BAC Information

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BAC

Clone NameB6Ng01-238O06
Chromosome14 (Build37)
Map Location 26,732,257 - 26,910,220
singlet/doubletdoublet
Overlap geneD14Ertd449e, Cphx, 1110051B16Rik, LOC100039468, LOC100039484, LOC100039175, LOC100039192, LOC100039213
Upstream geneLOC100039411, Zmiz1, I920194n01, LOC100039007, 4931406H21Rik, Ppif, 2310047A01Rik, Anxa11, Plac9
Downstream geneLOC100039227, LOC100039503, LOC100039246, LOC100039257, LOC100039280, LOC100039293, LOC100039527, LOC100039538, 4933413J09Rik, Slmap, LOC100039353, LOC665279, A630054L15Rik, Arf4, E430028B21Rik, 4921531P07Rik, Dnahc7c, Asb14, Appl1, Hesx1, Il17rd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238O06.bB6Ng01-238O06.g
ACCGA049465GA049466
length1,036963
definitionB6Ng01-238O06.b B6Ng01-238O06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,909,183 - 26,910,220)(26,732,257 - 26,733,202)
sequence
gaattcatacacacacacacacacacacacacacacacacacagagagag
agagagagagagagagagagagagagaggcacagaaatacacacacaact
aaaacatctttttctgaaaaaaaaaaaacagaataatagcattaaggcta
tgtttattgttttagaaccattttggtttgtttcttgctagccattgaaa
tggggtcttttcccgactgtccagtgtggtggttgtcagaaagcactgtt
cttaggctagcaagaagactcagtaggcaaaaacacttgccacaagagct
tgacagcctgaatccagtctctcgaacccataatgggaagggagaaacag
ttccttagttatcctctgatctacacactctgtgctgtctctgtctctgt
ctctgactctctctctctctctctctcacactcacacaaacaaaaattaa
ataaacaaaaattaactaaagccaggttaaagttcaacagcctatcctca
cagtgtggaactttctcaggttcttttcctaattaaggggaagggggcac
agcaccctagacttgagaacattacaaatcaaatacaagagtcaggtgcc
taggacaataagagctaggacaataagagctacaatagaagcctacactg
gaaagacttacaaactggagacattcaaaacattcagtataaagtggcta
gagagatatctcagcagttaagagtacttgctgaccaggcagtggtggtg
cacgcctttaatcccagcacttgggaggcagaggcaggcagatttctgag
ttcgaggccagcctggtctacagagtgagtttccaggacagccagggcta
cacagagaaaccctgacttgaaaaacaaacaacaaagagtacttggtgaa
gaccggggaatcagctgtggaaaacaagacttctttgtggtaaaggagcc
acactataatacatggtaattaaatttccatgcctaagaagaatagttga
gtatctaagcctgcaaacgatgttttctgttcttct
gaattcatcctcccagccgggcttggtgggcgcacgcttttaatcccagc
actcggaaatgagcccttaatgcctcctgggctgccagggaaccgtgcag
tacagaaaggatccagaatctccaggaaaagagaaggtaaaagaaagaga
ggggtcgaccatggctacatggagagaggggcggaagagagggagagaag
gagagctagagatgagagtaagaaaggtgagagcttaagagagcgaggag
gagggctggtgagatggctcagtgggtaaaagtacccgactgctcttcca
aaggtccagtgttcaagtcccagcaaccacatggtggctcacaaccatcc
gtgacaagatctgacgccctcttctggtgtgtctgaagacagctacagtg
tacttacatataataaataaattaattaaaaaaaaaaagagcgaggagga
gccaagcagctccatttatagtgggctgggctaccttgctgttgacaggt
agctgtgggaaggggcgtacctggctattgtcaggtaactatgggggtgg
agtctagctagaatgccaggagctggcttacagttccattggaggttccg
tccattgtcgtcgtagtgagaagattttgttttgagatgaggactcattg
tgttgtccaagctggcctcaaaataccaggctcactgggtgcagcctcta
atctctgcatttaggaagaggtcgaagttatctttatctacaaattgtaa
gtttaagaccacacacacacacacacacacacacacactctcagagagag
agagagagagagagagagagagagagagagagagagagaccccccggccc
cagccttttctttattgctgggggtaatagatgtacacctacacacacgc
ctccttccaggttttttatagttctccttttagtacgtttttgaaagaaa
gggcgttgtgcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_26909183_26910220
seq2: B6Ng01-238O06.b_43_1078 (reverse)

seq1  AGAAGAAAAGAAAAACATGGTTTGCAGGCTTAGGAAACAAACTTATTCTT  50
      ||||||| || ||||||| ||||||||||||| || ||  |  |||||||
seq2  AGAAGAACAG-AAAACATCGTTTGCAGGCTTA-GATACTCAACTATTCTT  48

seq1  CTAAGGCATGGAAATTTAATAACAATGTATTATAGTGTGGCTCCTTAACA  100
      || ||||||||||||||||| || |||||||||||||||||||||| || 
seq2  CTTAGGCATGGAAATTTAATTACCATGTATTATAGTGTGGCTCCTTTACC  98

seq1  ACAAAG-AGTCTTGTTTTTCCACAAGCTGAAT-CCCGGTCTTCAACAAGT  148
      |||||| ||||||| |||||||| |||||| | ||||||||||| |||||
seq2  ACAAAGAAGTCTTG-TTTTCCAC-AGCTGATTCCCCGGTCTTCACCAAGT  146

seq1  ACTCTTTTGTTTGTTTGTTTTTCAAGTCAGGGTTTCTCTGTGTAGCCCTG  198
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTT--GTTGTTTGTTTTTCAAGTCAGGGTTTCTCTGTGTAGCCCTG  194

seq1  GCTGTCCTGG-AACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAA  247
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAA  244

seq1  TCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCACCA  294

seq1  CTGCCTGGTCAGCAAGTACTCTTAACTGCTGAGATATCTCTCTAGCCAC-  346
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTGCCTGGTCAGCAAGTACTCTTAACTGCTGAGATATCTCTCTAGCCACT  344

seq1  TTATACTGAATGTTTTGAATGTCTCCAGTTTGTAAGTC-TTCCAGTGTAG  395
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTATACTGAATGTTTTGAATGTCTCCAGTTTGTAAGTCTTTCCAGTGTAG  394

seq1  GCTTCTATTGTAGCTCTTATTGTCCTAGCTCTTATTGTCCTAGGCACCTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTATTGTAGCTCTTATTGTCCTAGCTCTTATTGTCCTAGGCACCTG  444

seq1  ACTCTTGTATTTGATTTGTAATGTTCTCAAGTCTAGGGTGCTGTGCCCCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGTATTTGATTTGTAATGTTCTCAAGTCTAGGGTGCTGTGCCCCC  494

seq1  TTCCCCTTAATTAGGAAAAGAACCTGAGAAAGTTCCACACTGTGAGGATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTAATTAGGAAAAGAACCTGAGAAAGTTCCACACTGTGAGGATA  544

seq1  GGCTGTTGAACTTTAACCTGGCTTTAGTTAATTTTTGTTTATTTAATTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTGAACTTTAACCTGGCTTTAGTTAATTTTTGTTTATTTAATTTT  594

seq1  TGTTTGTGTGAGTGTGAGAGAGAGAGAGAGAGAGAGTCAGAGACAGAGAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTGAGTGTGAGAGAGAGAGAGAGAGAGAGTCAGAGACAGAGAC  644

seq1  AGAGACAGCACAGAGTGTGTAGATCAGAGGATAACTAAGGAACTGTTTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGCACAGAGTGTGTAGATCAGAGGATAACTAAGGAACTGTTTCT  694

seq1  CCCTTCCCATTATGGGTTCGAGAGACTGGATTCAGGCTGTCAAGCTCTTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCCATTATGGGTTCGAGAGACTGGATTCAGGCTGTCAAGCTCTTG  744

seq1  TGGCAAGTGTTTTTGCCTACTGAGTCTTCTTGCTAGCCTAAGAACAGTGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAGTGTTTTTGCCTACTGAGTCTTCTTGCTAGCCTAAGAACAGTGC  794

seq1  TTTCTGACAACCACCACACTGGACAGTCGGGAAAAGACCCCATTTCAATG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACAACCACCACACTGGACAGTCGGGAAAAGACCCCATTTCAATG  844

seq1  GCTAGCAAGAAACAAACCAAAATGGTTCTAAAACAATAAACATAGCCTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCAAGAAACAAACCAAAATGGTTCTAAAACAATAAACATAGCCTTA  894

seq1  ATGCTATTATTCTGTTTTTTTTTTTTTCAGAAAAAGATGTTTTAGTTGTG  945
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGCTATTATTCTG-TTTTTTTTTTTTCAGAAAAAGATGTTTTAGTTGTG  943

seq1  TGTGTATTTCTGTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTTCTGTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  993

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAATTC  1036

seq1: chr14_26732257_26733202
seq2: B6Ng01-238O06.g_70_1032

seq1  GAATTCATCCTCCCAGCCGGGCTTGGTGGGCGCACGCTTTTAATCCCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCTCCCAGCCGGGCTTGGTGGGCGCACGCTTTTAATCCCAGC  50

seq1  ACTCGGAAATGAGCCCTTAATGCCTCCTGGGCTGCCAGGGAACCGTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCGGAAATGAGCCCTTAATGCCTCCTGGGCTGCCAGGGAACCGTGCAG  100

seq1  TACAGAAAGGATCCAGAATCTCCAGGAAAAGAGAAGGTAAAAGAAAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAAGGATCCAGAATCTCCAGGAAAAGAGAAGGTAAAAGAAAGAGA  150

seq1  GGGGTCGACCATGGCTACATGGAGAGAGGGGCGGAAGAGAGGGAGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCGACCATGGCTACATGGAGAGAGGGGCGGAAGAGAGGGAGAGAAG  200

seq1  GAGAGCTAGAGATGAGAGTAAGAAAGGTGAGAGCTTAAGAGAGCGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTAGAGATGAGAGTAAGAAAGGTGAGAGCTTAAGAGAGCGAGGAG  250

seq1  GAGGGCTGGTGAGATGGCTCAGTGGGTAAAAGTACCCGACTGCTCTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTGGTGAGATGGCTCAGTGGGTAAAAGTACCCGACTGCTCTTCCA  300

seq1  AAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCCAGTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCC  350

seq1  GTGACAAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTG  400

seq1  TACTTACATATAATAAATAAATTAATTAAAAAAAAAAAGAGCGAGGAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACATATAATAAATAAATTAATTAAAAAAAAAAAGAGCGAGGAGGA  450

seq1  GCCAAGCAGCTCCATTTATAGTGGGCTGGGCTACCTTGCTGTTGACAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGCAGCTCCATTTATAGTGGGCTGGGCTACCTTGCTGTTGACAGGT  500

seq1  AGCTGTGGGAAGGGGCGTACCTGGCTATTGTCAGGTAACTATGGGGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGGGAAGGGGCGTACCTGGCTATTGTCAGGTAACTATGGGGGTGG  550

seq1  AGTCTAGCTAGAATGCCAGGAGCTGGCTTACAGTTCCATTGGAGGTTCCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGCTAGAATGCCAGGAGCTGGCTTACAGTTCCATTGGAGGTTCCG  600

seq1  TCCATTGTCGTCGTAGTGAGAAGATTTTG-TTTGAGATGAGGACTCATTG  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCCATTGTCGTCGTAGTGAGAAGATTTTGTTTTGAGATGAGGACTCATTG  650

seq1  TGTTGTCCAAGCTGGCCTCAAAATACCAGGCTCACTGGGTGCAGCCTCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCCAAGCTGGCCTCAAAATACCAGGCTCACTGGGTGCAGCCTCTA  700

seq1  ATCTCTGCATTTAGGAAGAGGTCGAAGTTATCTTTATCTACAAA-TGT-A  747
      |||||||||||||||||||||||||||||||||||||||||||| ||| |
seq2  ATCTCTGCATTTAGGAAGAGGTCGAAGTTATCTTTATCTACAAATTGTAA  750

seq1  GTTTAAGACCACACACACACACACACACACACACACACACACAGAGAGAG  797
      |||||||||||||||||||||||||||||||||||||| | |||||||||
seq2  GTTTAAGACCACACACACACACACACACACACACACACTCTCAGAGAGAG  800

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAACACCCTGCCC  847
      ||||||||||||||||||||||||||||||||||||||| | ||| ||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCCCCCGGCCC  850

seq1  CAGCC--TTCCTTATAGCTGGGGCT-ATAGATGT-CA-CTACACACACGC  892
      |||||  ||| |||| ||||||| | |||||||| || ||||||||||||
seq2  CAGCCTTTTCTTTATTGCTGGGGGTAATAGATGTACACCTACACACACGC  900

seq1  --TCTTCCAGGTTTTT--AAGTTCT-CTTTTAG-AAGGTTTTGAA--GAA  934
         |||||||||||||   |||||| ||||||| | | |||||||   ||
seq2  CTCCTTCCAGGTTTTTTATAGTTCTCCTTTTAGTACGTTTTTGAAAGAAA  950

seq1  GGGCG-TGTGCAC  946
      ||||| |||||||
seq2  GGGCGTTGTGCAC  963