BAC Information

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BAC

Clone NameB6Ng01-236D23
Chromosome14 (Build37)
Map Location 44,102,029 - 44,103,176
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666285, LOC666298, LOC100042031, EG666318, EG546249, LOC100040863, LOC100040875, LOC100040890, LOC100042055, LOC635209, 1700091H14Rik, EG666415, LOC100040976, LOC100040983, LOC100042114, LOC666370, EG666376, LOC100041025, EG666396, LOC100041046, LOC100042130, LOC624893, LOC100041069, EG666420, LOC666436, EG638353, LOC666454, LOC100041106, EG638262, EG640992, EG666471, LOC666481, LOC100041143, EG666485, 1700049E17Rik, LOC666492, 1700001F09Rik, LOC673380, LOC100042326, EG666502
Downstream geneLOC545039, LOC100041227, LOC100041235, LOC100042342, LOC666322, EG666556, EG666561, LOC676304, Rbmxrtp, LOC673132, LOC100041300, LOC624717, LOC672977, EG666590, LOC100041327, EG623592, Ear1, Ear-ps12, Ear-ps9, Ear-ps8, Ang-ps3, Ear10, EG666451, LOC672161, Ang3, Ear-ps7, Ear-ps10, EG630952, EG666621, LOC100041356, LOC100041364, LOC100041371, LOC100041376, Ear-ps2, Ang-ps1, Ear2, LOC100041393, LOC100041422, EG666638, 4930503E14Rik, EG666647, EG624862, EG666660, EG666667, EG546250, EG666675, LOC100041494, LOC100041497, EG666678, LOC676402
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236D23.bB6Ng01-236D23.g
ACCGA047512GA047513
length1,1371,171
definitionB6Ng01-236D23.b B6Ng01-236D23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtaatacagtggttcacagtaaatgaggtgaacagatgattc
caaaaaggagtgaaatggtgaataaataatgaaccacattaaatattttc
aggcataaaaggaatgaacatttaaagaaaaccacaccaacatgcaatct
cattccagacagcatgtgcacaattaagggaacaaacaacaaatggttta
gaggatgtgaggaaaggagcattattcactaagactggaaactagcaaag
ccgctggagaaaaccttggtttagaggatgctcaaagtcctgaaatagaa
ctgcaatgtatgctgcaatcctacatttaaacatttacctggaagattga
tgtcagtagaggtgcctgcatacaaggatgtgccctgcagcactgtacac
gaaaccacattgtagaaaatgcctggaaacacattactagaccaaaacat
tgggaaatgggaaatgttattcagaatgcacttatgtcatctgctgaaga
atggagggaatggaagacagtcaaagagatgaaatgaaccaaaatcaaaa
ggacaaataccgcacattttctctcatcatgctgaatctaaacttaaatt
aagatgatatcaaaggtttactgggaatattctgagaaatggtcagtata
aaggatgcggtgtgataggagatgatgaacagagagaattctatgaaatg
cattgtttgcatttgtgacaatgttgcaaggtgcacataatagatgctat
aacagcctatgtaataatacatggcagtacataatattatacaaaagctt
gaggcctgagttcagagtcctatcacccctatctaaagcttctcatggag
tcatgcacctgtaataacagcagtggggcgacacctaggcaaatccctga
gtacactgggtagtgtagccaattgctgagtccctgatcagtgagagatc
tgttcttcaaaattacaatgttactgtgtttgacgcagattcccagtagt
gacctctgacctcaacttgtatgcacaccccacaccccttaaagaacatt
gtcatgagcatactgactatgtatgatgtcattccctgtaactagtatgc
tcatcatgtctgcgccttccactctgttcaacaactt
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactctagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaagggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgcgc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactct
gttcatagcagccttgtttataatagccagaagccggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatatggtacatttacacaatg
gaatactactcggctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggcatcatcctgagtgaggtaaagcaatcacaaagg
aactcacagaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgctaaacgcatgaaattcaaga
agaaggaagaccaaagtgcagacactttaccccttcctagaaatgggaac
aaaacacccatggaaggagtaacagagacaaaatttggagctgtgacaaa
aagatggaccatctagtgattgccatatgtagggatccatcccataatca
gcttccaaacgctgacaccattgcacacactagcaaaattttgctgaaag
gacccagatatagctgtctcttgtgagactattccggggcctagcaaaca
cagaagtggatgatcacagtcaggtattggatggatcacatggcccccaa
tgcagagctagagatatacccaaggagctacggaactgcaaccctatagt
ggacacatatgactaccagtacccgagctctgtctctagctgcatatgca
tcaaaagatgctatcgtcatccactgcaaagagaagcccattgacttggc
tacttaatgctcagtacaggatcgtcaagttcaaagcgaatgttgctgtt
ggtatgagtcatactctcgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_44102029_44103176
seq2: B6Ng01-236D23.b_47_1183

seq1  GAATTCTAGTAATACAGTGGTTCACAGTAAATGAGGTGAACAGATGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTAATACAGTGGTTCACAGTAAATGAGGTGAACAGATGATTC  50

seq1  CAAAAAGGAGTGAAATGGTGAATAAATAATGAACCACATTAAATATTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGGAGTGAAATGGTGAATAAATAATGAACCACATTAAATATTTTC  100

seq1  AGGCATAAAAGGAATGAACATTTAAAGAAAACCACACCAACATGCAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATAAAAGGAATGAACATTTAAAGAAAACCACACCAACATGCAATCT  150

seq1  CATTCCAGACAGCATGTGCACAATTAAGGGAACAAACAACAAATGGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAGACAGCATGTGCACAATTAAGGGAACAAACAACAAATGGTTTA  200

seq1  GAGGATGTGAGGAAAGGAGCATTATTCACTAAGACTGGAAACTAGCAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGTGAGGAAAGGAGCATTATTCACTAAGACTGGAAACTAGCAAAG  250

seq1  CCGCTGGAGAAAACCTTGGTTTAGAGGATGCTCAAAGTCCTGAAATAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGGAGAAAACCTTGGTTTAGAGGATGCTCAAAGTCCTGAAATAGAA  300

seq1  CTGCAATGTATGCTGCAATCCTACATTTAAACATTTACCTGGAAGATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATGTATGCTGCAATCCTACATTTAAACATTTACCTGGAAGATTGA  350

seq1  TGTCAGTAGAGGTGCCTGCATACAAGGATGTGCCCTGCAGCACTGTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTAGAGGTGCCTGCATACAAGGATGTGCCCTGCAGCACTGTACAC  400

seq1  GAAACCACATTGTAGAAAATGCCTGGAAACACATTACTAGACCAAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACATTGTAGAAAATGCCTGGAAACACATTACTAGACCAAAACAT  450

seq1  TGGGAAATGGGAAATGTTATTCAGAATGCACTTATGTCATCTGCTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAATGGGAAATGTTATTCAGAATGCACTTATGTCATCTGCTGAAGA  500

seq1  ATGGAGGGAATGGAAGACAGTCAAAGAGATGAAATGAACCAAAATCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGGAATGGAAGACAGTCAAAGAGATGAAATGAACCAAAATCAAAA  550

seq1  GGACAAATACCGCACATTTTCTCTCATCATGCTGAATCTAAACTTAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAATACCGCACATTTTCTCTCATCATGCTGAATCTAAACTTAAATT  600

seq1  AAGATGATATCAAAGGTTTACTGGGAATATTCTGAGAAATGGTCAGTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGATATCAAAGGTTTACTGGGAATATTCTGAGAAATGGTCAGTATA  650

seq1  AAGGATGCGGTGTGATAGGAGATGATGAACAGAGAGAATTCTATGAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGCGGTGTGATAGGAGATGATGAACAGAGAGAATTCTATGAAATG  700

seq1  CATTGTTTGCATTTGTGACAATGTTGCAAGGTGCACATAATAGATGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTTGCATTTGTGACAATGTTGCAAGGTGCACATAATAGATGCTAT  750

seq1  AACAGCCTATGTAATAATACATGGCAGTACATAATATTATACAAAAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCTATGTAATAATACATGGCAGTACATAATATTATACAAAAGCTT  800

seq1  GAGGCCTGAGTTCAGAGTCCTATCACCCCTATCTAAAGCTTCTCATGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTGAGTTCAGAGTCCTATCACCCCTATCTAAAGCTTCTCATGGAG  850

seq1  TCATGCACCTGTAATAACAGCAGTGGGGCGACACCTAGGCAAATCCCTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCACCTGTAATAACAGCAGTGGGGCGACACCTAGGCAAATCCCTGA  900

seq1  GTACACTGGGTAGTGTAGCCAATTGCTGAGGTCCCTGATCAGTGAGAGAT  950
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTACACTGGGTAGTGTAGCCAATTGCTGA-GTCCCTGATCAGTGAGAGAT  949

seq1  CTGTTCTTCAAAATTACAATGTTACTGTGTTTGACGCAGATTCCCAGTAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTCAAAATTACAATGTTACTGTGTTTGACGCAGATTCCCAGTAG  999

seq1  TGACCTCTGACCTCAACTTGTATGCACAACCCCACACCCCTTAAAAGAAC  1050
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  TGACCTCTGACCTCAACTTGTATGCAC-ACCCCACACCCCTT-AAAGAAC  1047

seq1  ATTGTCATGAAGCATTACTGACTAATGTATTGATGTCATCCCTTGTAAAC  1100
      ||||||||| |||| |||||||| ||||| ||||||||| || |||||  
seq2  ATTGTCATG-AGCA-TACTGACT-ATGTA-TGATGTCATTCCCTGTAA--  1091

seq1  TTAGTATGCTTCATCATGTCTGCGGCTTCCACTCTGTTCAAACAACTT  1148
       |||||||| |||||||||||||| |||||||||||||| ||||||||
seq2  CTAGTATGC-TCATCATGTCTGCGCCTTCCACTCTGTTC-AACAACTT  1137