BAC Information

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BAC

Clone NameB6Ng01-239F22
Chromosome14 (Build37)
Map Location 112,447,358 - 112,448,063
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043494, Slitrk5, LOC100043501
Downstream geneEG223186, LOC100043509
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239F22.bB6Ng01-239F22.g
ACCGA049814GA049815
length9901,181
definitionB6Ng01-239F22.b B6Ng01-239F22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatacatacttcattctactcagttgtccttcatctaagaatag
aatatagtggtcctgtaaaagaaaggaattcctcatttttaatgtgtagc
actaataagccttttaaaaatgttccatggatttctgatgggattttttt
ttccatgtcaatccaaacatatgtgttccaccaaattgacatacacttag
tgtccaaattgacatacacttagtgtccaaactgtggatctcatgtcata
tacactcaagatagatacagatatgattcaaatgcctttaatcccagcac
ttgggagttccaggacagccaaggctatacagagaagccctgtctcagaa
aaacaaaacaaaacaaacaaacaaacaaataaataaataactttaaacac
tgcccccaaaaggcaatcctttgcccacaaaccttctcctccctccctgt
tccttaagagtcaatccctgtttctcatccttacctatgcaaaaggaaac
cagagcaaccttcccttaccccttcccatgttgtggattctattagccaa
cccctcctaacctttccctctcattgttttattccatcccccaagtctac
agagaattccttcctcactacaacccatacctgccaaaacaaacaaaaac
aaacaacaaacaaacaaaaacaagaaggctaatgtcaggcctttacctct
tgttactccagaccaaatccccaaatcttctccctactgctgcaatagaa
cattaccacctttcctcactattccccacatctcctgtggaacccatggg
ccaactcatcttaaccttcttccctatactaggcaccatatcatggtctc
caggtcctaaagacaccccctaccaagccagccataggttatgcctccca
gataagcagtgggctgcctgatttttcttctccctatatttccccacata
ctatctccccacatactatccccagtcatcattagtacta

gaattctcacctgaggaataccgaatggctgagaaacacctaaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggatcctca
gaaaattggacatagtactacctgaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaaaaaatgaatttatgaaattcctaggta
aatggatggacctggagggcatcatcctgaatgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatgcaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagaattggga
acaaaacacccatggaaggagtttcaaagacaaagtttggagctgagatg
aaaggatggatcatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatatactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaa
cacagaagtggatgttcacagtcagctaatggatggatcacagggctccc
aatggaggagctagagaaagtacccaagggagctaaagggatctgcaacc
ctataggtggacaacattatgaactaccagtacctggagctcgtgactct
agctgcatatttatcaaaagatggctagtcgccatcactgggaaaggaga
ggcccattgcacaatgccaaacttaatatgccagtacagggacgtcaggt
caaaggtaatggcgttaggatgggagagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_112447358_112448063
seq2: B6Ng01-239F22.b_46_751

seq1  GAATTCCATACATACTTCATTCTACTCAGTTGTCCTTCATCTAAGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACATACTTCATTCTACTCAGTTGTCCTTCATCTAAGAATAG  50

seq1  AATATAGTGGTCCTGTAAAAGAAAGGAATTCCTCATTTTTAATGTGTAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGTGGTCCTGTAAAAGAAAGGAATTCCTCATTTTTAATGTGTAGC  100

seq1  ACTAATAAGCCTTTTAAAAATGTTCCATGGATTTCTGATGGGATTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAAGCCTTTTAAAAATGTTCCATGGATTTCTGATGGGATTTTTTT  150

seq1  TTCCATGTCAATCCAAACATATGTGTTCCACCAAATTGACATACACTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGTCAATCCAAACATATGTGTTCCACCAAATTGACATACACTTAG  200

seq1  TGTCCAAATTGACATACACTTAGTGTCCAAACTGTGGATCTCATGTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAAATTGACATACACTTAGTGTCCAAACTGTGGATCTCATGTCATA  250

seq1  TACACTCAAGATAGATACAGATATGATTCAAATGCCTTTAATCCCAGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTCAAGATAGATACAGATATGATTCAAATGCCTTTAATCCCAGCAC  300

seq1  TTGGGAGTTCCAGGACAGCCAAGGCTATACAGAGAAGCCCTGTCTCAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGTTCCAGGACAGCCAAGGCTATACAGAGAAGCCCTGTCTCAGAA  350

seq1  AAACAAAACAAAACAAACAAACAAACAAATAAATAAATAACTTTAAACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACAAACAAACAAACAAATAAATAAATAACTTTAAACAC  400

seq1  TGCCCCCAAAAGGCAATCCTTTGCCCACAAACCTTCTCCTCCCTCCCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCCAAAAGGCAATCCTTTGCCCACAAACCTTCTCCTCCCTCCCTGT  450

seq1  TCCTTAAGAGTCAATCCCTGTTTCTCATCCTTACCTATGCAAAAGGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGAGTCAATCCCTGTTTCTCATCCTTACCTATGCAAAAGGAAAC  500

seq1  CAGAGCAACCTTCCCTTACCCCTTCCCATGTTGTGGATTCTATTAGCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAACCTTCCCTTACCCCTTCCCATGTTGTGGATTCTATTAGCCAA  550

seq1  CCCCTCCTAACCTTTCCCTCTCATTGTTTTATTCCATCCCCCAAGTCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTAACCTTTCCCTCTCATTGTTTTATTCCATCCCCCAAGTCTAC  600

seq1  AGAGAATTCCTTCCTCACTACAACCCATACCTGCCAAAACAAACAAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTCCTTCCTCACTACAACCCATACCTGCCAAAACAAACAAAAAC  650

seq1  AAACAACAAACAAACAAAAACAAGAAGGCTAATGTCAGGCCTTTACCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAACAAACAAACAAAAACAAGAAGGCTAATGTCAGGCCTTTACCTCT  700

seq1  TGTTAC  706
      ||||||
seq2  TGTTAC  706


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