BAC Information

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BAC

Clone NameB6Ng01-241N07
Chromosome14 (Build37)
Map Location 102,224,999 - 102,350,440
singlet/doubletdoublet
Overlap geneLmo7, LOC100043795
Upstream gene1700110M21Rik, LOC100043421, LOC382936, Tbc1d4, Commd6, Uchl3
Downstream geneLOC545567, LOC669278
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241N07.bB6Ng01-241N07.g
ACCGA051647GA051648
length6741,112
definitionB6Ng01-241N07.b B6Ng01-241N07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,224,999 - 102,225,672)(102,349,327 - 102,350,440)
sequence
gaattcttatatacagttttggggtgggtaagggtctgacagcaggtact
tctcattggtttgatctgagagatttggagaaaccttatttgcatgtggg
agggcttagtgctgctcttacatgactgatgatcacacacctttttgcag
ggagctgtaggaggctgtagctgcaacaggagcagggggctggggagggg
gagcccaagaggtatggtcgaccaccttctgtctcatgcaggtggaaatc
agcacccaccaggtactggggttccagacctttgctcgaccagggaccat
acagtctgtgcacagcccactgccctataacgaattaaaaaatagttttc
tttctcctgtaactcatcgatggagcaaatgtttcaacgttccatttagt
gtgttctattttttcatcaattaaagatataaacatttatatgcatgtgt
agagtattagtaatgttgatgctattgatttttgttactaatattaagac
aaactaacattaacactatacaatactttattatttgttttctaaaatag
aatgtgatatagtaaaattcttttttccttttatcattatctatgttaga
aaatgtgtcctatttaaaggattgcaacttccatattcatttattattat
gtaggtggtatgtatgtatgatat

gaattctttacacaccactgaacactgggtattgcatggccctgggggtg
ctctgccagaatccaaatcataaattacaggtcaggctagccatgggaga
ggaaaaacaagagttatttccttctcactattctgcccattccctcacag
ctgaggtgctcttagttttatccactaacaaaataataaagcatatgtaa
gaaaactggagcttattattaatttatataaattaaaaaaaaaacacgag
ttagcatcatgtctacttccttatcgcaactgtacagctttcttcagagg
ttgaaataccttttggccactgtattcagatttccctttcatattaactg
cattccctctgtccctatgagctatgcataataaaaaaagaaaaaaccag
gttgtagtcgttatgtcacgaacaaatggaaacaaaaaaaaatattctca
aatcctcatccctggttctagaaactggctgttctctcacgctcttccag
tggttgacatcattctgttgggacacacaatactctggagtcaataagat
gggctctgtcatatgtagctggtatttggcacaaagaaaagacaaatttc
agcaagagaatattgaggtacatgggtgggagacgttaataaatcaccca
ttcaacattcgtgtctgtatcctctaaagtggagaaccccaatacggagg
tcatgaacccactggctattaggatagcatgttataaagagaggtagaag
aatccatgtgttcaaaaaataccacctcaaacactctcagcaccataatg
tctcacacacatagctattactgcttttaatcttatacagcttatataac
tgctcatttatgagataccaatgcaaagtgctattaaatccattgtgatt
ttgcaattatacactatgccataattgtgtgatagagattaaatatcatt
atgtatgagttactagaaaaataactgaagttttgtgagtttaaaaagcc
aagaaaattagagcctgtgagaatgggttctgtggtcttgtggggtgagt
gctgcctccaaccagttccctgagttgcttctgaatctctgcactgtgcc
tggcacatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_102224999_102225672
seq2: B6Ng01-241N07.b_48_721

seq1  GAATTCTTATATACAGTTTTGGGGTGGGTAAGGGTCTGACAGCAGGTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATATACAGTTTTGGGGTGGGTAAGGGTCTGACAGCAGGTACT  50

seq1  TCTCATTGGTTTGATCTGAGAGATTTGGAGAAACCTTATTTGCATGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTGGTTTGATCTGAGAGATTTGGAGAAACCTTATTTGCATGTGGG  100

seq1  AGGGCTTAGTGCTGCTCTTACATGACTGATGATCACACACCTTTTTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTAGTGCTGCTCTTACATGACTGATGATCACACACCTTTTTGCAG  150

seq1  GGAGCTGTAGGAGGCTGTAGCTGCAACAGGAGCAGGGGGCTGGGGAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGTAGGAGGCTGTAGCTGCAACAGGAGCAGGGGGCTGGGGAGGGG  200

seq1  GAGCCCAAGAGGTATGGTCGACCACCTTCTGTCTCATGCAGGTGGAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAAGAGGTATGGTCGACCACCTTCTGTCTCATGCAGGTGGAAATC  250

seq1  AGCACCCACCAGGTACTGGGGTTCCAGACCTTTGCTCGACCAGGGACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCCACCAGGTACTGGGGTTCCAGACCTTTGCTCGACCAGGGACCAT  300

seq1  ACAGTCTGTGCACAGCCCACTGCCCTATAACGAATTAAAAAATAGTTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTGTGCACAGCCCACTGCCCTATAACGAATTAAAAAATAGTTTTC  350

seq1  TTTCTCCTGTAACTCATCGATGGAGCAAATGTTTCAACGTTCCATTTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTGTAACTCATCGATGGAGCAAATGTTTCAACGTTCCATTTAGT  400

seq1  GTGTTCTATTTTTTCATCAATTAAAGATATAAACATTTATATGCATGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTATTTTTTCATCAATTAAAGATATAAACATTTATATGCATGTGT  450

seq1  AGAGTATTAGTAATGTTGATGCTATTGATTTTTGTTACTAATATTAAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTATTAGTAATGTTGATGCTATTGATTTTTGTTACTAATATTAAGAC  500

seq1  AAACTAACATTAACACTATACAATACTTTATTATTTGTTTTCTAAAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAACATTAACACTATACAATACTTTATTATTTGTTTTCTAAAATAG  550

seq1  AATGTGATATAGTAAAATTCTTTTTTCCTTTTATCATTATCTATGTTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATATAGTAAAATTCTTTTTTCCTTTTATCATTATCTATGTTAGA  600

seq1  AAATGTGTCCTATTTAAAGGATTGCAACTTCCATATTCATTTATTATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTCCTATTTAAAGGATTGCAACTTCCATATTCATTTATTATTAT  650

seq1  GTAGGTGGTATGTATGTATGATAT  674
      ||||||||||||||||||||||||
seq2  GTAGGTGGTATGTATGTATGATAT  674


seq1: chr14_102349327_102350440
seq2: B6Ng01-241N07.g_65_1176 (reverse)

seq1  GCATATGTGCCACGGCACAAGTGCAGAGA-TCAGGAGCCAACCTCAGGAA  49
      |||||||||||| ||||| |||||||||| |||| |||  | |||||| |
seq2  GCATATGTGCCA-GGCAC-AGTGCAGAGATTCAGAAGC--AACTCAGGGA  46

seq1  ACTGGTTGGAGGCAAGCACCTTCA-CCCACAGACCCACAG-ACCCA-TCT  96
      ||||||||||||| |||||  ||| ||||||   |||||| ||||| |||
seq2  ACTGGTTGGAGGC-AGCAC--TCACCCCACAAGACCACAGAACCCATTCT  93

seq1  CACAGGCTCTAA-TTTCTTGGCTTTTTAAACTCACAAAACTTCAGTTA-T  144
      |||||||||||| ||||||||||||||||||||||||||||||||||| |
seq2  CACAGGCTCTAATTTTCTTGGCTTTTTAAACTCACAAAACTTCAGTTATT  143

seq1  TTTCTAGTAACTCATACATAATGATATTTAATCTCCTATCACACAATTAT  194
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTCTAGTAACTCATACATAATGATATTTAATCT-CTATCACACAATTAT  192

seq1  GGCATAGTGTATAATTGCAAAATCACAATGGATTTAATAGCACTTTGCAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGTGTATAATTGCAAAATCACAATGGATTTAATAGCACTTTGCAT  242

seq1  TGGTATCTCATAAATGAGCAGTTATATAAGCTGTATAAGATTAAAAGCAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTCATAAATGAGCAGTTATATAAGCTGTATAAGATTAAAAGCAG  292

seq1  TAATAGCTATGTGTGTGAGACATTATGGTGCTGAGAGTGTTTGAGGTGGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCTATGTGTGTGAGACATTATGGTGCTGAGAGTGTTTGAGGTGGT  342

seq1  ATTTTTTGAACACATGGATTCTTCTACCTCTCTTTATAACATGCTATCCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGAACACATGGATTCTTCTACCTCTCTTTATAACATGCTATCCT  392

seq1  AATAGCCAGTGGGTTCATGACCTCCGTATTGGGGTTCTCCACTTTAGAGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCCAGTGGGTTCATGACCTCCGTATTGGGGTTCTCCACTTTAGAGG  442

seq1  ATACAGACACGAATGTTGAATGGGTGATTTATTAACGTCTCCCACCCATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGACACGAATGTTGAATGGGTGATTTATTAACGTCTCCCACCCATG  492

seq1  TACCTCAATATTCTCTTGCTGAAATTTGTCTTTTCTTTGTGCCAAATACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCAATATTCTCTTGCTGAAATTTGTCTTTTCTTTGTGCCAAATACC  542

seq1  AGCTACATATGACAGAGCCCATCTTATTGACTCCAGAGTATTGTGTGTCC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATATGACAGAGCCCATCTTATTGACTCCAGAGTATTGTGTGTCC  592

seq1  CAACAGAATGATGTCAACCACTGGAAGAGCGTGAGAGAACAGCCAGTTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAATGATGTCAACCACTGGAAGAGCGTGAGAGAACAGCCAGTTTC  642

seq1  TAGAACCAGGGATGAGGATTTGAGAATATTTTTTTTTGTTTCCATTTGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCAGGGATGAGGATTTGAGAATATTTTTTTTTGTTTCCATTTGTT  692

seq1  CGTGACATAACGACTACAACCTGGTTTTTTCTTTTTTTATTATGCATAGC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACATAACGACTACAACCTGGTTTTTTCTTTTTTTATTATGCATAGC  742

seq1  TCATAGGGACAGAGGGAATGCAGTTAATATGAAAGGGAAATCTGAATACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGGACAGAGGGAATGCAGTTAATATGAAAGGGAAATCTGAATACA  792

seq1  GTGGCCAAAAGGTATTTCAACCTCTGAAGAAAGCTGTACAGTTGCGATAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCAAAAGGTATTTCAACCTCTGAAGAAAGCTGTACAGTTGCGATAA  842

seq1  GGAAGTAGACATGATGCTAACTCGTGTTTTTTTTTTAATTTATATAAATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAGACATGATGCTAACTCGTGTTTTTTTTTTAATTTATATAAATT  892

seq1  AATAATAAGCTCCAGTTTTCTTACATATGCTTTATTATTTTGTTAGTGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAGCTCCAGTTTTCTTACATATGCTTTATTATTTTGTTAGTGGA  942

seq1  TAAAACTAAGAGCACCTCAGCTGTGAGGGAATGGGCAGAATAGTGAGAAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTAAGAGCACCTCAGCTGTGAGGGAATGGGCAGAATAGTGAGAAG  992

seq1  GAAATAACTCTTGTTTTTCCTCTCCCATGGCTAGCCTGACCTGTAATTTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAACTCTTGTTTTTCCTCTCCCATGGCTAGCCTGACCTGTAATTTA  1042

seq1  TGATTTGGATTCTGGCAGAGCACCCCCAGGGCCATGCAATACCCAGTGTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGGATTCTGGCAGAGCACCCCCAGGGCCATGCAATACCCAGTGTT  1092

seq1  CAGTGGTGTGTAAAGAATTC  1114
      ||||||||||||||||||||
seq2  CAGTGGTGTGTAAAGAATTC  1112


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