BAC Information

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BAC

Clone NameB6Ng01-230E13
Chromosome14 (Build37)
Map Location 97,397,981 - 97,531,538
singlet/doubletdoublet
Overlap genenone
Upstream geneKlhl1, LOC100043366, LOC668654
Downstream geneEG668659, Dach1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230E13.bB6Ng01-230E13.g
ACCGA043187GA043188
length7561,136
definitionB6Ng01-230E13.b B6Ng01-230E13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,397,981 - 97,398,736)(97,530,387 - 97,531,538)
sequence
gaattccctgtgtgtctgttaatatttgtttttatagttgaatacggaaa
gacccattctaccttaatattcagaacaaaatagaaaatatgacacttta
ctgaaacatttgttatgctttaattatatttatgatgcctaaatacaaaa
gtgcttagttggtttttatgatttaagggagcagacacttttgctcctca
accattcccaactcttcaacttacttcctgacacttaacatctaaatcta
ttgaatcctgctttttcatatagcattttcagggccttctcacgtttgtt
tgtttgtttctttgtttgacaagttctcattctgtagccttgtcttgcct
agaagtgtatttgtagctgtggtagccttcatctcccggagttccttctg
gtgtaacctctaaacaactggaattccaaacacgaatcaatatggttgtc
ttcatatgtgggcctctgcttcaaggttttctagcatttaagatgataac
gtttttagctgtaaaaataattttgaaggaaagaatgctttcttgagcag
ccattgtctctgcttgcttgatatagggtaggaccttacctgtctactgc
ttaagaccaataatactgttaaaaattgccaaagagcttccaaaatgtca
atttttgaccatggaagcatcaaacttctaacacgacctctcagtctgat
aaaatttattctcctctctctctctctctctctctctctctctctctctc
tctctc

gaattccagaacagccaggcagcaaaggctctgttacacagagaaactct
gtccaaaacaaaaaacaaaaaacaaaaaaacaaaaaacaaacaaacaaaa
aacacccaagaaaaacaaaaacctaagacaagtaaaattacaaagaagac
atcatgatattttcaggtaagtggatggaaatagaatacaataatcctga
gtgagattccacagacccagaagacaaatacaagaaggcaagatagacag
acaaacacacacacagaattgaaatcaacacattctttttttttaaatat
tagataaaagtgtaaagcttctttgcaaaacttgatttatccctttcatt
ctaggcttctgtcatctgtgctcctctagaagagagttaagttttatcac
acacttatccattttgtttatgctattcaagtatgcttgaattttatatc
tgacaggtgaccagtaaattaattagatggtactaacttatggtaggcat
tttttatatatatatttgatgaaaaatggatgctatgtatcagacggtta
caacctcttatcaatatctgtgccacgaatccttaatttataggaaggaa
cttagcagcagtgtatacctgagttaaggatctggggatgggatggtgag
ccttagctatcaaagcaatctcagtgtacttacagtggcgcttctacaag
aaagacaagaagatcaaagaactatccgccacaaagtataaacagcagtg
ggaatgatgccctttgaagatgcatgaaagatctctgagcaatactgtaa
ggtaagcatcttcagtgttccacacttgtgttctctgtattggtaagtcg
tgggactacacagacttagtagcagaagctatatttatcaatatccattg
ccaaatatagtcccaaatattctatgcagttaaaaaatatatcagtcaaa
actgattacttagttcgttctgggaaacaaacaaacaaacaaataaacaa
acaaactgcttgtagagaccactctatggaagtaatattgcaaggagttt
gctacggaaataagacatatgtaatagtgcatgctttgtagtccacacta
ttgaatgtctgattatttacgaatgttctgctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_97397981_97398736
seq2: B6Ng01-230E13.b_49_804

seq1  GAATTCCCTGTGTGTCTGTTAATATTTGTTTTTATAGTTGAATACGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGTGTGTCTGTTAATATTTGTTTTTATAGTTGAATACGGAAA  50

seq1  GACCCATTCTACCTTAATATTCAGAACAAAATAGAAAATATGACACTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATTCTACCTTAATATTCAGAACAAAATAGAAAATATGACACTTTA  100

seq1  CTGAAACATTTGTTATGCTTTAATTATATTTATGATGCCTAAATACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACATTTGTTATGCTTTAATTATATTTATGATGCCTAAATACAAAA  150

seq1  GTGCTTAGTTGGTTTTTATGATTTAAGGGAGCAGACACTTTTGCTCCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTAGTTGGTTTTTATGATTTAAGGGAGCAGACACTTTTGCTCCTCA  200

seq1  ACCATTCCCAACTCTTCAACTTACTTCCTGACACTTAACATCTAAATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCCCAACTCTTCAACTTACTTCCTGACACTTAACATCTAAATCTA  250

seq1  TTGAATCCTGCTTTTTCATATAGCATTTTCAGGGCCTTCTCACGTTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCTGCTTTTTCATATAGCATTTTCAGGGCCTTCTCACGTTTGTT  300

seq1  TGTTTGTTTCTTTGTTTGACAAGTTCTCATTCTGTAGCCTTGTCTTGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTCTTTGTTTGACAAGTTCTCATTCTGTAGCCTTGTCTTGCCT  350

seq1  AGAAGTGTATTTGTAGCTGTGGTAGCCTTCATCTCCCGGAGTTCCTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGTATTTGTAGCTGTGGTAGCCTTCATCTCCCGGAGTTCCTTCTG  400

seq1  GTGTAACCTCTAAACAACTGGAATTCCAAACACGAATCAATATGGTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACCTCTAAACAACTGGAATTCCAAACACGAATCAATATGGTTGTC  450

seq1  TTCATATGTGGGCCTCTGCTTCAAGGTTTTCTAGCATTTAAGATGATAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGTGGGCCTCTGCTTCAAGGTTTTCTAGCATTTAAGATGATAAC  500

seq1  GTTTTTAGCTGTAAAAATAATTTTGAAGGAAAGAATGCTTTCTTGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAGCTGTAAAAATAATTTTGAAGGAAAGAATGCTTTCTTGAGCAG  550

seq1  CCATTGTCTCTGCTTGCTTGATATAGGGTAGGACCTTACCTGTCTACTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCTCTGCTTGCTTGATATAGGGTAGGACCTTACCTGTCTACTGC  600

seq1  TTAAGACCAATAATACTGTTAAAAATTGCCAAAGAGCTTCCAAAATGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACCAATAATACTGTTAAAAATTGCCAAAGAGCTTCCAAAATGTCA  650

seq1  ATTTTTGACCATGGAAGCATCAAACTTCTAACACGACCTCTCAGTCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGACCATGGAAGCATCAAACTTCTAACACGACCTCTCAGTCTGAT  700

seq1  AAAATTTATTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  750

seq1  TCTCTC  756
      ||||||
seq2  TCTCTC  756


seq1: chr14_97530387_97531538
seq2: B6Ng01-230E13.g_68_1203 (reverse)

seq1  AAACAGCAGAAACATCGTAAATAAATTCAGAACATTTAAATAGTGTGGAC  50
      |||||||||||   ||||||||||  |||| ||| || ||||||||||||
seq2  AAACAGCAGAACATTCGTAAATAA--TCAG-ACA-TTCAATAGTGTGGAC  46

seq1  TACCAAAGCATGCACTTATTACATTATTGTCTTTTTTTTTCTGTTAGCAA  100
      || |||||||||||| ||||||||   ||||   || |||| | |||| |
seq2  TA-CAAAGCATGCAC-TATTACAT--ATGTC---TTATTTCCG-TAGC-A  87

seq1  AACTCCTGCAAATAATTACTTCCATAGAGT-GTCTCTACAAGCAGTTTGT  149
      |||||||   ||| |||||||||||||||| |||||||||||||||||||
seq2  AACTCCTTGCAAT-ATTACTTCCATAGAGTGGTCTCTACAAGCAGTTTGT  136

seq1  TTGTTTATTTGTTTGTTTGTTTGTTTTCCCAGAACGAACTAAGTAATCAG  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTGTTTATTTGTTTGTTTGTTTG-TTTCCCAGAACGAACTAAGTAATCAG  185

seq1  TTTTTGACTGATATATTTTTTTAACTGCATAGAATATTTGGGACTATATT  249
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  -TTTTGACTGATATA-TTTTTTAACTGCATAGAATATTTGGGACTATATT  233

seq1  TGGCAATGGATATTGATAAATATAGCTTCTGCTACTAAGTCTGTGTAGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATGGATATTGATAAATATAGCTTCTGCTACTAAGTCTGTGTAGTC  283

seq1  CCACGACTTACCAATACAGAGAACACAAGTGTGGAACACTGAAGATGCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGACTTACCAATACAGAGAACACAAGTGTGGAACACTGAAGATGCTT  333

seq1  ACCTTACAGTATTGCTCAGAGATCTTTCATGCATCTTCAAAGGGCATCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACAGTATTGCTCAGAGATCTTTCATGCATCTTCAAAGGGCATCAT  383

seq1  TCCCACTGCTGTTTATACTTTGTGGCGGATAGTTCTTTGATCTTCTTGTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTGCTGTTTATACTTTGTGGCGGATAGTTCTTTGATCTTCTTGTC  433

seq1  TTTCTTGTAGAAGCGCCACTGTAAGTACACTGAGATTGCTTTGATAGCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTAGAAGCGCCACTGTAAGTACACTGAGATTGCTTTGATAGCTA  483

seq1  AGGCTCACCATCCCATCCCCAGATCCTTAACTCAGGTATACACTGCTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACCATCCCATCCCCAGATCCTTAACTCAGGTATACACTGCTGCT  533

seq1  AAGTTCCTTCCTATAAATTAAGGATTCGTGGCACAGATATTGATAAGAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCTTCCTATAAATTAAGGATTCGTGGCACAGATATTGATAAGAGG  583

seq1  TTGTAACCGTCTGATACATAGCATCCATTTTTCATCAAATATATATATAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACCGTCTGATACATAGCATCCATTTTTCATCAAATATATATATAA  633

seq1  AAAATGCCTACCATAAGTTAGTACCATCTAATTAATTTACTGGTCACCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCTACCATAAGTTAGTACCATCTAATTAATTTACTGGTCACCTG  683

seq1  TCAGATATAAAATTCAAGCATACTTGAATAGCATAAACAAAATGGATAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATAAAATTCAAGCATACTTGAATAGCATAAACAAAATGGATAAG  733

seq1  TGTGTGATAAAACTTAACTCTCTTCTAGAGGAGCACAGATGACAGAAGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATAAAACTTAACTCTCTTCTAGAGGAGCACAGATGACAGAAGCC  783

seq1  TAGAATGAAAGGGATAAATCAAGTTTTGCAAAGAAGCTTTACACTTTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGAAAGGGATAAATCAAGTTTTGCAAAGAAGCTTTACACTTTTAT  833

seq1  CTAATATTTAAAAAAAAAGAATGTGTTGATTTCAATTCTGTGTGTGTGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATTTAAAAAAAAAGAATGTGTTGATTTCAATTCTGTGTGTGTGTT  883

seq1  TGTCTGTCTATCTTGCCTTCTTGTATTTGTCTTCTGGGTCTGTGGAATCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTATCTTGCCTTCTTGTATTTGTCTTCTGGGTCTGTGGAATCT  933

seq1  CACTCAGGATTATTGTATTCTATTTCCATCCACTTACCTGAAAATATCAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGATTATTGTATTCTATTTCCATCCACTTACCTGAAAATATCAT  983

seq1  GATGTCTTCTTTGTAATTTTACTTGTCTTAGGTTTTTGTTTTTCTTGGGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTTCTTTGTAATTTTACTTGTCTTAGGTTTTTGTTTTTCTTGGGT  1033

seq1  GTTTTTTGTTTGTTTGTTTTTTGTTTTTTTGTTTTTTGTTTTTTGTTTTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGTTTGTTTGTTTTTTGTTTTTTTGTTTTTTGTTTTTTGTTTTG  1083

seq1  GACAGAGTTTCTCTGTGTAACAGAGCCTTTGCTGCCTGGCTGTTCTGGAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGTTTCTCTGTGTAACAGAGCCTTTGCTGCCTGGCTGTTCTGGAA  1133

seq1  TTC  1152
      |||
seq2  TTC  1136


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