BAC Information

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BAC

Clone NameB6Ng01-232B04
Chromosome14 (Build37)
Map Location 37,274,853 - 37,432,327
singlet/doubletdoublet
Overlap genenone
Upstream geneGrid1, 4930596D02Rik, LOC100040277, LOC665933, 4930474N05Rik
Downstream geneGcap14, LOC100040341, LOC670331, Rgr, Lrrc21, Lrrc22, Pcdh21, 2610528A11Rik, Ghitm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232B04.bB6Ng01-232B04.g
ACCGA044500GA044501
length1,089408
definitionB6Ng01-232B04.b B6Ng01-232B04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,431,235 - 37,432,327)(37,274,853 - 37,275,266)
sequence
gaattcttcaaattaattcaagtggaagcaaagtgttaactgaaacccat
cgcctctaacttgactaaacctctttctcagacaggcttcaatgtgaaga
agaccattgttgggctcctacccttgcacagagttactcctgctgccact
ctggcattcatgtctcatctgtctcctaccaactaattacagatggatgg
catagaaccccaaaatgacagtcttgttgatcaggtccttgtaataccct
ccgatgtgtagttgtctgaactactgtcagaggtaaagctctgtctgctg
ggtttcactttatcacttataaccatgaagaagccctaaaatgtgggtaa
caattgctttcacaaaacttagtaaacttcacctaaaattttatgtattt
cttggttcaccttcttatcacacaagaccatgcacacaatctgtaataca
cagcttctctggattttctttcttctcctttttttttaagtttctatata
gataaggatactttgtgagtgaaatagactccacctaagccaatctaggt
taaacacaagtgagtgtgggatttgatagttttggagtgcaaagttaaag
agtagagttggctcaggaaggaagtgactcaaaattaccaaaataccatt
agggaaatgatcacagcacaaaaactatgaggaaaccaagttttctcctg
tgttctatgttgcctgtggatttaaaaaaaaaaaaaaaaaaaaaaaacct
ccctcagatggcttgcctctgggtttttctcaggcaggtgttttctacat
ttaggcaagatggttctaaaagtttggactttataactgactagcccgat
gcacaggcagcagaaattctcttttcaaaccctcctggggatcccttaag
cttgattctggaaaatgcctcagctgggttaccaggcttgctctgacccc
ttgattatgaatcagccacatggcggactcatgctttgatcagagaatgt
gctgggctcactaagacatgttcgggtcagagggagaaagtttgagggaa
tgagctccgatactaaagaatgaatatgtagacagaaaa
actttacttactgatcaatgccctaaacacaactgtgcttttcagatgcc
tgagatcatggtcactccataactatattataaatctatgtttctctgta
agaattcttctaagagtatgtagaggtagaattagaattatattctcagg
gaaaaatctttgattcttcacaaaggaatgtctactttggagaaagaaaa
tgtgttttgttcagcaattagctccttgtttcctgtcttttcaacataga
tgtgcactgaaggaagaagaagaagaagaagaagaagaagaagaagaaga
agaagaagaagaagaagaagaagaagaagaagaggaagaagaggaagaag
aggaagaagaggaggaggaggaggaggaggaagaagaagaaaagaaggag
gaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_37431235_37432327
seq2: B6Ng01-232B04.b_47_1135 (reverse)

seq1  TTTTCTGTCTACAATTATTTCCATTTCTTTTAGTATCGGAGCTCATTTTC  50
      |||||||||||||  ||||  ||||   |||||||||||||||||  |||
seq2  TTTTCTGTCTACA--TATT--CATT--CTTTAGTATCGGAGCTCA--TTC  42

seq1  CCTCAAACTTTCTCCCTCTGA-CCGAACATGTCTTAGTGAGCCCAAGCAC  99
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  CCTCAAACTTTCTCCCTCTGACCCGAACATGTCTTAGTGAGCCC-AGCAC  91

seq1  ATTCTCTGATCAAAGCATGAGTCCG-CATGTGGCTGATTCAT-ATC-AGG  146
      ||||||||||||||||||||||||| |||||||||||||||| ||| |||
seq2  ATTCTCTGATCAAAGCATGAGTCCGCCATGTGGCTGATTCATAATCAAGG  141

seq1  GGTCAGAGCAAGCCTGGTAACCCAGCTGA-GCATTTTCCAG-ATCAAGCT  194
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  GGTCAGAGCAAGCCTGGTAACCCAGCTGAGGCATTTTCCAGAATCAAGCT  191

seq1  TTAGGGATCCCCAGGAGGGTTTGAAAAGAGAATTTCTGCTGCCTGTGCAT  244
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGATCCCCAGGAGGGTTTGAAAAGAGAATTTCTGCTGCCTGTGCAT  241

seq1  CGGGCTAGTCAGTTAT-AAGTCC-AACTTTTAGAACCATCTTGCCTAAAT  292
      |||||||||||||||| |||||| ||||||||||||||||||||||||||
seq2  CGGGCTAGTCAGTTATAAAGTCCAAACTTTTAGAACCATCTTGCCTAAAT  291

seq1  GTAGAAAACACCTGCCTGAGAAAAACCCAGAGGCAAGCCATCTGAGGGAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAACACCTGCCTGAGAAAAACCCAGAGGCAAGCCATCTGAGGGAG  341

seq1  GTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATCCACAGGCAACATAGAAC  392
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  G---TTTTTTTTTTTTTTTTTTTTTTTTAAATCCACAGGCAACATAGAAC  388

seq1  ACAGGAGAAAACTTGGTTTCCTCATAGTTTTTGTGCTGTGATCATTTCCC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAAAACTTGGTTTCCTCATAGTTTTTGTGCTGTGATCATTTCCC  438

seq1  TAATGGTATTTTGGTAATTTTGAGTCACTTCCTTCCTGAGCCAACTCTAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTATTTTGGTAATTTTGAGTCACTTCCTTCCTGAGCCAACTCTAC  488

seq1  TCTTTAACTTTGCACTCCAAAACTATCAAATCCCACACTCACTTGTGTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACTTTGCACTCCAAAACTATCAAATCCCACACTCACTTGTGTTT  538

seq1  AACCTAGATTGGCTTAGGTGGAGTCTATTTCACTCACAAAGTATCCTTAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGATTGGCTTAGGTGGAGTCTATTTCACTCACAAAGTATCCTTAT  588

seq1  CTATATAGAAACTTAAAAAAAAAGGAGAAGAAAGAAAATCCAGAGAAGCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATAGAAACTTAAAAAAAAAGGAGAAGAAAGAAAATCCAGAGAAGCT  638

seq1  GTGTATTACAGATTGTGTGCATGGTCTTGTGTGATAAGAAGGTGAACCAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTACAGATTGTGTGCATGGTCTTGTGTGATAAGAAGGTGAACCAA  688

seq1  GAAATACATAAAATTTTAGGTGAAGTTTACTAAGTTTTGTGAAAGCAATT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACATAAAATTTTAGGTGAAGTTTACTAAGTTTTGTGAAAGCAATT  738

seq1  GTTACCCACATTTTAGGGCTTCTTCATGGTTATAAGTGATAAAGTGAAAC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCACATTTTAGGGCTTCTTCATGGTTATAAGTGATAAAGTGAAAC  788

seq1  CCAGCAGACAGAGCTTTACCTCTGACAGTAGTTCAGACAACTACACATCG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGACAGAGCTTTACCTCTGACAGTAGTTCAGACAACTACACATCG  838

seq1  GAGGGTATTACAAGGACCTGATCAACAAGACTGTCATTTTGGGGTTCTAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTATTACAAGGACCTGATCAACAAGACTGTCATTTTGGGGTTCTAT  888

seq1  GCCATCCATCTGTAATTAGTTGGTAGGAGACAGATGAGACATGAATGCCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCATCTGTAATTAGTTGGTAGGAGACAGATGAGACATGAATGCCA  938

seq1  GAGTGGCAGCAGGAGTAACTCTGTGCAAGGGTAGGAGCCCAACAATGGTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCAGCAGGAGTAACTCTGTGCAAGGGTAGGAGCCCAACAATGGTC  988

seq1  TTCTTCACATTGAAGCCTGTCTGAGAAAGAGGTTTAGTCAAGTTAGAGGC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACATTGAAGCCTGTCTGAGAAAGAGGTTTAGTCAAGTTAGAGGC  1038

seq1  GATGGGTTTCAGTTAACACTTTGCTTCCACTTGAATTAATTTGAAGAATT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTTTCAGTTAACACTTTGCTTCCACTTGAATTAATTTGAAGAATT  1088

seq1  C  1093
      |
seq2  C  1089

seq1: chr14_37274853_37275266
seq2: B6Ng01-232B04.g_70_483

seq1  GAATTCACTTTACTTACAGATCAATGCCCTAAACACAACTGTGCTTTTCA  50
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTACTTACTGATCAATGCCCTAAACACAACTGTGCTTTTCA  50

seq1  GATGCCTGAGATCATGGTCACTCCATAACTATATTATAAATCTATGTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCTGAGATCATGGTCACTCCATAACTATATTATAAATCTATGTTTC  100

seq1  TCTGTAAGAATTCTTCTAAGAGTATGTAGAGGTAGAATTAGAATTATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGAATTCTTCTAAGAGTATGTAGAGGTAGAATTAGAATTATATT  150

seq1  CTCAGGGAAAAATCTTTGATTCTTCACAAAGGAATGTCTACTTTGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAAAAATCTTTGATTCTTCACAAAGGAATGTCTACTTTGGAGAA  200

seq1  AGAAAATGTGTTTTGTTCAGCAATTAGCTCCTTGTTTCCTGTCTTTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGTGTTTTGTTCAGCAATTAGCTCCTTGTTTCCTGTCTTTTCAA  250

seq1  CATAGATGTGCACTGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGTGCACTGAAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  300

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAGG  350

seq1  AAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAAG  400

seq1  AAGGAGGAGGAGGA  414
      ||||||||||||||
seq2  AAGGAGGAGGAGGA  414