BAC Information

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BAC

Clone NameB6Ng01-233N12
Chromosome14 (Build37)
Map Location 27,730,136 - 27,731,171
singlet/doubletsinglet
Overlap genenone
Upstream geneD14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213, LOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14
Downstream geneAppl1, Hesx1, Il17rd, LOC665333, Arhgef3, LOC100040147, Ccdc66, LOC665370, Erc2
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233N12.bB6Ng01-233N12.g
ACCGA045784GA045785
length1,0411,050
definitionB6Ng01-233N12.b B6Ng01-233N12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctggtgttatgacatatctccatgaggcagatgacctaactga
aacttggagaggtttactgcaaatgcactataatgtttcaaagactgtgc
catagatacagtgtgtctttggaattagggattgttactggtgccggttt
ccctcgaatcactctgccaatcagtaagtggaagcagtttctccccatca
cacctattaactctctgaaatcatttttgcttttctttccttctctcttt
ctttctttctttcaagatttatttattttatatgtgtgagtacactgtca
ctgttgctgtcttcagacacaccagaagagggcatcagatcctataagag
acggttatgagccaccatgtggttgctgggaattgaactcaggacctgtg
gaagagcagtcagtgctgagccatctctccagccccgtttttgctttact
ttccagtaaatttgaaatctgctggcctagagatcttaatctcaaaggga
gtctagtgatgactccattggattgaaaggtcaggctgtcacaaggccat
tttgccactgaaaggcatttctttcttggctggagtgactgatccctaat
tcaaaggggaatttagtgtttctcacagcaggggcaaagatcatgatctc
tggaattagggactcttgggtacagcactcaatatttccatgaccgctga
aaatgttaatagaaacttagcaaccaaaaatggcagagccaaggctggat
acacggcttagccattaagagcactgattgttcttccagaggatcaggtt
taaccgccaacatctacaaggtagctcacaactgtctctaactccagttc
caggggatccagtgccctcttctggcaggtttgggaactgcaggtatgtg
gtaccacagccgtacatatagacaaaacacctatagcttaacattatgta
tgtatgtatgtatgtatgtatgtatgtggaccactccacttcagtagtcc
acagggtttccagctcaaggagtgaggatttataaagtaga

gaattcaaggtcatccatggctacacagtaaatccaaggaaactttggct
gtttgagacggtctcaaaaaaaaaatatatatatatatacatatatatat
acgttactttgaacagagcttctcaacatgcctgaaacaataaggcaatt
aaaattcaaaacctcatccaagtacagtggtacatgcctagaatccaaac
tattcaggaggtgaggtgggaggacctcaaaccaaggccatcctaggcta
cagggcaagaccttgagtgcgaatacaaatttcaagttaactgaaataca
cacagtcctaatagtgtgctcatcttatagaaagtgtaaatgcaatttct
ttgtgcttaaaacaacaaatgtcacttctggccactgtcttttaagtagc
tctgctggcctggaactcagctcggcctgcatctgactcctgaatgccag
aattaagtgagcacaaccatcccaggccatgcttcttggaatcttacaga
aaatatgtcttactgattcaaatgaatagaataatagctccatcatatga
cctagaagttagcagtccatgtaccacaatcccagtgccaacttagcttc
tgacaccatttcttcatagtcaagtacacaggccgggcaatttagaagtc
taaattgaaattttatcactgatggggaaaacactagccatctttctgga
aattcctggttatggttcaccacttaactgattaatgtgaacactggcag
aagaatttaaagtgtttccaaatcaatgaacttttttttttttttttttg
cactcaacacaggctggtactgaacagggaggtgcttactaccaacataa
gacaccagattttagtttttatttttatacttttattacatgtataaagt
atttaaattgctatttctttttactagtgcattattagtaaaagaataag
tttttactcatatattaaggctttgtatgcaagtcgaaggaagaatatag
atgttgattagggccatacctatgtcctcacactgaagctctccatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_27730136_27731171
seq2: B6Ng01-233N12.g_70_1119

seq1  GAATTCAAGGTCATCCATGGCTACACAGTAAATCCAAGGAAACTTTGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCATCCATGGCTACACAGTAAATCCAAGGAAACTTTGGCT  50

seq1  GTTTGAGACGGTCTCAAAAAAAAAATATATATATATATACATATATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGACGGTCTCAAAAAAAAAATATATATATATATACATATATATAT  100

seq1  ACGTTACTTTGAACAGAGCTTCTCAACATGCCTGAAACAATAAGGCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTACTTTGAACAGAGCTTCTCAACATGCCTGAAACAATAAGGCAATT  150

seq1  AAAATTCAAAACCTCATCCAAGTACAGTGGTACATGCCTAGAATCCAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCAAAACCTCATCCAAGTACAGTGGTACATGCCTAGAATCCAAAC  200

seq1  TATTCAGGAGGTGAGGTGGGAGGACCTCAAACCAAGGCCATCCTAGGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGGAGGTGAGGTGGGAGGACCTCAAACCAAGGCCATCCTAGGCTA  250

seq1  CAGGGCAAGACCTTGAGTGCGAATACAAATTTCAAGTTAACTGAAATACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAAGACCTTGAGTGCGAATACAAATTTCAAGTTAACTGAAATACA  300

seq1  CACAGTCCTAATAGTGTGCTCATCTTATAGAAAGTGTAAATGCAATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCCTAATAGTGTGCTCATCTTATAGAAAGTGTAAATGCAATTTCT  350

seq1  TTGTGCTTAAAACAACAAATGTCACTTCTGGCCACTGTCTTTTAAGTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTTAAAACAACAAATGTCACTTCTGGCCACTGTCTTTTAAGTAGC  400

seq1  TCTGCTGGCCTGGAACTCAGCTCGGCCTGCATCTGACTCCTGAATGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGGCCTGGAACTCAGCTCGGCCTGCATCTGACTCCTGAATGCCAG  450

seq1  AATTAAGTGAGCACAACCATCCCAGGCCATGCTTCTTGGAATCTTACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTGAGCACAACCATCCCAGGCCATGCTTCTTGGAATCTTACAGA  500

seq1  AAATATGTCTTACTGATTCAAATGAATAGAATAATAGCTCCATCATATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTCTTACTGATTCAAATGAATAGAATAATAGCTCCATCATATGA  550

seq1  CCTAGAAGTTAGCAGTCCATGTACCACAATCCCAGTGCCAACTTAGCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGTTAGCAGTCCATGTACCACAATCCCAGTGCCAACTTAGCTTC  600

seq1  TGACACCATTTCTTCATAGTCAAGTACACAGGCCGGGCAATTTAGAAGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCATTTCTTCATAGTCAAGTACACAGGCCGGGCAATTTAGAAGTC  650

seq1  TAAATTGAAATTTTATCACTGATGGGGAAAACACTAGCCATCTTTCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAAATTTTATCACTGATGGGGAAAACACTAGCCATCTTTCTGGA  700

seq1  AATTCCTGGTTATGGTTCACCACTTAACTGATTAATGTGAACACTGGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTGGTTATGGTTCACCACTTAACTGATTAATGTGAACACTGGCAG  750

seq1  AAGAATTTAAAGTGTTTCCAAATCAATGAAC--TTTTTTTTTTTTTTTTG  798
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  AAGAATTTAAAGTGTTTCCAAATCAATGAACTTTTTTTTTTTTTTTTTTG  800

seq1  CACTCAACACAGGCTGGTACTGAACAGGGAGGTGCTTACTACCAACATAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACACAGGCTGGTACTGAACAGGGAGGTGCTTACTACCAACATAA  850

seq1  GACACCAGATTTTAGTTTTTATTTTTATAC-TTTATTACATGTATAAAGT  897
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GACACCAGATTTTAGTTTTTATTTTTATACTTTTATTACATGTATAAAGT  900

seq1  ATTTAAATTGCTATT--CTTTTACTAGTGCA-TATTAGTAAAAG-ATAAG  943
      |||||||||||||||   ||||||||||||| |||||||||||| |||||
seq2  ATTTAAATTGCTATTTCTTTTTACTAGTGCATTATTAGTAAAAGAATAAG  950

seq1  TTTTTACTCATATAT--AGGC-TTGTATGCAAAGTCG-AGGAAGAATATA  989
      |||||||||||||||  |||| |||||||| |||||| ||||||||||||
seq2  TTTTTACTCATATATTAAGGCTTTGTATGC-AAGTCGAAGGAAGAATATA  999

seq1  GATGTTGATTA-GGCCATA-CTATGT-CTCACACTGAAGCTCT-CATATC  1035
      ||||||||||| ||||||| |||||| |||||||||||||||| ||||||
seq2  GATGTTGATTAGGGCCATACCTATGTCCTCACACTGAAGCTCTCCATATC  1049

seq1  A  1036
      |
seq2  A  1050


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