatgaaacaaacaagaaaataactcagggtgggcaaccc
atgcctgtaatctcaccacgctggagacagaggaggtcagcctgggcgac
agtgagaagtcacctaaaagaatgaaataagccagccaggtgcatcctga
ccatcaaccaagcttgttacccattttggactacatgaagtttgtacatt
tttaaaggtaccatgtgtgcattgtatattgtatatggtaactttcccat
taaatgataccaacttttcctaggcatggacggcagcacggctcatacaa
aacagtgaggtatggcagtgcacacctgcaattccactacttagaaatag
aaagcccagtaaagactgctaagttccagttcagaaggccagagaaactg
catggagatgggctagtgggtaggtagaacaccacaagtttggcccaaac
tgcttattgtatcccaatatacactggaaaacaaaatctaacttgccatc
ctaactcagtccaggctgggattacaggcatgtatccattaaagaataag
atacctactcttgccagtctgtgtttaggctcattcttctttgcataatc
taaagaatcatagatcatgccaaagccagtggtcttgccaccaccgaagt
gggttctgaatccaaatacaaagatgacatctggtgtggttttgtacatt
ttggccagcttttcccgaatttctgtctttggtactgttgccttcccagg
atgaaggacatcaatgacctataaagaggtgtaagagtcagtactcctta
caagtttaactacattcttcaaaagcagacacaaagaccacattttgact
ctgatccttaccatctgtttctctgaagcagacggttggtcatgaacttc
ctggtcggatggttactgtgtcattctgcaggtaacaccacagtcagtag
atgttaaatctcggtctgcttgctcctggcctttcagcatttactagcat
gcagtctaggaagagcaagaaattgcgtacagccttataagtaaagaaaa
agggctaaaggctcaagcaggctcacggcctctaaacttacatgagcaca
cctcattttctcttacgt

gaattctataaagtatttgatttctttatttcttcccagaccaaattatc
gttgagcaagtagttgttcagtttccatgagtatgtgagctttccattgt
ctttgttgttattgaagtcctaccttactccataataatctgatagactg
tatgggattatttccatctttctgtaactgttgagtctgattatgtgctc
aattttggagatgtttccatgaggtgataaagaagaatgtatattatttt
tggtaaaatattctatagatatctgttcaatccatttggttcataacttc
tattagtttcactgtgtctctgtttagattctatttcactgacctgtcca
ttggtaagagtgggagcactattaatgtgtgaggttcaatgtgtgttttc
agttttagtaaagttttgtttatgaatgtattttctcttgcatttggggc
atagatgcttagaactgagacttcctcttggtggatttttcctttgatga
atatgaagtgtcctcccccatctcttttgataattcttggttgaaagtct
aatttattaaatattagaatgacaaccagcttgtttctagggaaaacttc
ctggagccttttactctgagggagtgtctgtctttgtcactttcttgtat
gcagcaaaattttgaatcctgtttatgcatccagtctgtaagcctatgtc
tttttattgggaaattgaatcctttgatgttgagaaatattaaagacaga
tgattgttcctgctatttttgttgctagaagtggcattagtgtgtgattc
tcttcttttgtgtttgttatgaaatgtttaatttcttgtgttttcttggg
tgttcttaccatttttgtgttggagattttcttctagtatcctctgtagg
actggattagtagaaaaatattgtttaaattggctttgtcatgtaatatt
atggtttctcatctatggtgattgagaggatttgttgggtatagaatcct
gggctgacaatataatgttctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_25310772_25311996
seq2: B6Ng01-229J09.b_47_1264 (reverse)

seq1  ACGTGAGAGAAAATGAGTTGT-TTTATGGTAGTTTATGAGGCGCTGTCGC  49
      |||| |||||||||||| |||  | |||  |||||| |||||  ||  ||
seq2  ACGTAAGAGAAAATGAGGTGTGCTCATGTAAGTTTA-GAGGCCGTG-AGC  48

seq1  CTGCTTTGGGGCTTTTTTGCCTTTTCTTTCCTTTATAGCTTGTCCCCAAT  99
      |||| ||| | ||||    | |||||||| |||   ||  ||| | ||||
seq2  CTGC-TTGAGCCTTTAGCCCTTTTTCTTTACTTATAAGGCTGTACGCAAT  97

seq1  TCCTGCCTCTTTCTAGACTGCATTGCTAGTAATTGCTGAAAGGCCA-GAG  148
      | ||  ||||| |||||||||| ||||||||| ||||||||||||| |||
seq2  TTCTTGCTCTTCCTAGACTGCA-TGCTAGTAAATGCTGAAAGGCCAGGAG  146

seq1  CAAAGGCAAGACGAGATTTTTAACATCTTACTGACTTGTGTGTTACCTGC  198
      |||  |||   |||||  ||||||||| ||||||||   |||||||||||
seq2  CAA--GCAGACCGAGA--TTTAACATC-TACTGACTGTGGTGTTACCTGC  191

seq1  AGAATGACACAGTAACCATCCGGACCAGGAAGTTCATGACCAACCGTCTG  248
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGAATGACACAGTAACCATCC-GACCAGGAAGTTCATGACCAACCGTCTG  240

seq1  CTTCAGAGGAAACAGATGGTAAGGATCAGAGTCAAAATGTGGTCTTTGTG  298
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGA-GAAACAGATGGTAAGGATCAGAGTCAAAATGTGGTCTTTGTG  289

seq1  TCTGCTTTTGAAG-ATGTAGTT-AACTTGTAAGGAGTACTGACTCTTACA  346
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  TCTGCTTTTGAAGAATGTAGTTAAACTTGTAAGGAGTACTGACTCTTACA  339

seq1  CCTCTTTATAGGTCATTGATGTCCTTCATCCTGGGAAGGCAACAGTACCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTATAGGTCATTGATGTCCTTCATCCTGGGAAGGCAACAGTACCA  389

seq1  AAGACAGAAATTCGGGAAAAGCTGGCCAAAATGTACAAAACCACACCAGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAAATTCGGGAAAAGCTGGCCAAAATGTACAAAACCACACCAGA  439

seq1  TGTCATCTTTGTATTTGGATTCAGAACCCACTTCGGTGGTGGCAAGACCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCTTTGTATTTGGATTCAGAACCCACTTCGGTGGTGGCAAGACCA  489

seq1  CTGGCTTTGGCATGATCTATGATTCTTTAGATTATGCAAAGAAGAATGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTTGGCATGATCTATGATTCTTTAGATTATGCAAAGAAGAATGAG  539

seq1  CCTAAACACAGACTGGCAAGAGTAGGTATCTTATTCTTTAATGGATACAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAACACAGACTGGCAAGAGTAGGTATCTTATTCTTTAATGGATACAT  589

seq1  GCCTGTAATCCCAGCCTGGACTGAGTTAGGATGGCAAGTTAGATTTTGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTAATCCCAGCCTGGACTGAGTTAGGATGGCAAGTTAGATTTTGTT  639

seq1  TTCCAGTGTATATTGGGATACAATAAGCAGTTTGGGCCAAACTTGTGGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTGTATATTGGGATACAATAAGCAGTTTGGGCCAAACTTGTGGTG  689

seq1  TTCTACCTACCCACTAGCCCATCTCCATGCAGTTTCTCTGGCCTTCTGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTACCCACTAGCCCATCTCCATGCAGTTTCTCTGGCCTTCTGAA  739

seq1  CTGGAACTTAGCAGTCTTTACTGGGCTTTCTATTTCTAAGTAGTGGAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAACTTAGCAGTCTTTACTGGGCTTTCTATTTCTAAGTAGTGGAATT  789

seq1  GCAGGTGTGCACTGCCATACCTCACTGTTTTGTATGAGCCGTGCTGCCGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGTGCACTGCCATACCTCACTGTTTTGTATGAGCCGTGCTGCCGT  839

seq1  CCATGCCTAGGAAAAGTTGGTATCATTTAATGGGAAAGTTACCATATACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCTAGGAAAAGTTGGTATCATTTAATGGGAAAGTTACCATATACA  889

seq1  ATATACAATGCACACATGGTACCTTTAAAAATGTACAAACTTCATGTAGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAATGCACACATGGTACCTTTAAAAATGTACAAACTTCATGTAGT  939

seq1  CCAAAATGGGTAACAAGCTTGGTTGATGGTCAGGATGCACCTGGCTGGCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGGGTAACAAGCTTGGTTGATGGTCAGGATGCACCTGGCTGGCT  989

seq1  TATTTCATTCTTTTAGGTGACTTCTCACTGTCGCCCAGGCTGACCTCCTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTCTTTTAGGTGACTTCTCACTGTCGCCCAGGCTGACCTCCTC  1039

seq1  TGTCTCCAGCGTGGTGAGATTACAGGCATGGGTTGCCCACCCTGAGTTAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAGCGTGGTGAGATTACAGGCATGGGTTGCCCACCCTGAGTTAT  1089

seq1  TTTCTTGTTTGTTTCATTGGGTTGTTTATTTGAGGCATGGCCTTTAGCAC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTTTGTTTCATTGGGTTGTTTATTTGAGGCATGGCCTTTAGCAC  1139

seq1  AGGCTAGCCACAAACTGGGAGTTACTTTACCCAGTTTCATGAGTTCTTTA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGCCACAAACTGGGAGTTACTTTACCCAGTTTCATGAGTTCTTTA  1189

seq1  GTCCATTTACTCCTTGGTATGATGAATTC  1225
      |||||||||||||||||||||||||||||
seq2  GTCCATTTACTCCTTGGTATGATGAATTC  1218


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