BAC Information

Click to search

BAC

Clone NameB6Ng01-241A24
Chromosome14 (Build37)
Map Location 22,896,436 - 23,072,708
singlet/doubletdoublet
Overlap gene1700112E06Rik
Upstream geneAdk, Myst4, EG435391, Dusp13, Samd8, Vdac2, Comtd1, Zfp503, EG665075
Downstream geneEG435392, LOC665068
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241A24.bB6Ng01-241A24.g
ACCGA051073GA051074
length1,116823
definitionB6Ng01-241A24.b B6Ng01-241A24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,071,599 - 23,072,708)(22,896,436 - 22,897,241)
sequence
gaattctttgatggaatagaactcagttttcaaaaatgtttgaaattaca
gcttgacctggtagctcatgcctataatcccagaatccaagaggccaaag
cagaaatagtgtccaagaattcaaggccaccttgagatacatagtaaatt
ccaggccaacacaatctatagagtgagaccctgcctcagacaaatacaga
cggggaacaagaagtcagtatatacaatcttgtgttacaacaaaaagaca
agacacaaactggggtgttagctcccatttcaacagaaggcattatgatt
ctgagaaaagacagatgtgtacaaataaaaatatgtatgcggcagaaata
aaagataattcttcatatctttctgtctgtttgatatacttcctctggtt
gtatttcagagtcctatgtcaattaaaaatatttcaaatgggctggagct
caggggatggagggtcagataaattttgttatacaaggacaggtagataa
atagaatgaactcaggttgcaaaacaaaaaaaaacaaaacaaaaaaaaac
cctccatgataagaggatgatgaaggtgggcagagggtctacatctgctt
aatgtgctgaaggccagactctgaagaaataactatagaaacgccaccca
acctactgggtcttgctcaagatttctcctgtgaacctaaccacagctgt
tgggtatgcaatgttttgctaaatcaaaatagaatatgcagtttagatat
ttttgtgttttgttttaattccttattgtttaaagaagtctatactcctt
ggggatttatgggagcagcgttatttatcagcattttagagagcgcgggt
ggccactgcaccaccaagctcatgagatcttagtactcacttcaaaacaa
gccctcagaaataacaatcaaattatgttagtgaacatacaactcattcc
aaaagaaaaaatccacaagctgttgttgtggtctctgcagcaacatcaag
ggctcttcttgaacagccaaccatctattgcttttagaataatcttctcc
cagatagtttctgaccaaaaaatagaaacgaaaaggttgaattgggggaa
tgcttggtgcctcagt
gaattctctggtgacagatggagggagtgccttggggtagctgttcttta
tagtgtgggctgctgtaaaaccaggggggcatgcttgctgggtcctggag
ctctgggatgtaggtctctctctgtgttccaatgaggtgcttaggggaag
gctgtggagggacatgctgctgttctgtcccttcctgtaccaatccaaca
actctctgtcctttgtaagaatggaggtttctaaatcagaaactgggcca
tgcaatccagggagtctgccaacctccaacccaaagtgcagtctctgtag
actgggatccttttcttttgggtcattttgaatctctttagagcttatgg
aatagattctatgagacctgcaggattttacaaaggtctgggagtcctca
taatggtagctggagtctggctcagaaaagttgggaagaaaatgaatgtt
ggagacccatgtgatatgactttggagagataatttgaaacttaagtttt
attttttttttaatgtataaaacaaggctgtataatagtagaaaatgaaa
ttaagtgtaaactgtccagtgttagagtaggtgttcaataaactcacttc
cttttattttaattttactgtatcaagtgcttgataaaatagttttcaca
ttactgggtttttatcaaaaagcttagaaaacactgggggccggggagat
gaactcagtaggcaaagggcttgtttctgcgaaacacggggatctcagtt
tgattccccagggcttactcagttgctgcttggctgtgtttggtgataaa
cattctgttctgcatcactggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_23071599_23072708
seq2: B6Ng01-241A24.b_46_1161 (reverse)

seq1  ACTGAGCCA-CAAGCAATCCCCAAATACAACCTTTTCCTTTCTTATTTTT  49
      |||||| || |||||| ||||| ||| |||||||||| |||| |||||||
seq2  ACTGAGGCACCAAGCATTCCCCCAATTCAACCTTTTCGTTTC-TATTTTT  49

seq1  TGTTCAGAAAACTATCTGGGGAGAAGATTA-TCTAAAAGCAATAGATGGT  98
      || |||| ||||||||| |||||||||||| |||||||||||||||||||
seq2  TGGTCAG-AAACTATCT-GGGAGAAGATTATTCTAAAAGCAATAGATGGT  97

seq1  TGGCTGTTC-AGAAGAGCCCCTTTGATGTAGCTGCAGAGACCAC-ACAAC  146
      ||||||||| ||||||||||  ||||||| |||||||||||||| |||||
seq2  TGGCTGTTCAAGAAGAGCCC--TTGATGTTGCTGCAGAGACCACAACAAC  145

seq1  AGCCTTGTGGA-TTTTTCTTTT-GAATGAGTTGTATG-TCACTAACAT-A  192
      || |||||||| |||||||||| |||||||||||||| |||||||||| |
seq2  AG-CTTGTGGATTTTTTCTTTTGGAATGAGTTGTATGTTCACTAACATAA  194

seq1  TTTGATTGTTATTTCTGA-GGCTTGTTTTGAAGTGAGTACTAAGATCTCA  241
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTGATTGTTATTTCTGAGGGCTTGTTTTGAAGTGAGTACTAAGATCTCA  244

seq1  TGAGCTTGGTGGTGCCAGTGGCCACCCGCGCTCTCT-AAATGCTGATAAA  290
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  TGAGCTTGGTGGTG-CAGTGGCCACCCGCGCTCTCTAAAATGCTGATAAA  293

seq1  TAACGCTGCTCCCATAAAT-CCCAAGGAGTATAGACTTCTTTAAACAATA  339
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TAACGCTGCTCCCATAAATCCCCAAGGAGTATAGACTTCTTTAAACAATA  343

seq1  AGGAATTAAAACAAAACACAAAAATATCTAAACTGCATATTCTATTTTGA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTAAAACAAAACACAAAAATATCTAAACTGCATATTCTATTTTGA  393

seq1  TTTAGC-AAACATTGCATACCCAACAGCTGTGGTTAGGTTCACAGGAG-A  437
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTAGCAAAACATTGCATACCCAACAGCTGTGGTTAGGTTCACAGGAGAA  443

seq1  ATCTTGAGCAAGACCCAGTAGGTTGGGTGGCGTTTCTATAGTTATTTCTT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGCAAGACCCAGTAGGTTGGGTGGCGTTTCTATAGTTATTTCTT  493

seq1  CAGAGTCTGGCCTTCAGCACATTAAGCAGATGTAGACCCTCTGCCCACCT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCTGGCCTTCAGCACATTAAGCAGATGTAGACCCTCTGCCCACCT  543

seq1  TCATCATCCTCTTATCATGGAGGGTTTTTTTTTGTTTTGTTTTTTTTTGT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCCTCTTATCATGGAGGGTTTTTTTTTGTTTTGTTTTTTTTTGT  593

seq1  TTTGCAACCTGAGTTCATTCTATTTATCTACCTGTCCTTGTATAACAAAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAACCTGAGTTCATTCTATTTATCTACCTGTCCTTGTATAACAAAA  643

seq1  TTTATCTGACCCTCCATCCCCTGAGCTCCAGCCCATTTGAAATATTTTTA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTGACCCTCCATCCCCTGAGCTCCAGCCCATTTGAAATATTTTTA  693

seq1  ATTGACATAGGACTCTGAAATACAACCAGAGGAAGTATATCAAACAGACA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACATAGGACTCTGAAATACAACCAGAGGAAGTATATCAAACAGACA  743

seq1  GAAAGATATGAAGAATTATCTTTTATTTCTGCCGCATACATATTTTTATT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGATATGAAGAATTATCTTTTATTTCTGCCGCATACATATTTTTATT  793

seq1  TGTACACATCTGTCTTTTCTCAGAATCATAATGCCTTCTGTTGAAATGGG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACACATCTGTCTTTTCTCAGAATCATAATGCCTTCTGTTGAAATGGG  843

seq1  AGCTAACACCCCAGTTTGTGTCTTGTCTTTTTGTTGTAACACAAGATTGT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACACCCCAGTTTGTGTCTTGTCTTTTTGTTGTAACACAAGATTGT  893

seq1  ATATACTGACTTCTTGTTCCCCGTCTGTATTTGTCTGAGGCAGGGTCTCA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGACTTCTTGTTCCCCGTCTGTATTTGTCTGAGGCAGGGTCTCA  943

seq1  CTCTATAGATTGTGTTGGCCTGGAATTTACTATGTATCTCAAGGTGGCCT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAGATTGTGTTGGCCTGGAATTTACTATGTATCTCAAGGTGGCCT  993

seq1  TGAATTCTTGGACACTATTTCTGCTTTGGCCTCTTGGATTCTGGGATTAT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCTTGGACACTATTTCTGCTTTGGCCTCTTGGATTCTGGGATTAT  1043

seq1  AGGCATGAGCTACCAGGTCAAGCTGTAATTTCAAACATTTTTGAAAACTG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGAGCTACCAGGTCAAGCTGTAATTTCAAACATTTTTGAAAACTG  1093

seq1  AGTTCTATTCCATCAAAGAATTC  1110
      |||||||||||||||||||||||
seq2  AGTTCTATTCCATCAAAGAATTC  1116

seq1: chr14_22896436_22897241
seq2: B6Ng01-241A24.g_71_893

seq1  GAATTCTCTGGTGACAGATGGAGGGAGTGCCTTGGGGTAGCTGTTCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGTGACAGATGGAGGGAGTGCCTTGGGGTAGCTGTTCTTTA  50

seq1  TAGTGTGGGCTGCTGTAAAACCAGGGGGGCATGCTTGCTGGGTCCTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGGGCTGCTGTAAAACCAGGGGGGCATGCTTGCTGGGTCCTGGAG  100

seq1  CTCTGGGATGTAGGTCTCTCTCTGTGTTCCAATGAGGTGCTTAGGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGGATGTAGGTCTCTCTCTGTGTTCCAATGAGGTGCTTAGGGGAAG  150

seq1  GCTGTGGAGGGACATGCTGCTGTTCTGTCCCTTCCTGTACCAATCCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGAGGGACATGCTGCTGTTCTGTCCCTTCCTGTACCAATCCAACA  200

seq1  ACTCTCTGTCCTTTGTAAGAATGGAGGTTTCTAAATCAGAAACTGGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTGTCCTTTGTAAGAATGGAGGTTTCTAAATCAGAAACTGGGCCA  250

seq1  TGCAATCCAGGGAGTCTGCCAACCTCCAACCCAAAGTGCAGTCTCTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCCAGGGAGTCTGCCAACCTCCAACCCAAAGTGCAGTCTCTGTAG  300

seq1  ACTGGGATCCTTTTCTTTTGGGTCATTTTGAATCTCTTTAGAGCTTATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGATCCTTTTCTTTTGGGTCATTTTGAATCTCTTTAGAGCTTATGG  350

seq1  AATAGATTCTATGAGACCTGCAGGATTTTACAAAGGTCTGGGAGTCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTCTATGAGACCTGCAGGATTTTACAAAGGTCTGGGAGTCCTCA  400

seq1  TAATGGTAGCTGGAGTCTGGCTCAGAAAAGTTGGGAAGAAAATGAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTAGCTGGAGTCTGGCTCAGAAAAGTTGGGAAGAAAATGAATGTT  450

seq1  GGAGACCCATGTGATATGACTTTGGAGAGATAATTTGAAACTTAAGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCCATGTGATATGACTTTGGAGAGATAATTTGAAACTTAAGTTTT  500

seq1  A-TTTTTTTTTAATGTATAAAACAAGGCTGTATAATAGTAGAAAATGAAA  549
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTTAATGTATAAAACAAGGCTGTATAATAGTAGAAAATGAAA  550

seq1  TTAAGTGTAAACTGTCCAGTG-TAGAGTAGGTGTTCAATAAACTCACTTC  598
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTAAGTGTAAACTGTCCAGTGTTAGAGTAGGTGTTCAATAAACTCACTTC  600

seq1  C-TTTATTT--AATTTACTGTATCAAGTGCTTGAT-AAATAG-TTTCACA  643
      | |||||||  | |||||||||||||||||||||| |||||| |||||||
seq2  CTTTTATTTTAATTTTACTGTATCAAGTGCTTGATAAAATAGTTTTCACA  650

seq1  -TACTGG--TTTTATC-AAAAGCTTAG-AAACACT-GGGGCCGGGGAGAT  687
       ||||||  ||||||| |||||||||| ||||||| ||||||||||||||
seq2  TTACTGGGTTTTTATCAAAAAGCTTAGAAAACACTGGGGGCCGGGGAGAT  700

seq1  G-ACTCAGTAGGCAAAGGGCTTG-TTCTGCG-AACACGGGGATCTCAGTT  734
      | ||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  GAACTCAGTAGGCAAAGGGCTTGTTTCTGCGAAACACGGGGATCTCAGTT  750

seq1  TGATTCCCCAGGGCTTACTCAGCTGCTGCTTGGCTGTGTTTGGTGATAGA  784
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  TGATTCCCCAGGGCTTACTCAGTTGCTGCTTGGCTGTGTTTGGTGATAAA  800

seq1  CA-TCTGTACTGCAACACTGGTG  806
      || ||||| ||||| ||||||||
seq2  CATTCTGTTCTGCATCACTGGTG  823