BAC Information

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BAC

Clone NameB6Ng01-238F15
Chromosome14 (Build37)
Map Location 23,505,215 - 23,506,360
singlet/doubletsinglet
Overlap gene1700112E06Rik
Upstream geneEG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075, EG435392
Downstream geneLOC665068, Kcnma1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238F15.bB6Ng01-238F15.g
ACCGA049069GA049070
length9601,161
definitionB6Ng01-238F15.b B6Ng01-238F15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatacggaatggctgagaagcaactaaaaaatgt
tcaacatccttaatcatcagggaaatgcaaatccaaacaaccctgagatt
ccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagca
gatgctggcgaggatgtggagaaataggaacactcctccattgctggtag
gattgcaagcttgtacaaccactctggaaatcagtttggtggttcctcag
aaaactggacataatactaccgtaagatccagcaatacctctcctgggca
tatacccagaagatgctccaacatgtaacaaggacacatgctccactatg
ttcatagcacccttatttataatagccagaggctgaaaagaaccaagatg
tccctcaacagaagaatggattcagaaaatgtggtacatttatacaatgg
agtactactcagctattaaaaacaatgaatttatgaaattcttaggcaaa
tggatgagactagaaagtatcatcctgagtgaggtaacctaatcacaaaa
gaacacacatggtatgcactcactaataagtggatattagcccagaagct
cgaaatatccaagatactattcgcaaaacacatgaaattcatgaagaaag
aagacctaagtgtggatacttttatccttcttagaaggggggggggggac
aaaatacccatggaaggtgttacaaagacaaagttgtgggagcagatact
gaatgaatgaccatatagagactgccccatctagagatccatcccatata
caacgaccaaacccagacactattgtgggatgcccaacaagatcttgctg
aaagaagcctgatatagctgtctcctgagaggttcctgccagtgccctga
acaattataaagtggatgcttgtcaccctaccctttggaatgaagcacag
ggttctccaa

gaattcttttgagagttcttccccctaatactttttgaatagtaaccttt
tttaaaaagtgaaaattgggactgggacaatggctcacttggtaaagtat
ctgctaaacaagtgaagaggcctaagtttgaatgccactgtacatagagg
agctgaaggttgcagcagtcctctgtcatactagtcctgggtttgcagga
gatgggcaggtacctttctcaagaaggaaatagaacagtgacaggaagaa
aactgctgttgacatctggctttcacatacatctacatctatgtgctcat
gtgcccatatacaaccatatgaaccaatacgtaacacacacacacacaca
cacacacacacacacagtagaatagtagaatcaaagttctttgcccagag
ccctatataaagtatcagactgagactgttattagtaatattccctccat
tctttagagtaagccagggttctagagagaatgtcacatggagtcctttt
tatataataagtagtcttcagtagggtcatgagccctagtggagctgtgt
ctaggatttcctctctccacacacatgccagaaactgagggccatgtgat
tgaaagtgtgaggccccaaacatccaataaacagtcctagaaggtgagag
gcaactcattccaactttgtgatgtccccagaaactgtgctgataagaga
aaaacactaaagaataaacgagagattggggagataatggggaaagcaga
ggaggacaagacagcgctttcaactctcgggcttgagaaatgcatcatgc
caaggaagataaattggagaaacattgagaagggaaagagatcttgtctc
tgactcgtgtatttctctttaagtgaatgaggcaataacaccagaaataa
gagagtgtaaaattggagctgtaggggcgcagcccaaaatcacacttcct
gataatcctccagtctttgcaggatgctagcattgttgtaccaagcagtt
ttctggaatttggaattatggcatgtaatccacctggatcagaggtgtgg
ccggtaggctagaagcctatttgctagttagaaaaggagactgtctagtc
ctgtgctgacgccggatttcatccctcgcacattcagggagcctctctgt
agctggcatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23505215_23506360
seq2: B6Ng01-238F15.g_68_1228

seq1  GAATTCTTTTGAGAGTTCTTCCCCCTAATACTTTTTGAATAGTAACCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGAGAGTTCTTCCCCCTAATACTTTTTGAATAGTAACCTTT  50

seq1  TTTAAAAAGTGAAAATTGGGACTGGGACAATGGCTCACTTGGTAAAGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTGAAAATTGGGACTGGGACAATGGCTCACTTGGTAAAGTAT  100

seq1  CTGCTAAACAAGTGAAGAGGCCTAAGTTTGAATGCCACTGTACATAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAAACAAGTGAAGAGGCCTAAGTTTGAATGCCACTGTACATAGAGG  150

seq1  AGCTGAAGGTTGCAGCAGTCCTCTGTCATACTAGTCCTGGGTTTGCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAGGTTGCAGCAGTCCTCTGTCATACTAGTCCTGGGTTTGCAGGA  200

seq1  GATGGGCAGGTACCTTTCTCAAGAAGGAAATAGAACAGTGACAGGAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCAGGTACCTTTCTCAAGAAGGAAATAGAACAGTGACAGGAAGAA  250

seq1  AACTGCTGTTGACATCTGGCTTTCACATACATCTACATCTATGTGCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTGTTGACATCTGGCTTTCACATACATCTACATCTATGTGCTCAT  300

seq1  GTGCCCATATACAACCATATGAACCAATACGTAACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCATATACAACCATATGAACCAATACGTAACACACACACACACACA  350

seq1  CACACACACACACACAGTAGAATAGTAGAATCAAAGTTCTTTGCCCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACAGTAGAATAGTAGAATCAAAGTTCTTTGCCCAGAG  400

seq1  CCCTATATAAAGTATCAGACTGAGACTGTTATTAGTAATATTCCCTCCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATATAAAGTATCAGACTGAGACTGTTATTAGTAATATTCCCTCCAT  450

seq1  TCTTTAGAGTAAGCCAGGGTTCTAGAGAGAATGTCACATGGAGTCCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGAGTAAGCCAGGGTTCTAGAGAGAATGTCACATGGAGTCCTTTT  500

seq1  TATATAATAAGTAGTCTTCAGTAGGGTCATGAGCCCTAGTGGAGCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATAAGTAGTCTTCAGTAGGGTCATGAGCCCTAGTGGAGCTGTGT  550

seq1  CTAGGATTTCCTCTCTCCACACACATGCCAGAAACTGAGGGCCATGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATTTCCTCTCTCCACACACATGCCAGAAACTGAGGGCCATGTGAT  600

seq1  TGAAAGTGTGAGGCCCCAAACATCCAATAAACAGTCCTAGAAGGTGAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTGTGAGGCCCCAAACATCCAATAAACAGTCCTAGAAGGTGAGAG  650

seq1  GCAACTCATTCCAACTTTGTGATGTCCCCAGAAACTGTGCTGATAAGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTCATTCCAACTTTGTGATGTCCCCAGAAACTGTGCTGATAAGAGA  700

seq1  AAAACACTAAAGAATAAACGAGAGATTGGGGAGATAATGGGGAAAGCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTAAAGAATAAACGAGAGATTGGGGAGATAATGGGGAAAGCAGA  750

seq1  GGAGGACAAGACAGCGCTTTCAACTCTCGGGCTTGAGAAATGCATCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACAAGACAGCGCTTTCAACTCTCGGGCTTGAGAAATGCATCATGC  800

seq1  CAAGGAAGATAAATTGGAGAAACA-TGAGAAGGGAAAGAGATCTTGTCTC  849
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAAGGAAGATAAATTGGAGAAACATTGAGAAGGGAAAGAGATCTTGTCTC  850

seq1  TGACTCGTGTATTTCTCTTTAAGTGAATGA-GCAATAACA-CAGAAATAA  897
      |||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  TGACTCGTGTATTTCTCTTTAAGTGAATGAGGCAATAACACCAGAAATAA  900

seq1  GAGAGTGTAAAA-TGGAGCTG--AGGGCGCAG-CCAAAATCACACTTCCT  943
      |||||||||||| ||||||||   |||||||| |||||||||||||||||
seq2  GAGAGTGTAAAATTGGAGCTGTAGGGGCGCAGCCCAAAATCACACTTCCT  950

seq1  GATAAT-CTCCAGCTTTGGCAGGATGCTAGCA-TGTTGTACCAAAGCAGT  991
      |||||| ||||||  || |||||||||||||| ||||||||| |||||||
seq2  GATAATCCTCCAGTCTTTGCAGGATGCTAGCATTGTTGTACC-AAGCAGT  999

seq1  TTTCTGG-ATTTTGAATTAT-GCATGTAATTCACCCTGATCAGA-GTGTG  1038
      ||||||| |||| ||||||| ||||||||| ||||  ||||||| |||||
seq2  TTTCTGGAATTTGGAATTATGGCATGTAATCCACCTGGATCAGAGGTGTG  1049

seq1  GCCGGGAAGCCAAGAGCC-ATTTGCTAGTCAG-AAAGGAGACTG-CCAGT  1085
      ||||| | || |  |||| |||||||||| || ||||||||||| | |||
seq2  GCCGGTAGGCTAGAAGCCTATTTGCTAGTTAGAAAAGGAGACTGTCTAGT  1099

seq1  CCTGTGCTGACGCCAGATTTCAT-CCTC-AACA-TCAGGGAGGCTCTCCT  1132
      |||||||||||||| |||||||| ||||  ||| |||||||| |||| ||
seq2  CCTGTGCTGACGCCGGATTTCATCCCTCGCACATTCAGGGAGCCTCT-CT  1148

seq1  GTAGCTTTGCATAG  1146
      ||||| | ||||||
seq2  GTAGC-TGGCATAG  1161


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