BAC Information

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BAC

Clone NameB6Ng01-239P07
Chromosome14 (Build37)
Map Location 110,930,611 - 110,931,707
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC640892
Downstream geneSlitrk6, EG668772, EG622052, LOC100043491, LOC100043494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239P07.bB6Ng01-239P07.g
ACCGA050247GA050248
length1,1321,157
definitionB6Ng01-239P07.b B6Ng01-239P07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaagggcagaggtgggtgggggtgtgtagcatatgctcagagg
agaggaggaaccaagatgggggaagaattttgagagaggctgatttggag
gagcaagtaagggagatataagcataataaataaattgatgatgatgatg
attatagtaataataataataaagaaagaaagcattggtgaaggaaaaca
gaaaaagagaaagttcttaaacactggaggcagagtgaacccatgagtgt
gaaacatcttgtgatccgtgtgacagcaagtcagcacacatccctaaaca
tcagcagcacatccgtagtggaactctgtttcaaatatgaaaaaacaaaa
caaaaacttttattgtataacgttcaagatataatcaaaaaagaacaatt
actcttctggctcagcaatagcctaccctaagtaaaatagtgacttgtgc
caacacgacaggagtctgacattctaggcaagtacagctttccagcccct
tgtacaaacaagttttaagttgttgactacatttataagcttcatctaac
actaaaagtacaggtttcttctctccattaggtgtaagtcataaaattac
aaaatttatcccttttgaattcaacacagttaaaaataaactagtatatg
tcaaatggaagttatgattttttttattggttatgttccttttttctgtg
tttcttctgaaatgaaccaggtttcctcagcaaatgcttaggacatatgc
atcccttttggatttttaacttttacaaagacatcactgaactgtgagac
ctaattaaggtatattcaacttcagactgaccaataattttctttgtcct
tagcacagtacttactatgagattttcattggtgtcaagaatttggtgat
agaatatatggaaacacaataatgaaaagaattccaggaccacttggggc
tatgttgaatagaaattaggttcaccatgtactactacattattacatgc
ctcgaatagaattgattactttcagagttttccttgtggtaaatttatta
ttccagaagctgggaacattagtcccaggttcttgaatctttaattcacc
atttagtaaacaggtcttgtgtacacactatg

gaattctcacctgaggaataccgaatggcagagaagcagctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaatactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcgtttcctca
gaaaattggacatagtactacctggaggatccagcaatacctctcctggg
catatccagaagatgtcccaatcggttagaaggacacctgatccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtggcacatttacacaatgg
agtactactcagctattaagaagaatgaatttatgaaattcctaggatgg
acctggagggcatcatcctgagtgaggtaacacattcacaaaggaactca
cacaatatgtactcactgataagtagatattagcctaaaacctaggatac
ccaagatataagatacaatttgctaaacaaatgaaactcaagaagaatga
agactgaagtgtggacactatgctcctccttagaattgggaacaaaacac
ccatggaaggagttacagagacaaagttcagagctgagacgaaaggatgg
accatctagaaactgccatatccagggatccaccccataatcagcttcta
aacgctgacaccattgaatacactagcaagattttattgaaaggacccag
atgtagctgtctcttgtgagaatatgccggggcctagcaaacacagaagt
ggatgctcacagtcagctattggatggatcacagggctcccaatggagga
gctagagaaagtacccaagagctaaagggatctgcagccttatgggtgga
cacatatgaactaacagtaccccgagctctgactctagctgcatattgtt
atcaaagatgctagtcgcatcaatgaaagaagagtcaattgacaccgcta
acctgatatcccagtacagaacgctagtcaaaaggtattggtggataagg
gaaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_110930611_110931707
seq2: B6Ng01-239P07.b_46_1177

seq1  GAATTCCCAAGGGCAGAGGTGGGTGGGGGTGTGTAGCATATGCTCAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGGGCAGAGGTGGGTGGGGGTGTGTAGCATATGCTCAGAGG  50

seq1  AGAGGAGGAACCAAGATGGGGGAAGAATTTTGAGAGAGGCTGATTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGGAACCAAGATGGGGGAAGAATTTTGAGAGAGGCTGATTTGGAG  100

seq1  GAGCAAGTAAGGGAGATATAAGCATAATAAATAAATTGATGATGATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGTAAGGGAGATATAAGCATAATAAATAAATTGATGATGATGATG  150

seq1  ATTATAGTAATAATAATAATAAAGAAAGAAAGCATTGGTGAAGGAAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTAATAATAATAATAAAGAAAGAAAGCATTGGTGAAGGAAAACA  200

seq1  GAAAAAGAGAAAGTTCTTAAACACTGGAGGCAGAGTGAACCCATGAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGAAAGTTCTTAAACACTGGAGGCAGAGTGAACCCATGAGTGT  250

seq1  GAAACATCTTGTGATCCGTGTGACAGCAAGTCAGCACACATCCCTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATCTTGTGATCCGTGTGACAGCAAGTCAGCACACATCCCTAAACA  300

seq1  TCAGCAGCACATCCGTAGTGGAACTCTGTTTCAAATATGAAAAAACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGCACATCCGTAGTGGAACTCTGTTTCAAATATGAAAAAACAAAA  350

seq1  CAAAAACTTTTATTGTATAACGTTCAAGATATAATCAAAAAAGAACAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTTTTATTGTATAACGTTCAAGATATAATCAAAAAAGAACAATT  400

seq1  ACTCTTCTGGCTCAGCAATAGCCTACCCTAAGTAAAATAGTGACTTGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCTGGCTCAGCAATAGCCTACCCTAAGTAAAATAGTGACTTGTGC  450

seq1  CAACACGACAGGAGTCTGACATTCTAGGCAAGTACAGCTTTCCAGCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACGACAGGAGTCTGACATTCTAGGCAAGTACAGCTTTCCAGCCCCT  500

seq1  TGTACAAACAAGTTTTAAGTTGTTGACTACATTTATAAGCTTCATCTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAACAAGTTTTAAGTTGTTGACTACATTTATAAGCTTCATCTAAC  550

seq1  ACTAAAAGTACAGGTTTCTTCTCTCCATTAGGTGTAAGTCATAAAATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAGTACAGGTTTCTTCTCTCCATTAGGTGTAAGTCATAAAATTAC  600

seq1  AAAATTTATCCCTTTTGAATTCAACACAGTTAAAAATAAACTAGTATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTATCCCTTTTGAATTCAACACAGTTAAAAATAAACTAGTATATG  650

seq1  TCAAATGGAAGTTATGATTTTTTTTATTGGTTATGTTCC-TTTTTCTGTG  699
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCAAATGGAAGTTATGATTTTTTTTATTGGTTATGTTCCTTTTTTCTGTG  700

seq1  TTTC-TCTGAAATGAACCAGGTTTCCTCAGCAAATGCTTAGGACATATGC  748
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCTGAAATGAACCAGGTTTCCTCAGCAAATGCTTAGGACATATGC  750

seq1  ATCCC-TTTGGA-TTTTAAC-TTTACAAAGACATCACTGAACTGTGAGAC  795
      ||||| |||||| ||||||| |||||||||||||||||||||||||||||
seq2  ATCCCTTTTGGATTTTTAACTTTTACAAAGACATCACTGAACTGTGAGAC  800

seq1  CTAATTAAGGTATATTCAACTTCAGACTGACCAATAATTT--CTTGTCCT  843
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  CTAATTAAGGTATATTCAACTTCAGACTGACCAATAATTTTCTTTGTCCT  850

seq1  TAGCACAGTAC-TACTATGAGA-TTTCATTGGTGTCCAGAA-TTGGTGAT  890
      ||||||||||| |||||||||| ||||||||||||| |||| ||||||||
seq2  TAGCACAGTACTTACTATGAGATTTTCATTGGTGTCAAGAATTTGGTGAT  900

seq1  AG-ATATATGG-AACAC-ATAATGAAAAGAATTCCAGGA-CACTT-GGGC  935
      || |||||||| ||||| ||||||||||||||||||||| ||||| ||||
seq2  AGAATATATGGAAACACAATAATGAAAAGAATTCCAGGACCACTTGGGGC  950

seq1  TATGTTG-ATAG-AATTA-GTTCACAATGTACTACTACA-TATTACA--G  979
      ||||||| |||| ||||| |||||| ||||||||||||| |||||||   
seq2  TATGTTGAATAGAAATTAGGTTCACCATGTACTACTACATTATTACATGC  1000

seq1  CTTGGATAGAATTGATAAC-TTCAGAGTTT--CCTGT-GTAAA-TTATTA  1024
      || | ||||||||||| || ||||||||||  | ||| ||||| ||||||
seq2  CTCGAATAGAATTGATTACTTTCAGAGTTTTCCTTGTGGTAAATTTATTA  1050

seq1  TCCCAGAA-CTGG--ACATTCAGT-CCAGGTTC-TGAATCTTTAATTCAC  1069
      | |||||| ||||  ||||| ||| |||||||| ||||||||||||||||
seq2  TTCCAGAAGCTGGGAACATT-AGTCCCAGGTTCTTGAATCTTTAATTCAC  1099

seq1  CA-TTAGTAAACA-GTCT--TGTACACA-TATG  1097
      || |||||||||| ||||  |||||||| ||||
seq2  CATTTAGTAAACAGGTCTTGTGTACACACTATG  1132


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