BAC Information

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BAC

Clone NameB6Ng01-238K15
Chromosome14 (Build37)
Map Location 114,443,612 - 114,444,744
singlet/doubletsinglet
Overlap genenone
Upstream geneTpm3-rs7, LOC100043510, LOC382947
Downstream geneLOC668791, LOC100043821, LOC100043521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238K15.bB6Ng01-238K15.g
ACCGA049299GA049300
length1,135998
definitionB6Ng01-238K15.b B6Ng01-238K15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaacagtgtgtaaatagtgctaaatggtccatgggatttca
tttacttttagaaaatgtgtttgttcaggaaacagagggataagcatatc
agtagctttcttctgcctgcatctaaggctgcagctctgggttgcttata
aaagttagatttcttgtaaaagttacttaactaacccgaggaacgattgc
atcttacttttatttacaataaatttgattagtaatgcccagaaaagttc
tcttgtgcaagctcactaattgaatctatgtcagtcatactagaggcagt
ctcctgactactaactcagcatgtctttcacacaaaatgcttcttcgcct
gcggttctcctgtgtattgcttttcttttcataagtgattcaaataatcc
ctaatgattgactgtgtgtattctttgggatttccagattgcctttctac
ctttgaagcttattacttcagagaagcaatatacttgattgattttttgt
tcctccttaaatttactgaatgattcatggcatcgatcatactatttttg
ttttcaagcaagtggtaaaatgataagatccaaatttataacttgacttc
atctttctaatatatgtacatatgtatatgtttctaatctctaatatagt
tatataataaaaaatctaatatgaatctatatatctagtacgtaggagtg
tttatgtgactgtgagtgtgggtgtgttctttattgctctctatcttatt
tttgaaatgtaatctctcataaaacataaaaatgcaattatctgtcaaga
gtagctggtctgcaaaactccagcaaccctactgtctctcctcccacatt
gctaatattacaagcatttgcaattttatataggtttaaagaagcccaaa
tcacatccttatgtttatatggcaaacactttactgactggacatctcta
ttgttatcactaacaatattgaatatttctcttaggactttagaaagaga
agattggtaaactcttccctagaacatattaaggaaaggaaaggagttac
tgctaactacaatatgtattttccctctctaaaggaggcatatctgttct
ggaacacagtaaataaatggaagtgatttgtgctt
gaattctttagcaatgttaaaaaacaatgtttgcttgctgtctcttaata
acactctccatgcagaggctgggcattaggggacaggaggagttcaagat
cagatatggggagggacaggagagttggccagatagccacaagaatgaat
agaaatctgcatctggtggggatgggaagatgggagcatctccaggatgt
gagggagatgcctaagaatcattaaggatgaccttaactgtgactcacat
gactggggatatggaaaatgaaacggcaacctgctatagccaggcaggaa
ccccagtggagtgatacaaacacctattcctccacaaaactttagaccca
aaatgtatcctatctacaagaaaggcagggacagagaatggagtgaagac
aaagagaatggccaagcaataaccagcctaatttgagaccaatcctatag
gcaagcaccaacgcctatattaattatactctgttatgcttgcatacatg
attctagtataactgttttctgagaggctccatccagcacccgactcaga
catatgcagagacccacagcccaacagtggatagagcatggggactcata
tgaaagatttgaagaaaaggttgaggaacctaaagggaacagaaacttca
taggaaggccaactgaatcaactaacctggaccctttgggctctcagaga
ctgattcaccaaccaaagagcataaatgggctggacattgccctgccccc
agtaggtatgtaccaaatgtacagctgagtctccatgagggtacctaaca
acttgaggggagctgtcctaaaaactgttgcctgtctgtgggatatgtgc
ttctagctgggctgtcttgtcttgctttagtgggaagaagatatatctag
cccttcacatacttatgtaccaaggtagggggggttaccccaggagaact
ccaccctctcagaggagcagaggagagggatggaagggagaagttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_114443612_114444744
seq2: B6Ng01-238K15.b_47_1181 (reverse)

seq1  AAGCACAAATCACTTCCATCTATCTACTGTGTTCCCAAGAACAGATATGC  50
      ||||||||||||||||||| ||| |||||||||||  |||||||||||||
seq2  AAGCACAAATCACTTCCATTTATTTACTGTGTTCC--AGAACAGATATGC  48

seq1  CTCCTTTAGAGA-GGAAAATACATATTGTAG-TAGCAGTAACT-CTTTCC  97
      |||||||||||| |||||||||||||||||| ||||||||||| ||||||
seq2  CTCCTTTAGAGAGGGAAAATACATATTGTAGTTAGCAGTAACTCCTTTCC  98

seq1  TTTCCTT-ATATGTTCTAGGGAAGAGTTTACCAATC-TCTCTTTCTAAAG  145
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  TTTCCTTAATATGTTCTAGGGAAGAGTTTACCAATCTTCTCTTTCTAAAG  148

seq1  TCCTAAGAGAAATATTCAATATTGTTAGTGATAACAATAGAGATTGTCCA  195
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCTAAGAGAAATATTCAATATTGTTAGTGATAACAATAGAGA-TGTCCA  197

seq1  GTCAGTAAAGTGTTTGCCATATAAACATAAGGATGTGATTTGGGCTTCTT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAAAGTGTTTGCCATATAAACATAAGGATGTGATTTGGGCTTCTT  247

seq1  TAAACCTATATAAAATTGCAAATGCTTGTAATATTAGCAATGTGGGAGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTATATAAAATTGCAAATGCTTGTAATATTAGCAATGTGGGAGGA  297

seq1  GAGACAGTAGGGTTGCTGGAGTTTTGCAGACCAGCTACTCTTGACAGATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGTAGGGTTGCTGGAGTTTTGCAGACCAGCTACTCTTGACAGATA  347

seq1  ATTGCATTTTTATGTTTTATGAGAGATTACATTTCAAAAATAAGATAGAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATTTTTATGTTTTATGAGAGATTACATTTCAAAAATAAGATAGAG  397

seq1  AGCAATAAAGAACACACCCACACTCACAGTCACATAAACACTCCTACGTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAAAGAACACACCCACACTCACAGTCACATAAACACTCCTACGTA  447

seq1  CTAGATATATAGATTCATATTAGATTTTTTATTATATAACTATATTAGAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATATATAGATTCATATTAGATTTTTTATTATATAACTATATTAGAG  497

seq1  ATTAGAAACATATACATATGTACATATATTAGAAAGATGAAGTCAAGTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAACATATACATATGTACATATATTAGAAAGATGAAGTCAAGTTA  547

seq1  TAAATTTGGATCTTATCATTTTACCACTTGCTTGAAAACAAAAATAGTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGGATCTTATCATTTTACCACTTGCTTGAAAACAAAAATAGTAT  597

seq1  GATCGATGCCATGAATCATTCAGTAAATTTAAGGAGGAACAAAAAATCAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGATGCCATGAATCATTCAGTAAATTTAAGGAGGAACAAAAAATCAA  647

seq1  TCAAGTATATTGCTTCTCTGAAGTAATAAGCTTCAAAGGTAGAAAGGCAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATATTGCTTCTCTGAAGTAATAAGCTTCAAAGGTAGAAAGGCAA  697

seq1  TCTGGAAATCCCAAAGAATACACACAGTCAATCATTAGGGATTATTTGAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAATCCCAAAGAATACACACAGTCAATCATTAGGGATTATTTGAA  747

seq1  TCACTTATGAAAAGAAAAGCAATACACAGGAGAACCGCAGGCGAAGAAGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTATGAAAAGAAAAGCAATACACAGGAGAACCGCAGGCGAAGAAGC  797

seq1  ATTTTGTGTGAAAGACATGCTGAGTTAGTAGTCAGGAGACTGCCTCTAGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTGAAAGACATGCTGAGTTAGTAGTCAGGAGACTGCCTCTAGT  847

seq1  ATGACTGACATAGATTCAATTAGTGAGCTTGCACAAGAGAACTTTTCTGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGACATAGATTCAATTAGTGAGCTTGCACAAGAGAACTTTTCTGG  897

seq1  GCATTACTAATCAAATTTATTGTAAATAAAAGTAAGATGCAATCGTTCCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTACTAATCAAATTTATTGTAAATAAAAGTAAGATGCAATCGTTCCT  947

seq1  CGGGTTAGTTAAGTAACTTTTACAAGAAATCTAACTTTTATAAGCAACCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTTAGTTAAGTAACTTTTACAAGAAATCTAACTTTTATAAGCAACCC  997

seq1  AGAGCTGCAGCCTTAGATGCAGGCAGAAGAAAGCTACTGATATGCTTATC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGCAGCCTTAGATGCAGGCAGAAGAAAGCTACTGATATGCTTATC  1047

seq1  CCTCTGTTTCCTGAACAAACACATTTTCTAAAAGTAAATGAAATCCCATG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTTCCTGAACAAACACATTTTCTAAAAGTAAATGAAATCCCATG  1097

seq1  GACCATTTAGCACTATTTACACACTGTTCAATGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTAGCACTATTTACACACTGTTCAATGAATTC  1135