BAC Information

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BAC

Clone NameB6Ng01-242B11
Chromosome14 (Build37)
Map Location 99,249,374 - 99,392,881
singlet/doubletdoublet
Overlap genenone
Upstream geneDach1, LOC635593, LOC619716
Downstream geneLOC100043787, 2410129H14Rik, 6720463M24Rik, Dis3, D14Ertd581e, LOC100043395, LOC100043397, Klf5, LOC100043400, LOC100043789, LOC668671, LOC668672, EG546623, Klf12
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242B11.bB6Ng01-242B11.g
ACCGA051834GA051835
length1,0851,102
definitionB6Ng01-242B11.b B6Ng01-242B11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,249,374 - 99,250,462)(99,391,767 - 99,392,881)
sequence
gaattccacaagtgggaagaaaatcaactgttttctgtcctgtcagtatt
tattttgagctgtgtcctcgactgcatagcaccagctcttaattatttag
agaataattgtccatttgtggttgatcaaatcctcttccttctcccatgc
ttcctgcctttggggcatttcactgctcattaatatttgcaccagagacc
agaccttctgcttaaccggtgagtctggtaaaaataaaataaaatatatg
ggtgggctacaagacagaaagcatagactacgcgagctgtaatggccgag
tcagggtctcatccagcaggaatggtttaagtcgatcacaaacgataatg
tgttcatttgtgatttcttggtagagaggcaccactcccttttagccttc
cgtcccactgacatatttttctctaatttgatccttgctgtttggaccac
agatcactggaatttggcaaaagatacagatatctttctgatggagtttg
aaactgctcgagttttttttttttttaactcttcctttctcacccctaga
atcctcaataaatacatctttcatgtattaagagataaatgaaaggcatg
ctctccccaagttatttgtgtgtcggcacataaaatacagcaatcagcgt
cttggtccacgtcccccacccctcaaggatgctcagctctttggagtctg
tctggcagtgtcggattagtgagaggctgagattgcttcatgaatcaggg
agaagctgctcacaggtggcagttaacttgatcttcccagtcagtcaagg
aggatatatatcttttgtgattaccgctctcagggatacccttgaaggaa
aatgagaacgcctcaccaaaacacaactaagagagacaaacaaaacgggg
ccgtgacagggaaagggggctgcggggaaacgtattcaacatctacagaa
atcaaagagtgtggatgtgaactcccttccactgctgcgcgctccaatcc
ccactccagagctgtgctgacacatcaaaactgcactacgcaataagcaa
ggtataaacaaagcaagatccatttagctcgtttc

gaattcagttggaaaatatttcacagaagatgtttgtttatgctcaccaa
atagtttaattttttattatattcttataagactttatattaggggataa
tatttggttcccgagtgagttttgaaacattttttctcttaatattttgt
ggaatagtttaagaactattggtattaaattattttcaaagtttagtgaa
attgttaatacatttagttgagcttttctctgtttagagattatttattt
taaattttattttgctttttgccaacaggtaagacagtaatttttttttt
tggcttttatggattcactgaaatttgatttactaatttatgaatgactt
ttacaatgaacagaaagaaatgaaaaagtttattgtatttggaaatatga
atatttatatttatgtaactcttatttcttgtgttatttaaacctacatc
aacttcttggttgagtttcctaattataagaagcatggaactcaaatgat
tctgtataactaagaaaagaaaccctctgtattttcaatggttaattctg
taccagcagagagctaagtgctggtgggattttggtattgtcatttctgt
ggctcatcactgagttttctgtactgtaaatgtttgtcattcctcacttg
ctaaaggcagtgtaagatgttcagtgctttctcattgctggttggttgta
ataaagagctcattgtaagctgcctgaggccacactaactgggtttctga
gtgggaggctggagctgtatggaaggaaacatcgagagaaataatggagg
ccaagacaggtttctgttcaaggcccttgaagtttactgagagtctgtgc
ttataaagagggtaggcccatcctccgtcagcccattcttggtgcctgga
gccagcccagaggtaatctacagggtgtgtctccagaatgtctcaagacc
tttcagtaggaagcagagtcttgagagagcaatagagcaaatagccatca
ggtcagtatctcttttcttagtggcagcaggtcaaagtctgatcagctgc
tcaagctgagggaggctacagctgacagcatcctggggcaaggaacatga
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_99249374_99250462
seq2: B6Ng01-242B11.b_47_1131

seq1  GAATTCCACAAGTGGGAAGAAAATCAACTGTTTTCTGTCCTGTCAGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAAGTGGGAAGAAAATCAACTGTTTTCTGTCCTGTCAGTATT  50

seq1  TATTTTGAGCTGTGTCCTCGACTGCATAGCACCAGCTCTTAATTATTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAGCTGTGTCCTCGACTGCATAGCACCAGCTCTTAATTATTTAG  100

seq1  AGAATAATTGTCCATTTGTGGTTGATCAAATCCTCTTCCTTCTCCCATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAATTGTCCATTTGTGGTTGATCAAATCCTCTTCCTTCTCCCATGC  150

seq1  TTCCTGCCTTTGGGGCATTTCACTGCTCATTAATATTTGCACCAGAGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCTTTGGGGCATTTCACTGCTCATTAATATTTGCACCAGAGACC  200

seq1  AGACCTTCTGCTTAACCGGTGAGTCTGGTAAAAATAAAATAAAATATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTCTGCTTAACCGGTGAGTCTGGTAAAAATAAAATAAAATATATG  250

seq1  GGTGGGCTACAAGACAGAAAGCATAGACTACGCGAGCTGTAATGGCCGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGCTACAAGACAGAAAGCATAGACTACGCGAGCTGTAATGGCCGAG  300

seq1  TCAGGGTCTCATCCAGCAGGAATGGTTTAAGTCGATCACAAACGATAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGTCTCATCCAGCAGGAATGGTTTAAGTCGATCACAAACGATAATG  350

seq1  TGTTCATTTGTGATTTCTTGGTAGAGAGGCACCACTCCCTTTTAGCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTTGTGATTTCTTGGTAGAGAGGCACCACTCCCTTTTAGCCTTC  400

seq1  CGTCCCACTGACATATTTTTCTCTAATTTGATCCTTGCTGTTTGGACCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCACTGACATATTTTTCTCTAATTTGATCCTTGCTGTTTGGACCAC  450

seq1  AGATCACTGGAATTTGGCAAAAGATACAGATATCTTTCTGATGGAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTGGAATTTGGCAAAAGATACAGATATCTTTCTGATGGAGTTTG  500

seq1  AAACTGCTCGAGTTTTTTTTTTTTTTAACTCTTCCTTTCTCACCCCTAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTCGAGTTTTTTTTTTTTTTAACTCTTCCTTTCTCACCCCTAGA  550

seq1  ATCCTCAATAAATACATCTTTCATGTATTAAGAGATAAATGAAAGGCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAATAAATACATCTTTCATGTATTAAGAGATAAATGAAAGGCATG  600

seq1  CTCTCCCCAAGTTATTTGTGTGTCGGCACATAAAATACAGCAATCAGCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCAAGTTATTTGTGTGTCGGCACATAAAATACAGCAATCAGCGT  650

seq1  CTTGGTCCACGTCCCCCACCCCTCAAGGATGCTCAGCTCTTTGGAGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCCACGTCCCCCACCCCTCAAGGATGCTCAGCTCTTTGGAGTCTG  700

seq1  TCTGGCAGTGTCGGATTAGTGAGAGGCTGAGATTGCTTCATGAATCAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGTGTCGGATTAGTGAGAGGCTGAGATTGCTTCATGAATCAGGG  750

seq1  AGAAGCTGCTCACAGGTGGCAGTTAACTTGATCTTCCCAGTCAGTCAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTGCTCACAGGTGGCAGTTAACTTGATCTTCCCAGTCAGTCAAGG  800

seq1  AGGATATATATCTTTTGTGATTACCGCTCTCAGGGATACCCTTGAAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATATATCTTTTGTGATTACCGCTCTCAGGGATACCCTTGAAGGAA  850

seq1  AATGAGAACGCCTCACCAAAACACAACTAAGAGAGACAAACAAAACGGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAACGCCTCACCAAAACACAACTAAGAGAGACAAACAAAACGGGG  900

seq1  CCGTGACAGGGAAAGGGGGCTGCGGGGAAACGTATTCAACATCTACAGAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGACAGGGAAAGGGGGCTGCGGGGAAACGTATTCAACATCTACAGAA  950

seq1  ATCAAAGAGTGTGGATGTGAACTCCC-TCCACTGCTGCCGCCGCTCCAAT  999
      |||||||||||||||||||||||||| |||||||||||   |||||||||
seq2  ATCAAAGAGTGTGGATGTGAACTCCCTTCCACTGCTGC--GCGCTCCAAT  998

seq1  CCCCACTCCAGAGCTGTGCTGACCACATCAAAACTGCACTACCGCATAAG  1049
      |||||||||||||||||||||| |||||||||||||||||||   |||||
seq2  CCCCACTCCAGAGCTGTGCTGA-CACATCAAAACTGCACTACGCAATAAG  1047

seq1  CAAGGGAATAAACAAAGCAAAGACCCA-TTAGCTCGGTTTC  1089
      ||| || ||||||||||| |||| ||| ||||||| |||||
seq2  CAA-GGTATAAACAAAGC-AAGATCCATTTAGCTC-GTTTC  1085


seq1: chr14_99391767_99392881
seq2: B6Ng01-242B11.g_69_1170 (reverse)

seq1  CCTCATGTTCC-TGCCCCAGGGATTGCTTGTCAGCTGTAGCCTCCCTCAG  49
      ||||||||||| |||||||||   ||| ||||||||||||||||||||||
seq2  CCTCATGTTCCTTGCCCCAGG--ATGC-TGTCAGCTGTAGCCTCCCTCAG  47

seq1  CCTTGAAGCAGGCTGATCCAGACTTTGACCTTGCTGCCACTAAG-AAAGA  98
       |||| |||| |||||| |||||||||||| ||||||||||||| |||||
seq2  -CTTG-AGCA-GCTGAT-CAGACTTTGACC-TGCTGCCACTAAGAAAAGA  92

seq1  GATTACCTGACCTTGATGGCTATTTGCTCTATTTGCTCTTCTCCAAGACT  148
      |||   |||||| |||||||||||||||||| |||||| ||| |||||||
seq2  GAT--ACTGACC-TGATGGCTATTTGCTCTA-TTGCTC-TCT-CAAGACT  136

seq1  CTGCTTCCTACTGAAAGGTCTTTGAGACATTCTGGAGACACACCCTGTAG  198
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGCTTCCTACTGAAAGGTC-TTGAGACATTCTGGAGACACACCCTGTAG  185

seq1  ATTACCTCTGGGCTGGCTCCAGGCACCAAGAATGGGCTGACGGAGGATGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTCTGGGCTGGCTCCAGGCACCAAGAATGGGCTGACGGAGGATGG  235

seq1  GCCTACCCTCTTTATAAGCACAGACTCTCAGTAAACTTCAAGGGCCTTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCCTCTTTATAAGCACAGACTCTCAGTAAACTTCAAGGGCCTTGA  285

seq1  ACAGAAACCTGTCTTGGCCTCCATTATTTCTCTCGATGTTTCCTTCCATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACCTGTCTTGGCCTCCATTATTTCTCTCGATGTTTCCTTCCATA  335

seq1  CAGCTCCAGCCTCCCACTCAGAAACCCAGTTAGTGTGGCCTCAGGCAGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGCCTCCCACTCAGAAACCCAGTTAGTGTGGCCTCAGGCAGCT  385

seq1  TACAATGAGCTCTTTATTACAACCAACCAGCAATGAGAAAGCACTGAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGAGCTCTTTATTACAACCAACCAGCAATGAGAAAGCACTGAACA  435

seq1  TCTTACACTGCCTTTAGCAAGTGAGGAATGACAAACATTTACAGTACAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACACTGCCTTTAGCAAGTGAGGAATGACAAACATTTACAGTACAGA  485

seq1  AAACTCAGTGATGAGCCACAGAAATGACAATACCAAAATCCCACCAGCAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGTGATGAGCCACAGAAATGACAATACCAAAATCCCACCAGCAC  535

seq1  TTAGCTCTCTGCTGGTACAGAATTAACCATTGAAAATACAGAGGGTTTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCTCTGCTGGTACAGAATTAACCATTGAAAATACAGAGGGTTTCT  585

seq1  TTTCTTAGTTATACAGAATCATTTGAGTTCCATGCTTCTTATAATTAGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAGTTATACAGAATCATTTGAGTTCCATGCTTCTTATAATTAGGA  635

seq1  AACTCAACCAAGAAGTTGATGTAGGTTTAAATAACACAAGAAATAAGAGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAACCAAGAAGTTGATGTAGGTTTAAATAACACAAGAAATAAGAGT  685

seq1  TACATAAATATAAATATTCATATTTCCAAATACAATAAACTTTTTCATTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAATATAAATATTCATATTTCCAAATACAATAAACTTTTTCATTT  735

seq1  CTTTCTGTTCATTGTAAAAGTCATTCATAAATTAGTAAATCAAATTTCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTCATTGTAAAAGTCATTCATAAATTAGTAAATCAAATTTCAG  785

seq1  TGAATCCATAAAAGCCAAAAAAAAAAATTACTGTCTTACCTGTTGGCAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCATAAAAGCCAAAAAAAAAAATTACTGTCTTACCTGTTGGCAAA  835

seq1  AAGCAAAATAAAATTTAAAATAAATAATCTCTAAACAGAGAAAAGCTCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAATAAAATTTAAAATAAATAATCTCTAAACAGAGAAAAGCTCAA  885

seq1  CTAAATGTATTAACAATTTCACTAAACTTTGAAAATAATTTAATACCAAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTATTAACAATTTCACTAAACTTTGAAAATAATTTAATACCAAT  935

seq1  AGTTCTTAAACTATTCCACAAAATATTAAGAGAAAAAATGTTTCAAAACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTAAACTATTCCACAAAATATTAAGAGAAAAAATGTTTCAAAACT  985

seq1  CACTCGGGAACCAAATATTATCCCCTAATATAAAGTCTTATAAGAATATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCGGGAACCAAATATTATCCCCTAATATAAAGTCTTATAAGAATATA  1035

seq1  ATAAAAAATTAAACTATTTGGTGAGCATAAACAAACATCTTCTGTGAAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAATTAAACTATTTGGTGAGCATAAACAAACATCTTCTGTGAAAT  1085

seq1  ATTTTCCAACTGAATTC  1115
      |||||||||||||||||
seq2  ATTTTCCAACTGAATTC  1102


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