MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-233H12
Chromosome	14 (Build37)
Map Location	78,750,599 - 78,948,416
singlet/doublet	doublet
Overlap gene	LOC219180, Akap11
Upstream gene	D230005D02Rik, EG629678, Gm1587, Dnajc15, Epsti1, AU021034, Tnfsf11
Downstream gene	Dgkh, LOC673649, 1300010F03Rik, LOC629709, LOC100043765, AU017455, 1190002H23Rik, Narg1l, Mtrf1, Kbtbd7, EG432879, Wbp4, Elf1, LOC668560
Link	Open Mouse BAC browser

Click to get alignment info.

name	D230005D02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239188 MGI:2444896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629678 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629678 MGI:3647788
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm1587 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380920 MGI:2686433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dnajc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66148 MGI:1913398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epsti1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108670 MGI:1915168
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	AU021034 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219170 MGI:2145738
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tnfsf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21943 MGI:1100089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC219180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:219180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Akap11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219181 MGI:2684060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 149 ESTs, 3 Proteins

name	Dgkh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380921 MGI:2444188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC673649 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673649
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	1300010F03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219189 MGI:1919008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 75 ESTs, 2 Proteins

name	LOC629709 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs, 4 Proteins pseudo : _no_value

name	LOC100043765 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	AU017455 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105590 MGI:2145729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1190002H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66214 MGI:1913464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Narg1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66897 MGI:1914147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtrf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211253 MGI:2384815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kbtbd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211255 MGI:2685141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432879 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432879 MGI:3643058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wbp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22380 MGI:109568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Elf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13709 MGI:107180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668560 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668560
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	D230005D02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385662 GeneID:239188 MGI:2444896
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D230005D02 gene transcript_id : NM_172813.2

name	EG629678 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702321 GeneID:629678 MGI:3647788
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG629678 transcript_id : NM_001037935.1

name	Gm1587 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345793 GeneID:380920 MGI:2686433
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 1587, (NCBI) transcript_id : NM_001033440.2

name	Dnajc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982148 GeneID:66148 MGI:1913398
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DnaJ (Hsp40) homolog, subfamily C, member 15 transcript_id : NM_025384.3

name	Epsti1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30519880 GeneID:108670 MGI:1915168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial stromal interaction 1 (breast) transcript_id : NM_029495.1

name	Epsti1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363869 GeneID:108670 MGI:1915168
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : epithelial stromal interaction 1 (breast) transcript_id : NM_178825.2

name	AU021034 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802982 GeneID:219170 MGI:2145738
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU021034 transcript_id : NM_177629.3

name	Tnfsf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114842414 GeneID:21943 MGI:1100089
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor necrosis factor (ligand) superfamily, member 11 transcript_id : NM_011613.3

name	Akap11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265811 GeneID:219181 MGI:2684060
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 149 ESTs, 3 Proteins product : A kinase (PRKA) anchor protein 11 transcript_id : XM_001002157.2

name	Dgkh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486740 GeneID:380921 MGI:2444188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : diacylglycerol kinase, eta transcript_id : NM_001081336.1

name	1300010F03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265813 GeneID:219189 MGI:1919008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 75 ESTs, 2 Proteins product : RIKEN cDNA 1300010F03 gene transcript_id : XM_001002205.2

name	LOC100043765 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265816 GeneID:100043765
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100043765 transcript_id : XM_001480920.1

name	AU017455 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380837 GeneID:105590 MGI:2145729
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AU017455 transcript_id : NM_001033215.2

name	1190002H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:127138619 GeneID:66214 MGI:1913464
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1190002H23 gene transcript_id : NM_025427.2

name	Narg1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328273 GeneID:66897 MGI:1914147
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NMDA receptor regulated 1-like transcript_id : NM_025832.2

name	Mtrf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357946 GeneID:211253 MGI:2384815
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial translational release factor 1 transcript_id : NM_145960.3

name	Kbtbd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:67625734 GeneID:211255 MGI:2685141
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch repeat and BTB (POZ) domain containing 7 transcript_id : NM_001024135.1

name	EG432879 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802323 GeneID:432879 MGI:3643058
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432879 transcript_id : NM_001034882.2

name	Wbp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286863 GeneID:22380 MGI:109568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WW domain binding protein 4 transcript_id : NM_018765.3

name	Elf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131095 GeneID:13709 MGI:107180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : E74-like factor 1 transcript_id : NM_007920.3

name	EG629678 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702322 GeneID:629678 MGI:3647788
definition	codon_start : 1 product : hypothetical protein LOC629678 protein_id : NP_001033024.1

name	D230005D02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370212 CCDS:CCDS27290.1 GeneID:239188 MGI:2444896
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC239188 protein_id : NP_766401.1

name	Gm1587 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701957 GeneID:380920 MGI:2686433
definition	codon_start : 1 product : hypothetical protein LOC380920 protein_id : NP_001028612.1

name	Dnajc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384760 CCDS:CCDS27292.1 GeneID:66148 MGI:1913398
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0031072 - heat shock protein binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 product : DnaJ (Hsp40) homolog, subfamily D, member 1 protein_id : NP_079660.1

name	Epsti1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519881 GeneID:108670 MGI:1915168
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform a is encoded by transcript variant a product : epithelial stromal interaction 1 isoform a protein_id : NP_083771.1

name	Epsti1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281909 GeneID:108670 MGI:1915168
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform b is encoded by transcript variant b product : epithelial stromal interaction 1 isoform b protein_id : NP_849147.1

name	AU021034 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244020 CCDS:CCDS27293.1 GeneID:219170 MGI:2145738
definition	codon_start : 1 product : hypothetical protein LOC219170 protein_id : NP_808297.1

name	Tnfsf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114842415 CCDS:CCDS27294.1 GeneID:21943 MGI:1100089
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005164 - tumor necrosis factor receptor binding [Evidence IEA] GO_process : GO:0045453 - bone resorption [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0048535 - lymph node development [Evidence TAS]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0001503 - ossification [Evidence IMP]; GO:0030316 - osteoclast differentiation [Evidence IGI] [Evidence IDA]; GO:0045672 - positive regulation of osteoclast differentiation [Evidence IDA]; GO:0051260 - protein homooligomerization [Evidence IDA]; GO:0045670 - regulation of osteoclast differentiation [Evidence IDA] codon_start : 1 note : OPG ligand; osteoprotegerin ligand; osteoclast differentiation factor; receptor activator of NF-kappaB ligand; tumor necrosis factor-related activation-induced cytokine product : tumor necrosis factor (ligand) superfamily, member 11 protein_id : NP_035743.2

name	Akap11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265812 GeneID:219181 MGI:2684060
definition	codon_start : 1 product : similar to A-kinase anchoring protein 220 protein_id : XP_001002157.2

name	Dgkh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486741 GeneID:380921 MGI:2444188
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005768 - endosome [Evidence ISS] GO_function : GO:0004143 - diacylglycerol kinase activity [Evidence ISS] [Evidence IEA]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0046339 - diacylglycerol metabolism [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007205 - protein kinase C activation [Evidence IEA] codon_start : 1 product : diacylglycerol kinase, eta protein_id : NP_001074805.1

name	1300010F03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265814 GeneID:219189 MGI:1919008
definition	codon_start : 1 product : hypothetical protein LOC219189 protein_id : XP_001002205.2

name	LOC100043765 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265817 GeneID:100043765
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480970.1

name	AU017455 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701614 GeneID:105590 MGI:2145729
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC105590 protein_id : NP_001028387.1

name	1190002H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:127138620 GeneID:66214 MGI:1913464
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030295 - protein kinase activator activity [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence ISS] codon_start : 1 product : response gene to complement 32 protein_id : NP_079703.2

name	Narg1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313242 CCDS:CCDS27296.1 GeneID:66897 MGI:1914147
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : NMDA receptor regulated 1-like protein_id : NP_080108.1

name	Mtrf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981857 CCDS:CCDS27297.1 GeneID:211253 MGI:2384815
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0003747 - translation release factor activity [Evidence IEA]; GO:0016149 - translation release factor activity, codon specific [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006415 - translational termination [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial translational release factor 1 protein_id : NP_666072.2

name	Kbtbd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67625735 CCDS:CCDS27298.1 GeneID:211255 MGI:2685141
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : kelch repeat and BTB (POZ) domain containing 7-like product : kelch repeat and BTB (POZ) domain containing 7-like protein protein_id : NP_001019306.1

name	EG432879 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702226 CCDS:CCDS27299.1 GeneID:432879 MGI:3643058
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC432879 protein_id : NP_001030054.1

name	Wbp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84871981 CCDS:CCDS27300.1 GeneID:22380 MGI:109568
definition	GO_component : GO:0005681 - spliceosome complex [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA] codon_start : 1 note : formin binding protein 21 product : WW domain binding protein 4 protein_id : NP_061235.2

name	Elf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679627 CCDS:CCDS27301.1 GeneID:13709 MGI:107180
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0050860 - negative regulation of T cell receptor signaling pathway [Evidence IGI]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0001817 - regulation of cytokine production [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : E74-like factor 1 protein_id : NP_031946.1

name	LOC673649 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673649
definition	number : 1 pseudo : _no_value

name	LOC673649 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673649
definition	number : 2 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 1 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 2 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 3 pseudo : _no_value

name	LOC668560 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668560
definition	number : 4 pseudo : _no_value

name	LOC219180 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265692 GeneID:219180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034373.1

name	LOC629709 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265815 GeneID:629709
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 103 ESTs, 4 Proteins product : similar to Mitochondrial ribosomal protein L22 pseudo : _no_value transcript_id : XR_034909.1

clone name	MSMg01-509G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059G13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-298L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480I16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250F13
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-233H12.b	B6Ng01-233H12.g
ACC	GA045522	GA045523
length	905	1,067
definition	B6Ng01-233H12.b	B6Ng01-233H12.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(78,750,599 - 78,751,496)	(78,947,351 - 78,948,416)
sequence	gaattccagaggtaatccagttaggtcaacaccggcttgaaaatgtctgt atcgccaatggtttctcttggggctttgagattgcaccatctgtgggctc agagttgaaggaggggtgttgccttggcacatgagtggacagacttagta gctgagagaggaatgacaagatgacgagctcatcctggaggtgacctggc cctggctgtggcagcaagatcccaggagaagaggaaaacttggtgcttgt ggagatgacagtggtggtgaagatgaagatgatggtgattttgatgaagt agaagaaaaatcaccagcgagtacatctctatgagacctccctgcggaaa ggacataaaatcaagtcagagcagagagggctgaaaactatcagcatcga aggtcaaggacccttcaaaaacaagcaggggagggtcttcctaaaatacc caaaggacctggttctacagaacacatcaaaaaggagaaatcagaagagt ccaaataaggatagaccgtactgatatccaaaataaagtttctatttcat tctctttaaaaatccttttcatttgcttgattttatttttatttttacat tagtagatgcattatactatgcaatcattgttactgaaaagacatttgtt aaatgtaatgccatttttaacagttctataaatgtgtataaaataatata ttatcattttcatcacctttacccttcaccccatattttccccaaccaac ctcccatcgacttccacatttttttttaaattttgatccaatgagtttct tcggtgtcgcaggtataatggagcagctgtggggagttgttttctagaaa catgaactatttgctagtggtctacaccgctaaagaaaagtgaggcctac tccct	gaattccttgtctgctcttggcttggttgcaatttctcaggccaaggccc cagaaagcatatgaaaatagtgaatcagaagatactgtggatcagcagaa atatgcttggactccagctaatgcctatttcccaattctgtgacagttcc ttgggagtcactaataataaggcctggtttctcactgcgtttaagtggca ttgtgatcaaactggttttgtggaaactactctatggagttaactggcta ataggttagcctgttaggggaatttatctctcatggagttcctgacaaat ggtttcttagaaattcttgaggagagtcaaatccttgggatagaaggtga aggttaaagaactctgtaggaacgagaggctgcaggaattccagcattcc cggtccctggttgtatgatcttgctttcggttgctgtgatagaacagcac gaccaaggcaacttatagaaggaggagttatttgggcttattcttccaga aagatgaatccaccagtcgtaggaggcatggcaggaagctgagagaccac atatttatcagcatgcataaagcagaaagactgaactgaaagagaaatag ggctatgtactctcaaagcctagctccagtgacatacttcctctagaatg gccagctaaatcgccccacagtgccaccagttggggcagtgtccaaatgc ctgagcctgagcaggacatctttctatccgaaccaccacacccagtcttt cccatcagtgctcaaaagattttagatggcttgcagagatgaagtgtctg cctcttagcatccgtgtttggattgtatttgctgaagtttgtctgattct agcggggttcacgattctgatatgacatgaactacatggaccttgtgtgt tctgagataaaaaatggatgacatttaataagtgagttagatggagagag gaagatgattgggttattttgggtggaagaaagagaggtactgacaatac tttcttagggtttggcctactattctcagatcagctaatcagagacattt ggagagccatacaagaa
quality values	Open. Hide. 58 33 25 32 58 58 26 10 54 58 58 58 54 58 40 36 58 37 28 58 62 62 62 62 54 62 41 42 62 62 56 43 38 30 20 26 26 46 30 17 26 32 46 44 62 56 62 62 62 62 62 54 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 33 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 62 59 59 62 62 62 54 42 62 62 62 62 62 59 59 59 59 59 62 62 62 62 59 62 59 62 62 62 62 59 59 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 59 59 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 47 59 59 49 56 59 59 56 59 62 62 59 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 49 50 38 51 56 56 51 62 62 62 56 62 62 62 62 56 62 62 47 54 62 62 62 62 56 62 44 56 46 46 56 56 54 51 62 62 62 62 62 56 62 62 62 62 56 62 62 62 54 47 62 62 56 62 62 62 56 62 42 38 37 28 38 56 56 41 56 47 41 56 54 54 62 62 56 47 47 54 62 62 62 56 62 56 62 31 36 62 62 62 62 62 62 62 62 48 48 62 52 62 47 62 62 43 62 62 62 62 54 54 47 62 62 54 62 43 49 42 46 46 50 62 62 52 53 54 62 26 41 54 52 45 45 48 40 39 47 47 52 52 58 58 54 54 54 36 24 52 52 54 58 54 54 54 54 58 58 58 58 54 52 54 58 54 54 28 58 58 52 58 58 58 58 32 35 54 54 58 54 54 45 47 54 58 58 42 50 39 52 54 31 42 54 50 58 54 54 58 58 58 58 53 51 58 29 23 28 50 49 54 51 50 51 50 54 26 42 42 45 37 50 47 50 51 49 47 50 40 54 58 52 42 42 53 53 51 58 58 43 32 44 51 54 50 51 58 58 32 51 36 51 53 44 33 51 50 49 50 43 50 30 52 51 36 36 39 30 26 36 34 32 51 32 39 33 52 51 39 35 24 46 54 58 54 31 36 29 50 39 39 39 39 43 42 39 28 34 30 33 50 47 35 54 49 32 53 32 50 40 34 52 18 31 42 26 24 29 33 46 54 51 39 21 26 54 46 49 42 20 53 39 29 17 17 11 19 30 19 16 37 42 28 19 34 24 18 40 42 39 34 37 29 25 41 30 44 25 40 40 19 22 33 32 33 24 53 20 27 41 16 37 34 30 37 33 29 32 35 23 33 16 24 21 32 35 40 51 51 53 42 47 40 41 13 10 36 34 42 31 45 34 29 37 39 33 31 18 33 32 32 37 24 53 53 45 53 39 18 11 9 25 32 53 15 21 24 33 9 10 27 14 15 41 31 14 17 21 8 17 23 21 16 12 16 31 25 13 9 51 46 8 13 29 30 14 31 19 51 33 51 19 15 18 6 13 28 13 20 31 27 13 22 31 22 13 30 19 38 31 23 25 11 24 23 12 11 18 9 14 17 14 31 15 31 31 18 27 31 19 35 22 9 21 37 27 27 24 25 31 28 6 31 11 18 29 16 17 39 14 30 31 6	Open. Hide. 62 47 42 39 62 62 62 62 62 62 27 42 22 18 18 21 41 26 41 43 37 49 49 49 62 62 62 62 62 62 51 62 62 62 62 62 62 59 59 62 62 62 59 47 62 62 62 62 62 62 62 62 59 59 62 62 59 59 50 38 38 43 56 62 59 59 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 59 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 54 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 54 54 62 62 62 47 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 54 62 62 62 47 52 62 62 47 54 62 47 62 62 62 62 62 62 62 62 62 62 54 62 62 38 62 54 36 58 58 54 58 58 52 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 58 36 29 42 58 58 58 54 58 26 58 58 54 54 54 45 32 58 58 54 58 58 54 54 58 58 47 58 54 26 58 58 54 54 58 58 58 52 54 58 49 52 52 58 58 58 54 35 58 47 42 31 54 48 58 52 54 53 46 58 58 49 51 51 50 52 58 39 53 58 53 53 58 39 58 51 58 51 51 37 58 58 47 50 51 48 49 51 58 50 51 58 58 58 58 48 37 58 30 54 58 51 53 53 53 58 58 37 53 53 53 52 50 50 51 58 51 58 51 58 41 58 52 51 58 47 54 39 54 52 50 54 32 53 52 58 51 40 32 51 39 52 53 52 42 51 41 50 41 39 29 39 33 39 58 44 26 58 41 53 51 39 42 58 54 42 40 52 51 43 41 58 32 58 41 35 31 53 51 39 18 44 58 39 53 49 41 39 54 54 32 29 39 38 50 53 42 42 49 28 54 37 40 49 29 54 50 49 46 18 39 31 49 53 53 22 53 32 29 49 29 26 31 45 37 54 54 34 37 37 32 45 53 54 28 53 47 23 27 29 36 28 16 34 26 37 44 44 33 33 45 41 19 49 28 35 49 41 37 39 32 25 29 31 53 33 34 31 28 51 49 46 24 53 31 53 52 32 52 17 42 26 32 47 23 32 34 42 33 33 28 33 18 36 36 36 35 12 13 31 45 29 42 31 33 25 51 28 33 24 30 43 26 37 31 38 28 41 29 23 46 37 51 16 22 48 31 24 31 33 8 30 43 48 37 33 31 30 31 32 33 23 43 48 31 29 29 35 32 31 42 24 31 33 27 33 18 32 31 48 48 46 16 28 25 24 32 27 29 14 38 31 26 32 29 21 31 30 25 32 32 26 35 33 31 24 22 25 32 34 27 36 32 38 18 19 30 24 26 31 25 35 29 33 27 15 25 27 32 32 19 31 27 11 44 44 44 44 21 21 22 30 26 25 38 38 23 24 33 43 15 44 36 18 22 23 25 19 31 32 27 34 34 32 32 32 31 17 24 9 12 22 7 7 4 6 32 19 9 18 17 29 30 24 17 11 43 8 33 9 15 24 34 40 19 14 39 13 10 5 16 6 9 16 29 38 25 11 24 15 28 9 27 20 24 22 24 28 27 29 18 14 22 20 28 13 29 10 25 14 16 7 3 26 21 13 28 8 13 22 10 10 9 30 7 5 6 8 15 12 4 3 7 8 29 6 12 20 4 3 5 7 6 13 2 3 1 3 4 7 1 2 10 28 14 24 16 4 5 9 17 4 5 5 4 7 15 5 3 4 17 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr14_78750599_78751496
seq2: B6Ng01-233H12.b_44_948

seq1  GAATTCCAGAGGTAATCCAGTTAGGTCAACACCGGCTTGAAAATGTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGTAATCCAGTTAGGTCAACACCGGCTTGAAAATGTCTGT  50

seq1  ATCGCCAATGGTTTCTCTTGGGGCTTTGAGATTGCACCATCTGTGGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGCCAATGGTTTCTCTTGGGGCTTTGAGATTGCACCATCTGTGGGCTC  100

seq1  AGAGTTGAAGGAGGGGTGTTGCCTTGGCACATGAGTGGACAGACTTAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGAAGGAGGGGTGTTGCCTTGGCACATGAGTGGACAGACTTAGTA  150

seq1  GCTGAGAGAGGAATGACAAGATGACGAGCTCATCCTGGAGGTGACCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGAGGAATGACAAGATGACGAGCTCATCCTGGAGGTGACCTGGC  200

seq1  CCTGGCTGTGGCAGCAAGATCCCAGGAGAAGAGGAAAACTTGGTGCTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTGTGGCAGCAAGATCCCAGGAGAAGAGGAAAACTTGGTGCTTGT  250

seq1  GGAGATGACAGTGGTGGTGAAGATGAAGATGATGGTGATTTTGATGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATGACAGTGGTGGTGAAGATGAAGATGATGGTGATTTTGATGAAGT  300

seq1  AGAAGAAAAATCACCAGCGAGTACATCTCTATGAGACCTCCCTGCGGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAATCACCAGCGAGTACATCTCTATGAGACCTCCCTGCGGAAA  350

seq1  GGACATAAAATCAAGTCAGAGCAGAGAGGGCTGAAAACTATCAGCATCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATAAAATCAAGTCAGAGCAGAGAGGGCTGAAAACTATCAGCATCGA  400

seq1  AGGTCAAGGACCCTTCAAAAACAAGCAGGGGAGGGTCTTCCTAAAATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGGACCCTTCAAAAACAAGCAGGGGAGGGTCTTCCTAAAATACC  450

seq1  CAAAGGACCTGGTTCTACAGAACACATCAAAAAGGAGAAATCAGAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGACCTGGTTCTACAGAACACATCAAAAAGGAGAAATCAGAAGAGT  500

seq1  CCAAATAAGGATAGACCGTACTGATATCCAAAATAAAGTTTCTATTTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAAGGATAGACCGTACTGATATCCAAAATAAAGTTTCTATTTCAT  550

seq1  TCTCTTTAAAAATCCTTTTCATTTGCTTGATTTTATTTTTATTTTTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAAAAATCCTTTTCATTTGCTTGATTTTATTTTTATTTTTACAT  600

seq1  TAGTAGATGCATTATACTATGCAATCATTGTTACTGAAAAGACATTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGATGCATTATACTATGCAATCATTGTTACTGAAAAGACATTTGTT  650

seq1  AAATGTAATGCCATTTTTAACAGTTCTATAAATGTGTATAAAATAATATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATGCCATTTTTAACAGTTCTATAAATGTGTATAAAATAATATA  700

seq1  TTATCATTTTCATCACC-TTACCCTTCACCCCATATTTT-CCCAACCAAC  748
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  TTATCATTTTCATCACCTTTACCCTTCACCCCATATTTTCCCCAACCAAC  750

seq1  CTCCCATCGACTTCCACATTTTTTTTTAAATTTTGATCCAATGAGTTTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATCGACTTCCACATTTTTTTTTAAATTTTGATCCAATGAGTTTCT  800

seq1  TCGGTGTCGCAGGTATAAT-GAGCAGCTGT-GGGAGTTGTTTTCTAG-AA  845
      ||||||||||||||||||| |||||||||| |||||||||||||||| ||
seq2  TCGGTGTCGCAGGTATAATGGAGCAGCTGTGGGGAGTTGTTTTCTAGAAA  850

seq1  CATGAACTATTTGCCAGTGG-CTACACCGCTAAAG-AAAGTGAGGCCTAC  893
      |||||||||||||| ||||| |||||||||||||| ||||||||||||||
seq2  CATGAACTATTTGCTAGTGGTCTACACCGCTAAAGAAAAGTGAGGCCTAC  900

seq1  TCCCT  898
      |||||
seq2  TCCCT  905

seq1: chr14_78947351_78948416
seq2: B6Ng01-233H12.g_69_1135 (reverse)

seq1  TTCTGGTATGCCTCTCCAAATGTCTTAGAATAGGCTGATCTGAGAATATT  50
      |||| ||||| ||||||||||||||  || || ||||||||||||||| |
seq2  TTCTTGTATGGCTCTCCAAATGTCTCTGATTA-GCTGATCTGAGAATAGT  49

seq1  A-GCCAAACCCTAAAGAAGTATTGTCAGTACCTCTCTTTCTTCCA-CCAA  98
      | ||||||||||||  ||||||||||||||||||||||||||||| ||||
seq2  AGGCCAAACCCTAAGAAAGTATTGTCAGTACCTCTCTTTCTTCCACCCAA  99

seq1  AATAA-CCAATCATCTTCCTTCTCTCCATCTAACTCACTTATTTAAATGT  147
      ||||| ||||||||||||| ||||||||||||||||||||| ||||||||
seq2  AATAACCCAATCATCTTCC-TCTCTCCATCTAACTCACTTA-TTAAATGT  147

seq1  CATCCA-TTTTTATCTCAGAACACACAAGGTCCATGTAGTTCATGTCATA  196
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTTTTATCTCAGAACACACAAGGTCCATGTAGTTCATGTCATA  197

seq1  TCAGAATCGTGAACCCCGCTAGAATCAGACAAACTTCAGCAAATACAATC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATCGTGAACCCCGCTAGAATCAGACAAACTTCAGCAAATACAATC  247

seq1  CAAACACGGATGCTAAGAGGCAGACACTTCATCTCTGCAAGCCATCTAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACGGATGCTAAGAGGCAGACACTTCATCTCTGCAAGCCATCTAAA  297

seq1  ATCTTTTGAGCACTGATGGGAAAGACTGGGTGTGGTGGTTCGGATAGAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTGAGCACTGATGGGAAAGACTGGGTGTGGTGGTTCGGATAGAAA  347

seq1  GATGTCCTGCTCAGGCTCAGGCATTTGGACACTGCCCCAACTGGTGGCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCTGCTCAGGCTCAGGCATTTGGACACTGCCCCAACTGGTGGCAC  397

seq1  TGTGGGGCGATTTAGCTGGCCATTCTAGAGGAAGTATGTCACTGGAGCTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGCGATTTAGCTGGCCATTCTAGAGGAAGTATGTCACTGGAGCTA  447

seq1  GGCTTTGAGAGTACATAGCCCTATTTCTCTTTCAGTTCAGTCTTTCTGCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGAGAGTACATAGCCCTATTTCTCTTTCAGTTCAGTCTTTCTGCT  497

seq1  TTATGCATGCTGATAAATATGTGGTCTCTCAGCTTCCTGCCATGCCTCCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCATGCTGATAAATATGTGGTCTCTCAGCTTCCTGCCATGCCTCCT  547

seq1  ACGACTGGTGGATTCATCTTTCTGGAAGAATAAGCCCAAATAACTCCTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACTGGTGGATTCATCTTTCTGGAAGAATAAGCCCAAATAACTCCTCC  597

seq1  TTCTATAAGTTGCCTTGGTCGTGCTGTTCTATCACAGCAACCGAAAGCAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAGTTGCCTTGGTCGTGCTGTTCTATCACAGCAACCGAAAGCAA  647

seq1  GATCATACAACCAGGGACCGGGAATGCTGGAATTCCTGCAGCCTCTCGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATACAACCAGGGACCGGGAATGCTGGAATTCCTGCAGCCTCTCGTT  697

seq1  CCTACAGAGTTCTTTAACCTTCACCTTCTATCCCAAGGATTTGACTCTCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGAGTTCTTTAACCTTCACCTTCTATCCCAAGGATTTGACTCTCC  747

seq1  TCAAGAATTTCTAAGAAACCATTTGTCAGGAACTCCATGAGAGATAAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAATTTCTAAGAAACCATTTGTCAGGAACTCCATGAGAGATAAATT  797

seq1  CCCCTAACAGGCTAACCTATTAGCCAGTTAACTCCATAGAGTAGTTTCCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAACAGGCTAACCTATTAGCCAGTTAACTCCATAGAGTAGTTTCCA  847

seq1  CAAAACCAGTTTGATCACAATGCCACTTAAACGCAGTGAGAAACCAGGCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAGTTTGATCACAATGCCACTTAAACGCAGTGAGAAACCAGGCC  897

seq1  TTATTATTAGTGACTCCCAAGGAACTGTCACAGAATTGGGAAATAGGCAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATTAGTGACTCCCAAGGAACTGTCACAGAATTGGGAAATAGGCAT  947

seq1  TAGCTGGAGTCCAAGCATATTTCTGCTGATCCACAGTATCTTCTGATTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGGAGTCCAAGCATATTTCTGCTGATCCACAGTATCTTCTGATTCA  997

seq1  CTATTTTCATATGCTTTCTGGGGCCTTGGCCTGAGAAATTGCAACCAAGC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCATATGCTTTCTGGGGCCTTGGCCTGAGAAATTGCAACCAAGC  1047

seq1  CAAGAGCAGACAAGGAATTC  1066
      ||||||||||||||||||||
seq2  CAAGAGCAGACAAGGAATTC  1067

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information